RNA–Protein interactions for RNA: ENST00000422669.1

LTBP1-208, Transcript of latent transforming growth factor beta binding protein 1, human

TSL 5

Gene LTBP1, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP1-208	ENST00000422669	NHSL1	Q5SYE7	1610 aa		13.64	□□□□□ -0.23
LTBP1-208	ENST00000422669	NALCN	Q8IZF0	1738 aa		13.64	□□□□□ -0.23
LTBP1-208	ENST00000422669	KIF1B	O60333	1816 aa		13.64	□□□□□ -0.23
LTBP1-208	ENST00000422669	NEXMIF	Q5QGS0	1516 aa		13.64	□□□□□ -0.23
LTBP1-208	ENST00000422669	DCC	P43146	1447 aa		13.64	□□□□□ -0.23
LTBP1-208	ENST00000422669	MET	P08581	1390 aa		13.63	□□□□□ -0.23
LTBP1-208	ENST00000422669	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.63	□□□□□ -0.23
LTBP1-208	ENST00000422669	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.62	□□□□□ -0.23
LTBP1-208	ENST00000422669	NUTM2E	B1AL46	878 aa	Predicted RBP	13.62	□□□□□ -0.23
LTBP1-208	ENST00000422669	HRC	P23327	699 aa		13.62	□□□□□ -0.23
LTBP1-208	ENST00000422669	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.62	□□□□□ -0.23
LTBP1-208	ENST00000422669	TRIM52	Q96A61	297 aa		13.62	□□□□□ -0.23
LTBP1-208	ENST00000422669	MST1R	Q04912	1400 aa		13.62	□□□□□ -0.23
LTBP1-208	ENST00000422669	ZNF772	Q68DY9	489 aa	Predicted RBP	13.61	□□□□□ -0.23
LTBP1-208	ENST00000422669	SETD5	Q9C0A6	1442 aa		13.6	□□□□□ -0.23
LTBP1-208	ENST00000422669	ADGRL3	Q9HAR2	1447 aa		13.59	□□□□□ -0.23
LTBP1-208	ENST00000422669	DDX17	Q92841	729 aa	Known RBP	13.59	□□□□□ -0.23
LTBP1-208	ENST00000422669	AFF2	P51816	1311 aa		13.56	□□□□□ -0.24
LTBP1-208	ENST00000422669	RXRB	P28702	533 aa		13.55	□□□□□ -0.24
LTBP1-208	ENST00000422669	BBX	Q8WY36	941 aa	Predicted RBP	13.55	□□□□□ -0.24
LTBP1-208	ENST00000422669	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
LTBP1-208	ENST00000422669	PPL	O60437	1756 aa		13.54	□□□□□ -0.24
LTBP1-208	ENST00000422669	NBR1	Q14596	966 aa		13.54	□□□□□ -0.24
LTBP1-208	ENST00000422669	LRRC59	Q96AG4	307 aa	Known RBP	13.54	□□□□□ -0.24
LTBP1-208	ENST00000422669	PNPLA6	Q8IY17	1366 aa		13.54	□□□□□ -0.24
LTBP1-208	ENST00000422669	RAB3GAP2	Q9H2M9	1393 aa		13.54	□□□□□ -0.24
LTBP1-208	ENST00000422669	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.53	□□□□□ -0.24
LTBP1-208	ENST00000422669	C8orf37	Q96NL8	207 aa		13.53	□□□□□ -0.24
LTBP1-208	ENST00000422669	RNF216	Q9NWF9	866 aa	Predicted RBP	13.53	□□□□□ -0.24
LTBP1-208	ENST00000422669	FBXO3	Q9UK99	471 aa		13.53	□□□□□ -0.24
LTBP1-208	ENST00000422669	ROBO2	Q9HCK4	1378 aa		13.53	□□□□□ -0.24
LTBP1-208	ENST00000422669	C1orf167	Q5SNV9	1468 aa		13.53	□□□□□ -0.24
LTBP1-208	ENST00000422669	CDK12	Q9NYV4	1490 aa	Predicted RBP	13.53	□□□□□ -0.24
LTBP1-208	ENST00000422669	LAMC1	P11047	1609 aa		13.53	□□□□□ -0.24
LTBP1-208	ENST00000422669	PTCH1	Q13635	1447 aa		13.52	□□□□□ -0.25
LTBP1-208	ENST00000422669	RGS12	O14924	1447 aa		13.5	□□□□□ -0.25
LTBP1-208	ENST00000422669	ADAMTS2	O95450	1211 aa		13.5	□□□□□ -0.25
LTBP1-208	ENST00000422669	ORAI2	Q96SN7	254 aa		13.5	□□□□□ -0.25
LTBP1-208	ENST00000422669	PCGF6	Q9BYE7	350 aa		13.5	□□□□□ -0.25
LTBP1-208	ENST00000422669	VGF	O15240	615 aa	Predicted RBP	13.49	□□□□□ -0.25
LTBP1-208	ENST00000422669	SRCAP	Q6ZRS2	3230 aa		13.49	□□□□□ -0.25
LTBP1-208	ENST00000422669	CFAP44	Q96MT7	982 aa		13.48	□□□□□ -0.25
LTBP1-208	ENST00000422669	QTRT2	Q9H974	415 aa	Known RBP	13.48	□□□□□ -0.25
LTBP1-208	ENST00000422669	PRAG1	Q86YV5	1406 aa		13.47	□□□□□ -0.25
LTBP1-208	ENST00000422669	C1QBP	Q07021	282 aa	Known RBP	13.47	□□□□□ -0.25
LTBP1-208	ENST00000422669	NGLY1	Q96IV0	654 aa		13.47	□□□□□ -0.25
LTBP1-208	ENST00000422669	EP400	Q96L91	3159 aa		13.46	□□□□□ -0.25
LTBP1-208	ENST00000422669	SOS2	Q07890	1332 aa	Predicted RBP	13.46	□□□□□ -0.25
LTBP1-208	ENST00000422669	RBM6	P78332	1123 aa	Known RBP	13.46	□□□□□ -0.25
LTBP1-208	ENST00000422669	CDC42BPG	Q6DT37	1551 aa		13.45	□□□□□ -0.26
LTBP1-208	ENST00000422669	RPGRIP1L	Q68CZ1	1315 aa		13.45	□□□□□ -0.26
LTBP1-208	ENST00000422669	IFT172	Q9UG01	1749 aa		13.45	□□□□□ -0.26
LTBP1-208	ENST00000422669	MYCN	P04198	464 aa	Predicted RBP	13.45	□□□□□ -0.26
LTBP1-208	ENST00000422669	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.45	□□□□□ -0.26
LTBP1-208	ENST00000422669	MARF1	Q9Y4F3	1742 aa	Known RBP	13.43	□□□□□ -0.26
LTBP1-208	ENST00000422669	ADGRF5	Q8IZF2	1346 aa		13.42	□□□□□ -0.26
LTBP1-208	ENST00000422669	ESCO1	Q5FWF5	840 aa		13.42	□□□□□ -0.26
LTBP1-208	ENST00000422669	USP21	Q9UK80	565 aa		13.42	□□□□□ -0.26
LTBP1-208	ENST00000422669	PXDN	Q92626	1479 aa		13.42	□□□□□ -0.26
LTBP1-208	ENST00000422669	CCDC144A	A2RUR9	1427 aa		13.41	□□□□□ -0.26
LTBP1-208	ENST00000422669	XPC	Q01831	940 aa	Predicted RBP	13.41	□□□□□ -0.26
LTBP1-208	ENST00000422669	STK26	Q9P289	416 aa		13.41	□□□□□ -0.26
LTBP1-208	ENST00000422669	KNDC1	Q76NI1	1749 aa		13.41	□□□□□ -0.26
LTBP1-208	ENST00000422669	MYOM2	P54296	1465 aa		13.41	□□□□□ -0.26
LTBP1-208	ENST00000422669	NUTM2F	A1L443	756 aa		13.4	□□□□□ -0.26
LTBP1-208	ENST00000422669	RGL3	Q3MIN7	710 aa		13.4	□□□□□ -0.26
LTBP1-208	ENST00000422669	NPHP3	Q7Z494	1330 aa		13.39	□□□□□ -0.27
LTBP1-208	ENST00000422669	SPATA31E1	Q6ZUB1	1445 aa		13.39	□□□□□ -0.27
LTBP1-208	ENST00000422669	FOXO3	O43524	673 aa		13.39	□□□□□ -0.27
LTBP1-208	ENST00000422669	SLC4A2	P04920	1241 aa		13.39	□□□□□ -0.27
LTBP1-208	ENST00000422669	WAPL	Q7Z5K2	1190 aa		13.39	□□□□□ -0.27
LTBP1-208	ENST00000422669	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.39	□□□□□ -0.27
LTBP1-208	ENST00000422669	TRPC5	Q9UL62	973 aa	Predicted RBP	13.39	□□□□□ -0.27
LTBP1-208	ENST00000422669	FMN2	Q9NZ56	1722 aa		13.39	□□□□□ -0.27
LTBP1-208	ENST00000422669	RGPD8	O14715	1765 aa	Predicted RBP	13.38	□□□□□ -0.27
LTBP1-208	ENST00000422669	DHX57	Q6P158	1386 aa	Known RBP	13.38	□□□□□ -0.27
LTBP1-208	ENST00000422669	ATAD2	Q6PL18	1390 aa		13.38	□□□□□ -0.27
LTBP1-208	ENST00000422669	TMEM132E	Q6IEE7	984 aa		13.38	□□□□□ -0.27
LTBP1-208	ENST00000422669	NPM2	Q86SE8	214 aa	Known RBP	13.38	□□□□□ -0.27
LTBP1-208	ENST00000422669	KLHL34	Q8N239	644 aa		13.38	□□□□□ -0.27
LTBP1-208	ENST00000422669	TECPR2	O15040	1411 aa		13.38	□□□□□ -0.27
LTBP1-208	ENST00000422669	ATRN	O75882	1429 aa		13.38	□□□□□ -0.27
LTBP1-208	ENST00000422669	LRPPRC	P42704	1394 aa	Known RBP	13.37	□□□□□ -0.27
LTBP1-208	ENST00000422669	PLEKHH1	Q9ULM0	1364 aa		13.37	□□□□□ -0.27
LTBP1-208	ENST00000422669	MPHOSPH9	Q99550	1183 aa		13.37	□□□□□ -0.27
LTBP1-208	ENST00000422669	TSHZ2	Q9NRE2	1034 aa		13.37	□□□□□ -0.27
LTBP1-208	ENST00000422669	ANKRD30B	Q9BXX2	1392 aa		13.36	□□□□□ -0.27
LTBP1-208	ENST00000422669	KIF1A	Q12756	1690 aa		13.36	□□□□□ -0.27
LTBP1-208	ENST00000422669	PIK3C2G	O75747	1445 aa		13.36	□□□□□ -0.27
LTBP1-208	ENST00000422669	CLSPN	Q9HAW4	1339 aa		13.36	□□□□□ -0.27
LTBP1-208	ENST00000422669	BCL9L	Q86UU0	1499 aa		13.36	□□□□□ -0.27
LTBP1-208	ENST00000422669	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.35	□□□□□ -0.27
LTBP1-208	ENST00000422669	ABCC11	Q96J66	1382 aa		13.34	□□□□□ -0.27
LTBP1-208	ENST00000422669	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.34	□□□□□ -0.27
LTBP1-208	ENST00000422669	USP32	Q8NFA0	1604 aa		13.32	□□□□□ -0.28
LTBP1-208	ENST00000422669	VASP	P50552	380 aa	Predicted RBP	13.32	□□□□□ -0.28
LTBP1-208	ENST00000422669	BRWD3	Q6RI45	1802 aa		13.32	□□□□□ -0.28
LTBP1-208	ENST00000422669	GLI3	P10071	1580 aa		13.31	□□□□□ -0.28
LTBP1-208	ENST00000422669	SPATA31A3	Q5VYP0	1347 aa		13.31	□□□□□ -0.28
LTBP1-208	ENST00000422669	ABCA3	Q99758	1704 aa		13.3	□□□□□ -0.28

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