RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 WNT7AO00755 349 aa11.44□□□□□ -0.58
SFXN1-202ENST00000421887 RBM26Q5T8P6 1007 aaKnown RBP11.44□□□□□ -0.58
SFXN1-202ENST00000421887 RNF19BQ6ZMZ0 732 aa11.44□□□□□ -0.58
SFXN1-202ENST00000421887 SALL2Q9Y467 1007 aaPredicted RBP11.44□□□□□ -0.58
SFXN1-202ENST00000421887 P3H3Q8IVL6 736 aa11.43□□□□□ -0.58
SFXN1-202ENST00000421887 J3QL48 77 aa11.42□□□□□ -0.58
SFXN1-202ENST00000421887 TERTO14746 1132 aaKnown RBP11.42□□□□□ -0.58
SFXN1-202ENST00000421887 GNPATO15228 680 aa11.42□□□□□ -0.58
SFXN1-202ENST00000421887 SULF1Q8IWU6 871 aa11.42□□□□□ -0.58
SFXN1-202ENST00000421887 MRGPRX2Q96LB1 330 aa11.42□□□□□ -0.58
SFXN1-202ENST00000421887 TRIM32Q13049 653 aa11.41□□□□□ -0.58
SFXN1-202ENST00000421887 MSS51Q4VC12 460 aa11.41□□□□□ -0.58
SFXN1-202ENST00000421887 RTN4Q9NQC3 1192 aaKnown RBP11.41□□□□□ -0.58
SFXN1-202ENST00000421887 SENP2Q9HC62 589 aa11.4□□□□□ -0.58
SFXN1-202ENST00000421887 GRIPAP1Q4V328 841 aa11.39□□□□□ -0.59
SFXN1-202ENST00000421887 LCE2CQ5TA81 110 aa11.39□□□□□ -0.59
SFXN1-202ENST00000421887 TRIM47Q96LD4 638 aa11.39□□□□□ -0.59
SFXN1-202ENST00000421887 HPS1Q92902 700 aa11.37□□□□□ -0.59
SFXN1-202ENST00000421887 PHOX2BQ99453 314 aa11.35□□□□□ -0.59
SFXN1-202ENST00000421887 Q3C1V9 767 aa11.34□□□□□ -0.59
SFXN1-202ENST00000421887 CCDC24Q8N4L8 307 aa11.34□□□□□ -0.59
SFXN1-202ENST00000421887 SMYD5Q6GMV2 418 aa11.33□□□□□ -0.6
SFXN1-202ENST00000421887 KIFC2Q96AC6 838 aa11.33□□□□□ -0.6
SFXN1-202ENST00000421887 REPIN1Q9BWE0 567 aaKnown RBP11.33□□□□□ -0.6
SFXN1-202ENST00000421887 MMP16P51512 607 aa11.32□□□□□ -0.6
SFXN1-202ENST00000421887 TESPA1A2RU30 521 aaPredicted RBP11.3□□□□□ -0.6
SFXN1-202ENST00000421887 GPR37O15354 613 aa11.3□□□□□ -0.6
SFXN1-202ENST00000421887 RC3H1Q5TC82 1133 aaKnown RBP11.3□□□□□ -0.6
SFXN1-202ENST00000421887 USB1Q9BQ65 265 aaKnown RBP11.3□□□□□ -0.6
SFXN1-202ENST00000421887 SLC16A10Q8TF71 515 aa11.29□□□□□ -0.6
SFXN1-202ENST00000421887 FAM181BA6NEQ2 426 aa11.27□□□□□ -0.61
SFXN1-202ENST00000421887 ALDH1A1P00352 501 aa11.27□□□□□ -0.61
SFXN1-202ENST00000421887 SKOR1P84550 965 aa11.27□□□□□ -0.61
SFXN1-202ENST00000421887 DXOO77932 396 aaKnown RBP11.26□□□□□ -0.61
SFXN1-202ENST00000421887 CCDC180Q9P1Z9 1646 aa11.26□□□□□ -0.61
SFXN1-202ENST00000421887 NXF1Q9UBU9 619 aaKnown RBP11.24□□□□□ -0.61
SFXN1-202ENST00000421887 KDM4AO75164 1064 aa11.23□□□□□ -0.61
SFXN1-202ENST00000421887 WNT7BP56706 349 aa11.23□□□□□ -0.61
SFXN1-202ENST00000421887 CD46P15529 392 aa11.22□□□□□ -0.61
SFXN1-202ENST00000421887 HLA-CQ95604 372 aa11.22□□□□□ -0.61
SFXN1-202ENST00000421887 BMP1P13497 986 aa11.21□□□□□ -0.61
SFXN1-202ENST00000421887 GMPRP36959 345 aa11.21□□□□□ -0.61
SFXN1-202ENST00000421887 VEGFBP49765 207 aa11.2□□□□□ -0.62
SFXN1-202ENST00000421887 GPIHBP1Q8IV16 184 aa11.19□□□□□ -0.62
SFXN1-202ENST00000421887 ZSCAN1Q8NBB4 408 aa11.19□□□□□ -0.62
SFXN1-202ENST00000421887 IRF7Q92985 503 aa11.18□□□□□ -0.62
SFXN1-202ENST00000421887 WASF2Q9Y6W5 498 aa11.18□□□□□ -0.62
SFXN1-202ENST00000421887 CAPN5O15484 640 aaPredicted RBP11.17□□□□□ -0.62
SFXN1-202ENST00000421887 EHBP1Q8NDI1 1231 aa11.17□□□□□ -0.62
SFXN1-202ENST00000421887 TRIM46Q7Z4K8 759 aa11.16□□□□□ -0.62
SFXN1-202ENST00000421887 USP46P62068 366 aa11.15□□□□□ -0.62
SFXN1-202ENST00000421887 GUCA2AQ02747 115 aa11.15□□□□□ -0.62
SFXN1-202ENST00000421887 SYMPKQ92797 1274 aaKnown RBP11.15□□□□□ -0.62
SFXN1-202ENST00000421887 SIAH2O43255 324 aa11.13□□□□□ -0.63
SFXN1-202ENST00000421887 HOXA2O43364 376 aa11.13□□□□□ -0.63
SFXN1-202ENST00000421887 JUNDP17535 347 aa11.13□□□□□ -0.63
SFXN1-202ENST00000421887 LORP23490 312 aaPredicted RBP11.12□□□□□ -0.63
SFXN1-202ENST00000421887 MDM2Q00987 491 aaPredicted RBP11.12□□□□□ -0.63
SFXN1-202ENST00000421887 PTCRAQ6ISU1 281 aaPredicted RBP11.12□□□□□ -0.63
SFXN1-202ENST00000421887 NPAS3Q8IXF0 933 aa11.12□□□□□ -0.63
SFXN1-202ENST00000421887 NUDT12Q9BQG2 462 aa11.12□□□□□ -0.63
SFXN1-202ENST00000421887 ERBB4Q15303 1308 aa11.09□□□□□ -0.63
SFXN1-202ENST00000421887 H3BM21 787 aa11.09□□□□□ -0.63
SFXN1-202ENST00000421887 ZFP42Q96MM3 310 aa11.08□□□□□ -0.64
SFXN1-202ENST00000421887 MAP2K5Q13163 448 aa11.07□□□□□ -0.64
SFXN1-202ENST00000421887 SH3BP2P78314 561 aa11.06□□□□□ -0.64
SFXN1-202ENST00000421887 RETREG3Q86VR2 466 aa11.05□□□□□ -0.64
SFXN1-202ENST00000421887 NUTM1Q86Y26 1132 aa11.04□□□□□ -0.64
SFXN1-202ENST00000421887 IRF6O14896 467 aa11.03□□□□□ -0.64
SFXN1-202ENST00000421887 TLL2Q9Y6L7 1015 aa11.03□□□□□ -0.64
SFXN1-202ENST00000421887 C6orf229H3BNL8 230 aa11.02□□□□□ -0.65
SFXN1-202ENST00000421887 LINC01559Q495D7 138 aa11.02□□□□□ -0.65
SFXN1-202ENST00000421887 LOC100996750A0A140TA64 210 aa11.01□□□□□ -0.65
SFXN1-202ENST00000421887 CCNYL3P0C7X3 344 aa11.01□□□□□ -0.65
SFXN1-202ENST00000421887 MS4A1P11836 297 aa11.01□□□□□ -0.65
SFXN1-202ENST00000421887 KRTAP4-6Q9BYQ5 205 aa11.01□□□□□ -0.65
SFXN1-202ENST00000421887 SCARF1Q14162 830 aa11□□□□□ -0.65
SFXN1-202ENST00000421887 SOBPA7XYQ1 873 aa10.99□□□□□ -0.65
SFXN1-202ENST00000421887 MRPL14Q6P1L8 145 aaKnown RBP10.99□□□□□ -0.65
SFXN1-202ENST00000421887 BAP1Q92560 729 aa10.99□□□□□ -0.65
SFXN1-202ENST00000421887 PURBQ96QR8 312 aaKnown RBP10.99□□□□□ -0.65
SFXN1-202ENST00000421887 UNC93B1Q9H1C4 597 aa10.99□□□□□ -0.65
SFXN1-202ENST00000421887 PLEKHG3A1L390 1219 aa10.98□□□□□ -0.65
SFXN1-202ENST00000421887 FDX1P10109 184 aa10.98□□□□□ -0.65
SFXN1-202ENST00000421887 NNTQ13423 1086 aa10.98□□□□□ -0.65
SFXN1-202ENST00000421887 GPCPD1Q9NPB8 672 aa10.98□□□□□ -0.65
SFXN1-202ENST00000421887 MINK1Q8N4C8 1332 aaPredicted RBP10.96□□□□□ -0.65
SFXN1-202ENST00000421887 KRI1Q8N9T8 703 aaKnown RBP10.96□□□□□ -0.65
SFXN1-202ENST00000421887 FAM217BQ9NTX9 383 aaPredicted RBP10.96□□□□□ -0.65
SFXN1-202ENST00000421887 PCDHGC3Q9UN70 934 aa10.96□□□□□ -0.65
SFXN1-202ENST00000421887 CLCN1P35523 988 aa10.95□□□□□ -0.66
SFXN1-202ENST00000421887 WDR4P57081 412 aaKnown RBP10.95□□□□□ -0.66
SFXN1-202ENST00000421887 CCDC102AQ96A19 550 aa10.95□□□□□ -0.66
SFXN1-202ENST00000421887 PTPRNQ16849 979 aa10.94□□□□□ -0.66
SFXN1-202ENST00000421887 EVA1BQ9NVM1 165 aa10.94□□□□□ -0.66
SFXN1-202ENST00000421887 RB1CC1Q8TDY2 1594 aa10.94□□□□□ -0.66
SFXN1-202ENST00000421887 VARSP26640 1264 aaKnown RBP10.93□□□□□ -0.66
SFXN1-202ENST00000421887 ZNF511Q8NB15 262 aa10.93□□□□□ -0.66
SFXN1-202ENST00000421887 ADH1CP00326 375 aa10.92□□□□□ -0.66
SFXN1-202ENST00000421887 TIMP2P16035 220 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms