RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 CDK12Q9NYV4 1490 aaPredicted RBP14.06□□□□□ -0.16
SCRN1-204ENST00000421434 FOXO3O43524 673 aa14.05□□□□□ -0.16
SCRN1-204ENST00000421434 WAPLQ7Z5K2 1190 aa14.05□□□□□ -0.16
SCRN1-204ENST00000421434 TMEM132EQ6IEE7 984 aa14.04□□□□□ -0.16
SCRN1-204ENST00000421434 RGS12O14924 1447 aa14.04□□□□□ -0.16
SCRN1-204ENST00000421434 MPHOSPH9Q99550 1183 aa14.02□□□□□ -0.17
SCRN1-204ENST00000421434 TRPC5Q9UL62 973 aaPredicted RBP14.02□□□□□ -0.17
SCRN1-204ENST00000421434 NPHP3Q7Z494 1330 aa14.01□□□□□ -0.17
SCRN1-204ENST00000421434 FNBP4Q8N3X1 1017 aaPredicted RBP14.01□□□□□ -0.17
SCRN1-204ENST00000421434 CCDC144AA2RUR9 1427 aa13.99□□□□□ -0.17
SCRN1-204ENST00000421434 PRAG1Q86YV5 1406 aa13.98□□□□□ -0.17
SCRN1-204ENST00000421434 SRCAPQ6ZRS2 3230 aa13.98□□□□□ -0.17
SCRN1-204ENST00000421434 PLEKHH1Q9ULM0 1364 aa13.97□□□□□ -0.17
SCRN1-204ENST00000421434 PPLO60437 1756 aa13.97□□□□□ -0.17
SCRN1-204ENST00000421434 PLEKHG5O94827 1062 aa13.97□□□□□ -0.17
SCRN1-204ENST00000421434 LRPPRCP42704 1394 aaKnown RBP13.96□□□□□ -0.17
SCRN1-204ENST00000421434 ANKRD30BQ9BXX2 1392 aa13.96□□□□□ -0.17
SCRN1-204ENST00000421434 LAMC1P11047 1609 aa13.96□□□□□ -0.17
SCRN1-204ENST00000421434 ATAD2Q6PL18 1390 aa13.96□□□□□ -0.18
SCRN1-204ENST00000421434 SPATA31E1Q6ZUB1 1445 aa13.95□□□□□ -0.18
SCRN1-204ENST00000421434 ABCC11Q96J66 1382 aa13.95□□□□□ -0.18
SCRN1-204ENST00000421434 PXDNQ92626 1479 aa13.94□□□□□ -0.18
SCRN1-204ENST00000421434 ATRNO75882 1429 aa13.94□□□□□ -0.18
SCRN1-204ENST00000421434 KRT28Q7Z3Y7 464 aa13.94□□□□□ -0.18
SCRN1-204ENST00000421434 GJD4Q96KN9 370 aaPredicted RBP13.94□□□□□ -0.18
SCRN1-204ENST00000421434 MYOM2P54296 1465 aa13.93□□□□□ -0.18
SCRN1-204ENST00000421434 BCL9LQ86UU0 1499 aa13.93□□□□□ -0.18
SCRN1-204ENST00000421434 SAFB2Q14151 953 aaKnown RBP eCLIP13.93□□□□□ -0.18
SCRN1-204ENST00000421434 CFAP70Q5T0N1 1121 aa13.93□□□□□ -0.18
SCRN1-204ENST00000421434 CDC42BPGQ6DT37 1551 aa13.92□□□□□ -0.18
SCRN1-204ENST00000421434 C14orf93Q9H972 538 aaKnown RBP13.92□□□□□ -0.18
SCRN1-204ENST00000421434 SPATA31A3Q5VYP0 1347 aa13.91□□□□□ -0.18
SCRN1-204ENST00000421434 TECPR2O15040 1411 aa13.91□□□□□ -0.18
SCRN1-204ENST00000421434 YTHDC2Q9H6S0 1430 aaKnown RBP13.91□□□□□ -0.18
SCRN1-204ENST00000421434 HAP1P54257 671 aaPredicted RBP13.91□□□□□ -0.18
SCRN1-204ENST00000421434 LMOD2Q6P5Q4 547 aa13.91□□□□□ -0.18
SCRN1-204ENST00000421434 UNC5CLQ8IV45 518 aa13.91□□□□□ -0.18
SCRN1-204ENST00000421434 CABLES1Q8TDN4 633 aa13.91□□□□□ -0.18
SCRN1-204ENST00000421434 PIK3C2GO75747 1445 aa13.9□□□□□ -0.18
SCRN1-204ENST00000421434 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.18
SCRN1-204ENST00000421434 PHF8Q9UPP1 1060 aa13.9□□□□□ -0.18
SCRN1-204ENST00000421434 DHX57Q6P158 1386 aaKnown RBP13.89□□□□□ -0.19
SCRN1-204ENST00000421434 PSME1Q06323 249 aa13.89□□□□□ -0.19
SCRN1-204ENST00000421434 SIRT1Q96EB6 747 aa13.89□□□□□ -0.19
SCRN1-204ENST00000421434 PRAM1Q96QH2 718 aa13.89□□□□□ -0.19
SCRN1-204ENST00000421434 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
SCRN1-204ENST00000421434 POGKQ9P215 609 aa13.88□□□□□ -0.19
SCRN1-204ENST00000421434 EP400Q96L91 3159 aa13.88□□□□□ -0.19
SCRN1-204ENST00000421434 CCDC125Q86Z20 511 aa13.87□□□□□ -0.19
SCRN1-204ENST00000421434 PMFBP1Q8TBY8 1022 aa13.87□□□□□ -0.19
SCRN1-204ENST00000421434 CCDC9Q9Y3X0 531 aaKnown RBP13.87□□□□□ -0.19
SCRN1-204ENST00000421434 SEPT12Q8IYM1 358 aa13.85□□□□□ -0.19
SCRN1-204ENST00000421434 HIRIP3Q9BW71 556 aaPredicted RBP13.85□□□□□ -0.19
SCRN1-204ENST00000421434 KDM2AQ9Y2K7 1162 aa13.85□□□□□ -0.19
SCRN1-204ENST00000421434 TRAK1Q9UPV9 953 aa13.84□□□□□ -0.19
SCRN1-204ENST00000421434 RALGAPBQ86X10 1494 aa13.84□□□□□ -0.19
SCRN1-204ENST00000421434 SLIT2O94813 1529 aa13.84□□□□□ -0.19
SCRN1-204ENST00000421434 IFT172Q9UG01 1749 aa13.84□□□□□ -0.19
SCRN1-204ENST00000421434 FAM83GA6ND36 823 aa13.83□□□□□ -0.2
SCRN1-204ENST00000421434 TNS3Q68CZ2 1445 aa13.82□□□□□ -0.2
SCRN1-204ENST00000421434 FMN2Q9NZ56 1722 aa13.82□□□□□ -0.2
SCRN1-204ENST00000421434 VPS72Q15906 364 aa13.82□□□□□ -0.2
SCRN1-204ENST00000421434 DEFB132Q7Z7B7 95 aa13.82□□□□□ -0.2
SCRN1-204ENST00000421434 MINK1Q8N4C8 1332 aaPredicted RBP13.82□□□□□ -0.2
SCRN1-204ENST00000421434 ACIN1Q9UKV3 1341 aaKnown RBP13.82□□□□□ -0.2
SCRN1-204ENST00000421434 KNDC1Q76NI1 1749 aa13.81□□□□□ -0.2
SCRN1-204ENST00000421434 MARF1Q9Y4F3 1742 aaKnown RBP13.81□□□□□ -0.2
SCRN1-204ENST00000421434 A0A0G2JS52 829 aa13.81□□□□□ -0.2
SCRN1-204ENST00000421434 MYT1Q01538 1121 aa13.81□□□□□ -0.2
SCRN1-204ENST00000421434 DCAF11Q8TEB1 546 aa13.81□□□□□ -0.2
SCRN1-204ENST00000421434 SBNO1A3KN83 1393 aa13.81□□□□□ -0.2
SCRN1-204ENST00000421434 RGPD8O14715 1765 aaPredicted RBP13.81□□□□□ -0.2
SCRN1-204ENST00000421434 GLI3P10071 1580 aa13.8□□□□□ -0.2
SCRN1-204ENST00000421434 KIF1AQ12756 1690 aa13.8□□□□□ -0.2
SCRN1-204ENST00000421434 SF3B2Q13435 895 aaKnown RBP13.8□□□□□ -0.2
SCRN1-204ENST00000421434 RAB3GAP2Q9H2M9 1393 aa13.8□□□□□ -0.2
SCRN1-204ENST00000421434 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
SCRN1-204ENST00000421434 KRT27Q7Z3Y8 459 aa13.79□□□□□ -0.2
SCRN1-204ENST00000421434 ARHGEF10O15013 1369 aa13.79□□□□□ -0.2
SCRN1-204ENST00000421434 ONECUT3O60422 494 aaPredicted RBP13.78□□□□□ -0.2
SCRN1-204ENST00000421434 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
SCRN1-204ENST00000421434 BTG4Q9NY30 223 aa13.78□□□□□ -0.2
SCRN1-204ENST00000421434 BLMP54132 1417 aaPredicted RBP13.78□□□□□ -0.2
SCRN1-204ENST00000421434 USP32Q8NFA0 1604 aa13.78□□□□□ -0.2
SCRN1-204ENST00000421434 FAM98CQ17RN3 349 aaKnown RBP13.77□□□□□ -0.21
SCRN1-204ENST00000421434 GPRASP1Q5JY77 1395 aa13.77□□□□□ -0.21
SCRN1-204ENST00000421434 NGDNQ8NEJ9 315 aaKnown RBP13.77□□□□□ -0.21
SCRN1-204ENST00000421434 PRR36Q9H6K5 1346 aa13.76□□□□□ -0.21
SCRN1-204ENST00000421434 WASLO00401 505 aaPredicted RBP13.76□□□□□ -0.21
SCRN1-204ENST00000421434 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.76□□□□□ -0.21
SCRN1-204ENST00000421434 ANKARQ7Z5J8 1434 aa13.75□□□□□ -0.21
SCRN1-204ENST00000421434 FAM182BQ5T319 152 aa13.74□□□□□ -0.21
SCRN1-204ENST00000421434 DLC1Q96QB1 1528 aa13.74□□□□□ -0.21
SCRN1-204ENST00000421434 BRWD3Q6RI45 1802 aa13.73□□□□□ -0.21
SCRN1-204ENST00000421434 ADGRB1O14514 1584 aa13.72□□□□□ -0.21
SCRN1-204ENST00000421434 NUTM2GQ5VZR2 741 aa13.71□□□□□ -0.21
SCRN1-204ENST00000421434 NUDT16Q96DE0 195 aaKnown RBP13.71□□□□□ -0.21
SCRN1-204ENST00000421434 PRDM11Q9NQV5 511 aa13.71□□□□□ -0.21
SCRN1-204ENST00000421434 PLCH1Q4KWH8 1693 aa13.7□□□□□ -0.22
SCRN1-204ENST00000421434 PSDA5PKW4 1024 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms