RNA–Protein interactions for RNA: ENST00000423311.1

LINC01399-201, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

TSL 3 BASIC

Gene LINC01399, Length 648 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-201ENST00000423311 TULP4Q9NRJ4 1543 aa12.59□□□□□ -0.39
LINC01399-201ENST00000423311 AMOTL2Q9Y2J4 779 aa12.59□□□□□ -0.39
LINC01399-201ENST00000423311 NWD1Q149M9 1564 aa12.59□□□□□ -0.39
LINC01399-201ENST00000423311 NCKAP5LQ9HCH0 1330 aa12.59□□□□□ -0.39
LINC01399-201ENST00000423311 ROBO2Q9HCK4 1378 aa12.57□□□□□ -0.4
LINC01399-201ENST00000423311 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.57□□□□□ -0.4
LINC01399-201ENST00000423311 WAPLQ7Z5K2 1190 aa12.56□□□□□ -0.4
LINC01399-201ENST00000423311 PLEKHH1Q9ULM0 1364 aa12.56□□□□□ -0.4
LINC01399-201ENST00000423311 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
LINC01399-201ENST00000423311 KCNA6P17658 529 aa12.55□□□□□ -0.4
LINC01399-201ENST00000423311 HSPA2P54652 639 aa12.55□□□□□ -0.4
LINC01399-201ENST00000423311 ATAD2Q6PL18 1390 aa12.55□□□□□ -0.4
LINC01399-201ENST00000423311 NKTRP30414 1462 aaKnown RBP12.54□□□□□ -0.4
LINC01399-201ENST00000423311 SAFB2Q14151 953 aaKnown RBP eCLIP12.54□□□□□ -0.4
LINC01399-201ENST00000423311 POLR3GLQ9BT43 218 aa12.54□□□□□ -0.4
LINC01399-201ENST00000423311 MINK1Q8N4C8 1332 aaPredicted RBP12.54□□□□□ -0.4
LINC01399-201ENST00000423311 DMRT2Q9Y5R5 561 aa12.52□□□□□ -0.41
LINC01399-201ENST00000423311 ITSN1Q15811 1721 aa12.51□□□□□ -0.41
LINC01399-201ENST00000423311 NALCNQ8IZF0 1738 aa12.51□□□□□ -0.41
LINC01399-201ENST00000423311 STRCP1A6NGW2 1772 aa12.51□□□□□ -0.41
LINC01399-201ENST00000423311 WASLO00401 505 aaPredicted RBP12.51□□□□□ -0.41
LINC01399-201ENST00000423311 SRPK2P78362 688 aaKnown RBP12.51□□□□□ -0.41
LINC01399-201ENST00000423311 CDK19Q9BWU1 502 aa12.51□□□□□ -0.41
LINC01399-201ENST00000423311 ANP32CO43423 234 aa12.5□□□□□ -0.41
LINC01399-201ENST00000423311 NCOA3Q9Y6Q9 1424 aa12.5□□□□□ -0.41
LINC01399-201ENST00000423311 CDC42BPGQ6DT37 1551 aa12.5□□□□□ -0.41
LINC01399-201ENST00000423311 TOPAZ1Q8N9V7 1692 aa12.5□□□□□ -0.41
LINC01399-201ENST00000423311 FMN2Q9NZ56 1722 aa12.5□□□□□ -0.41
LINC01399-201ENST00000423311 USP32Q8NFA0 1604 aa12.49□□□□□ -0.41
LINC01399-201ENST00000423311 KTN1Q86UP2 1357 aaKnown RBP12.49□□□□□ -0.41
LINC01399-201ENST00000423311 PER1O15534 1290 aaPredicted RBP12.49□□□□□ -0.41
LINC01399-201ENST00000423311 PANK3Q9H999 370 aa12.49□□□□□ -0.41
LINC01399-201ENST00000423311 ADGRL3Q9HAR2 1447 aa12.48□□□□□ -0.41
LINC01399-201ENST00000423311 MIER1Q8N108 512 aa12.48□□□□□ -0.41
LINC01399-201ENST00000423311 CABP2Q9NPB3 220 aa12.48□□□□□ -0.41
LINC01399-201ENST00000423311 ATP7BP35670 1465 aa12.47□□□□□ -0.41
LINC01399-201ENST00000423311 ANKRD36BQ8N2N9 1353 aa12.47□□□□□ -0.41
LINC01399-201ENST00000423311 NPC1L1Q9UHC9 1359 aa12.47□□□□□ -0.41
LINC01399-201ENST00000423311 ANKARQ7Z5J8 1434 aa12.46□□□□□ -0.41
LINC01399-201ENST00000423311 RGPD8O14715 1765 aaPredicted RBP12.46□□□□□ -0.41
LINC01399-201ENST00000423311 AKAP12Q02952 1782 aa12.46□□□□□ -0.41
LINC01399-201ENST00000423311 TMC1Q8TDI8 760 aa12.45□□□□□ -0.42
LINC01399-201ENST00000423311 SLC12A5Q9H2X9 1139 aa12.45□□□□□ -0.42
LINC01399-201ENST00000423311 TERF2IPQ9NYB0 399 aa12.45□□□□□ -0.42
LINC01399-201ENST00000423311 KNSTRNQ9Y448 316 aa12.45□□□□□ -0.42
LINC01399-201ENST00000423311 CCDC61Q9Y6R9 512 aa12.45□□□□□ -0.42
LINC01399-201ENST00000423311 XIRP1Q702N8 1843 aaKnown RBP12.45□□□□□ -0.42
LINC01399-201ENST00000423311 PROSER2Q86WR7 435 aaPredicted RBP12.44□□□□□ -0.42
LINC01399-201ENST00000423311 NUDT16Q96DE0 195 aaKnown RBP12.44□□□□□ -0.42
LINC01399-201ENST00000423311 PRKRIP1Q9H875 184 aaPredicted RBP12.44□□□□□ -0.42
LINC01399-201ENST00000423311 MON2Q7Z3U7 1717 aa12.44□□□□□ -0.42
LINC01399-201ENST00000423311 CD163L1Q9NR16 1453 aa12.44□□□□□ -0.42
LINC01399-201ENST00000423311 DCCP43146 1447 aa12.44□□□□□ -0.42
LINC01399-201ENST00000423311 PPIP5K1Q6PFW1 1433 aa12.44□□□□□ -0.42
LINC01399-201ENST00000423311 CCER2I3L3R5 266 aa12.43□□□□□ -0.42
LINC01399-201ENST00000423311 RALBP1Q15311 655 aa12.43□□□□□ -0.42
LINC01399-201ENST00000423311 CPSF1Q10570 1443 aaKnown RBP12.43□□□□□ -0.42
LINC01399-201ENST00000423311 A0A1W2PP64 1363 aa12.43□□□□□ -0.42
LINC01399-201ENST00000423311 PLEKHG3A1L390 1219 aa12.42□□□□□ -0.42
LINC01399-201ENST00000423311 HDGFL2Q7Z4V5 671 aaPredicted RBP12.42□□□□□ -0.42
LINC01399-201ENST00000423311 CABP1Q9NZU7 370 aa12.42□□□□□ -0.42
LINC01399-201ENST00000423311 ANKRD26Q9UPS8 1709 aa12.42□□□□□ -0.42
LINC01399-201ENST00000423311 KIF20BQ96Q89 1820 aa12.41□□□□□ -0.42
LINC01399-201ENST00000423311 PRR36Q9H6K5 1346 aa12.41□□□□□ -0.42
LINC01399-201ENST00000423311 AMER1Q5JTC6 1135 aaPredicted RBP12.41□□□□□ -0.42
LINC01399-201ENST00000423311 ZNF692Q9BU19 519 aaPredicted RBP12.41□□□□□ -0.42
LINC01399-201ENST00000423311 CARD14Q9BXL6 1004 aa12.41□□□□□ -0.42
LINC01399-201ENST00000423311 NSD3Q9BZ95 1437 aa12.41□□□□□ -0.42
LINC01399-201ENST00000423311 C19orf44Q9H6X5 657 aa12.41□□□□□ -0.42
LINC01399-201ENST00000423311 NSD2O96028 1365 aa12.41□□□□□ -0.42
LINC01399-201ENST00000423311 PARD3Q8TEW0 1356 aa12.41□□□□□ -0.42
LINC01399-201ENST00000423311 LRRC7Q96NW7 1537 aa12.4□□□□□ -0.42
LINC01399-201ENST00000423311 TMEM94Q12767 1356 aa12.4□□□□□ -0.42
LINC01399-201ENST00000423311 CGNL1Q0VF96 1302 aa12.39□□□□□ -0.43
LINC01399-201ENST00000423311 EDC4Q6P2E9 1401 aaKnown RBP12.39□□□□□ -0.43
LINC01399-201ENST00000423311 C14orf37Q86TY3 774 aa12.39□□□□□ -0.43
LINC01399-201ENST00000423311 POLR3AO14802 1390 aaPredicted RBP12.39□□□□□ -0.43
LINC01399-201ENST00000423311 NRKQ7Z2Y5 1582 aa12.39□□□□□ -0.43
LINC01399-201ENST00000423311 KIF1AQ12756 1690 aa12.38□□□□□ -0.43
LINC01399-201ENST00000423311 ZNF335Q9H4Z2 1342 aaPredicted RBP12.37□□□□□ -0.43
LINC01399-201ENST00000423311 BRD4O60885 1362 aaPredicted RBP12.37□□□□□ -0.43
LINC01399-201ENST00000423311 MSH6P52701 1360 aa12.37□□□□□ -0.43
LINC01399-201ENST00000423311 MYBBP1AQ9BQG0 1328 aaKnown RBP12.37□□□□□ -0.43
LINC01399-201ENST00000423311 ACEP12821 1306 aa12.36□□□□□ -0.43
LINC01399-201ENST00000423311 ATF3P18847 181 aa12.35□□□□□ -0.43
LINC01399-201ENST00000423311 CC2D1BQ5T0F9 858 aaKnown RBP12.35□□□□□ -0.43
LINC01399-201ENST00000423311 CADPS2Q86UW7 1296 aa12.35□□□□□ -0.43
LINC01399-201ENST00000423311 RBM33Q96EV2 1170 aaKnown RBP12.35□□□□□ -0.43
LINC01399-201ENST00000423311 USP6P35125 1406 aa12.35□□□□□ -0.43
LINC01399-201ENST00000423311 NUTM2FA1L443 756 aa12.34□□□□□ -0.43
LINC01399-201ENST00000423311 MST1RQ04912 1400 aa12.34□□□□□ -0.43
LINC01399-201ENST00000423311 C1orf167Q5SNV9 1468 aa12.34□□□□□ -0.43
LINC01399-201ENST00000423311 LTBP4Q8N2S1 1624 aa12.33□□□□□ -0.43
LINC01399-201ENST00000423311 USP54Q70EL1 1684 aa12.33□□□□□ -0.44
LINC01399-201ENST00000423311 NLRP13Q86W25 1043 aa12.33□□□□□ -0.44
LINC01399-201ENST00000423311 SSH2Q76I76 1423 aa12.33□□□□□ -0.44
LINC01399-201ENST00000423311 TTC21AQ8NDW8 1320 aa12.33□□□□□ -0.44
LINC01399-201ENST00000423311 FYB1O15117 783 aa12.32□□□□□ -0.44
LINC01399-201ENST00000423311 NGDNQ8NEJ9 315 aaKnown RBP12.32□□□□□ -0.44
LINC01399-201ENST00000423311 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms