RNA–Protein interactions for RNA: ENST00000421538.1

LINC00899-201, long intergenic non-protein coding RNA 899, humanhuman

TSL 1 (best)

Gene LINC00899, Length 2,584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00899-201ENST00000421538 PLIN1O60240 522 aa18.2■□□□□ 0.5
LINC00899-201ENST00000421538 PANK3Q9H999 370 aa18.2■□□□□ 0.5
LINC00899-201ENST00000421538 TRHP20396 242 aaPredicted RBP18.2■□□□□ 0.5
LINC00899-201ENST00000421538 SLC4A3P48751 1232 aa18.19■□□□□ 0.5
LINC00899-201ENST00000421538 TMEM132EQ6IEE7 984 aa18.19■□□□□ 0.5
LINC00899-201ENST00000421538 PLPPR3Q6T4P5 718 aa18.18■□□□□ 0.5
LINC00899-201ENST00000421538 SENP3Q9H4L4 574 aaPredicted RBP18.18■□□□□ 0.5
LINC00899-201ENST00000421538 ADGRB1O14514 1584 aa18.18■□□□□ 0.5
LINC00899-201ENST00000421538 SETBP1Q9Y6X0 1596 aa18.18■□□□□ 0.5
LINC00899-201ENST00000421538 EIF3AQ14152 1382 aaKnown RBP18.18■□□□□ 0.5
LINC00899-201ENST00000421538 VGFO15240 615 aaPredicted RBP18.18■□□□□ 0.5
LINC00899-201ENST00000421538 RSPH6AQ9H0K4 717 aa18.18■□□□□ 0.5
LINC00899-201ENST00000421538 SKAP1Q86WV1 359 aa18.16■□□□□ 0.5
LINC00899-201ENST00000421538 BLMP54132 1417 aaPredicted RBP18.16■□□□□ 0.5
LINC00899-201ENST00000421538 SPATA31D1Q6ZQQ2 1576 aa18.16■□□□□ 0.5
LINC00899-201ENST00000421538 TRAK1Q9UPV9 953 aa18.16■□□□□ 0.5
LINC00899-201ENST00000421538 CRBNQ96SW2 442 aa18.15■□□□□ 0.5
LINC00899-201ENST00000421538 ZMYM3Q14202 1370 aa18.15■□□□□ 0.5
LINC00899-201ENST00000421538 FAM43AQ8N2R8 423 aa18.14■□□□□ 0.49
LINC00899-201ENST00000421538 ZFYVE9O95405 1425 aa18.13■□□□□ 0.49
LINC00899-201ENST00000421538 ESF1Q9H501 851 aaKnown RBP18.12■□□□□ 0.49
LINC00899-201ENST00000421538 MYO3AQ8NEV4 1616 aa18.12■□□□□ 0.49
LINC00899-201ENST00000421538 STAG3Q9UJ98 1225 aa18.11■□□□□ 0.49
LINC00899-201ENST00000421538 CENPJQ9HC77 1338 aaPredicted RBP18.1■□□□□ 0.49
LINC00899-201ENST00000421538 FRAT2O75474 233 aaPredicted RBP18.09■□□□□ 0.49
LINC00899-201ENST00000421538 ADAMTS8Q9UP79 889 aa18.09■□□□□ 0.49
LINC00899-201ENST00000421538 A2ML1A8K2U0 1454 aa18.09■□□□□ 0.49
LINC00899-201ENST00000421538 FAM161AQ3B820 660 aa18.09■□□□□ 0.49
LINC00899-201ENST00000421538 CDCA8Q53HL2 280 aa18.09■□□□□ 0.49
LINC00899-201ENST00000421538 C20orf194Q5TEA3 1177 aa18.08■□□□□ 0.49
LINC00899-201ENST00000421538 ASXL1Q8IXJ9 1541 aa18.08■□□□□ 0.49
LINC00899-201ENST00000421538 MYOM1P52179 1685 aa18.08■□□□□ 0.48
LINC00899-201ENST00000421538 SBNO2Q9Y2G9 1366 aa18.07■□□□□ 0.48
LINC00899-201ENST00000421538 CENPQQ7L2Z9 268 aaPredicted RBP18.07■□□□□ 0.48
LINC00899-201ENST00000421538 INSRP06213 1382 aa18.07■□□□□ 0.48
LINC00899-201ENST00000421538 KDM5AP29375 1690 aaKnown RBP18.06■□□□□ 0.48
LINC00899-201ENST00000421538 QRICH2Q9H0J4 1663 aa18.05■□□□□ 0.48
LINC00899-201ENST00000421538 KDM2BQ8NHM5 1336 aa18.05■□□□□ 0.48
LINC00899-201ENST00000421538 ARHGEF28Q8N1W1 1705 aaKnown RBP18.04■□□□□ 0.48
LINC00899-201ENST00000421538 PLEKHH1Q9ULM0 1364 aa18.03■□□□□ 0.48
LINC00899-201ENST00000421538 ARXQ96QS3 562 aa18.03■□□□□ 0.48
LINC00899-201ENST00000421538 STK26Q9P289 416 aa18.03■□□□□ 0.48
LINC00899-201ENST00000421538 PPP2R1AP30153 589 aa18.03■□□□□ 0.48
LINC00899-201ENST00000421538 CEBPAP49715 358 aaPredicted RBP18.03■□□□□ 0.48
LINC00899-201ENST00000421538 C8orf34Q49A92 452 aa18.03■□□□□ 0.48
LINC00899-201ENST00000421538 RIMS2Q9UQ26 1411 aa18.03■□□□□ 0.48
LINC00899-201ENST00000421538 TNRQ92752 1358 aa18.02■□□□□ 0.48
LINC00899-201ENST00000421538 ALKQ9UM73 1620 aa18.01■□□□□ 0.47
LINC00899-201ENST00000421538 DNAJC5Q9H3Z4 198 aa18.01■□□□□ 0.47
LINC00899-201ENST00000421538 SAFB2Q14151 953 aaKnown RBP eCLIP18■□□□□ 0.47
LINC00899-201ENST00000421538 AMER1Q5JTC6 1135 aaPredicted RBP18■□□□□ 0.47
LINC00899-201ENST00000421538 KNSTRNQ9Y448 316 aa18■□□□□ 0.47
LINC00899-201ENST00000421538 DUSP27Q5VZP5 1158 aa17.99■□□□□ 0.47
LINC00899-201ENST00000421538 WDR43Q15061 677 aaKnown RBP eCLIP17.98■□□□□ 0.47
LINC00899-201ENST00000421538 YTHDC2Q9H6S0 1430 aaKnown RBP17.98■□□□□ 0.47
LINC00899-201ENST00000421538 PTPRMP28827 1452 aa17.97■□□□□ 0.47
LINC00899-201ENST00000421538 CARD14Q9BXL6 1004 aa17.97■□□□□ 0.47
LINC00899-201ENST00000421538 TULP4Q9NRJ4 1543 aa17.96■□□□□ 0.47
LINC00899-201ENST00000421538 ZNF521Q96K83 1311 aa17.96■□□□□ 0.47
LINC00899-201ENST00000421538 RGS3P49796 1198 aa17.95■□□□□ 0.46
LINC00899-201ENST00000421538 SLC12A5Q9H2X9 1139 aa17.95■□□□□ 0.46
LINC00899-201ENST00000421538 PRAM1Q96QH2 718 aa17.94■□□□□ 0.46
LINC00899-201ENST00000421538 SETD1AO15047 1707 aaKnown RBP17.94■□□□□ 0.46
LINC00899-201ENST00000421538 UBR1Q8IWV7 1749 aa17.94■□□□□ 0.46
LINC00899-201ENST00000421538 CCDC146Q8IYE0 955 aa17.94■□□□□ 0.46
LINC00899-201ENST00000421538 NRXN3Q9Y4C0 1643 aa17.94■□□□□ 0.46
LINC00899-201ENST00000421538 C3P01024 1663 aa17.94■□□□□ 0.46
LINC00899-201ENST00000421538 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.93■□□□□ 0.46
LINC00899-201ENST00000421538 GOLGA2Q08379 1002 aa17.93■□□□□ 0.46
LINC00899-201ENST00000421538 L1TD1Q5T7N2 865 aaKnown RBP17.93■□□□□ 0.46
LINC00899-201ENST00000421538 FER1L4A9Z1Z3 1794 aa17.93■□□□□ 0.46
LINC00899-201ENST00000421538 EVC2Q86UK5 1308 aa17.92■□□□□ 0.46
LINC00899-201ENST00000421538 GLIPR1L2Q4G1C9 344 aa17.92■□□□□ 0.46
LINC00899-201ENST00000421538 CABP2Q9NPB3 220 aa17.92■□□□□ 0.46
LINC00899-201ENST00000421538 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.91■□□□□ 0.46
LINC00899-201ENST00000421538 POGKQ9P215 609 aa17.91■□□□□ 0.46
LINC00899-201ENST00000421538 TMEM2Q9UHN6 1383 aa17.91■□□□□ 0.46
LINC00899-201ENST00000421538 MINK1Q8N4C8 1332 aaPredicted RBP17.91■□□□□ 0.46
LINC00899-201ENST00000421538 SPINK5Q9NQ38 1064 aaPredicted RBP17.91■□□□□ 0.46
LINC00899-201ENST00000421538 METP08581 1390 aa17.9■□□□□ 0.46
LINC00899-201ENST00000421538 NPC1L1Q9UHC9 1359 aa17.9■□□□□ 0.46
LINC00899-201ENST00000421538 SLFN5Q08AF3 891 aa17.89■□□□□ 0.46
LINC00899-201ENST00000421538 RRAGDQ9NQL2 400 aaPredicted RBP17.89■□□□□ 0.46
LINC00899-201ENST00000421538 BECN1Q14457 450 aa17.88■□□□□ 0.45
LINC00899-201ENST00000421538 WAPLQ7Z5K2 1190 aa17.88■□□□□ 0.45
LINC00899-201ENST00000421538 NLRP1Q9C000 1473 aa17.88■□□□□ 0.45
LINC00899-201ENST00000421538 PKNOX2Q96KN3 472 aa17.87■□□□□ 0.45
LINC00899-201ENST00000421538 PUS7Q96PZ0 661 aaKnown RBP17.87■□□□□ 0.45
LINC00899-201ENST00000421538 LTKP29376 864 aa17.87■□□□□ 0.45
LINC00899-201ENST00000421538 NSD3Q9BZ95 1437 aa17.87■□□□□ 0.45
LINC00899-201ENST00000421538 APAF1O14727 1248 aa17.86■□□□□ 0.45
LINC00899-201ENST00000421538 HDGFP51858 240 aaKnown RBP17.86■□□□□ 0.45
LINC00899-201ENST00000421538 SRPK2P78362 688 aaKnown RBP17.86■□□□□ 0.45
LINC00899-201ENST00000421538 TRMT2AQ8IZ69 625 aaKnown RBP17.86■□□□□ 0.45
LINC00899-201ENST00000421538 ABCC11Q96J66 1382 aa17.85■□□□□ 0.45
LINC00899-201ENST00000421538 BCAR3O75815 825 aa17.85■□□□□ 0.45
LINC00899-201ENST00000421538 DMRT2Q9Y5R5 561 aa17.85■□□□□ 0.45
LINC00899-201ENST00000421538 DLC1Q96QB1 1528 aa17.84■□□□□ 0.45
LINC00899-201ENST00000421538 ADAMTS13Q76LX8 1427 aa17.82■□□□□ 0.44
LINC00899-201ENST00000421538 SLKQ9H2G2 1235 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms