RNA–Protein interactions for RNA: ENST00000421124.6

DDR1-233, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-233ENST00000421124 TRAK1Q9UPV9 953 aa26.64■■□□□ 1.86
DDR1-233ENST00000421124 NBPF8Q3BBV2 869 aa26.62■■□□□ 1.85
DDR1-233ENST00000421124 CDC42BPGQ6DT37 1551 aa26.6■■□□□ 1.85
DDR1-233ENST00000421124 PRAM1Q96QH2 718 aa26.6■■□□□ 1.85
DDR1-233ENST00000421124 POGKQ9P215 609 aa26.59■■□□□ 1.85
DDR1-233ENST00000421124 SLAIN2Q9P270 581 aa26.59■■□□□ 1.85
DDR1-233ENST00000421124 TIMELESSQ9UNS1 1208 aa26.59■■□□□ 1.85
DDR1-233ENST00000421124 ROBO1Q9Y6N7 1651 aa26.59■■□□□ 1.85
DDR1-233ENST00000421124 ROCK2O75116 1388 aaKnown RBP26.58■■□□□ 1.84
DDR1-233ENST00000421124 DISP3Q9P2K9 1392 aa26.56■■□□□ 1.84
DDR1-233ENST00000421124 MST1RQ04912 1400 aa26.56■■□□□ 1.84
DDR1-233ENST00000421124 RALGAPBQ86X10 1494 aa26.55■■□□□ 1.84
DDR1-233ENST00000421124 SAFB2Q14151 953 aaKnown RBP eCLIP26.55■■□□□ 1.84
DDR1-233ENST00000421124 ADGRB2O60241 1585 aa26.53■■□□□ 1.84
DDR1-233ENST00000421124 FMN2Q9NZ56 1722 aa26.53■■□□□ 1.84
DDR1-233ENST00000421124 GPRASP1Q5JY77 1395 aa26.52■■□□□ 1.84
DDR1-233ENST00000421124 C1orf167Q5SNV9 1468 aa26.49■■□□□ 1.83
DDR1-233ENST00000421124 QRICH2Q9H0J4 1663 aa26.48■■□□□ 1.83
DDR1-233ENST00000421124 MINK1Q8N4C8 1332 aaPredicted RBP26.47■■□□□ 1.83
DDR1-233ENST00000421124 ILDR2Q71H61 639 aa26.46■■□□□ 1.83
DDR1-233ENST00000421124 HSPA1LP34931 641 aa26.45■■□□□ 1.82
DDR1-233ENST00000421124 CARD11Q9BXL7 1154 aa26.45■■□□□ 1.82
DDR1-233ENST00000421124 RGPD8O14715 1765 aaPredicted RBP26.44■■□□□ 1.82
DDR1-233ENST00000421124 BRINP3Q76B58 766 aa26.44■■□□□ 1.82
DDR1-233ENST00000421124 PHLPP1O60346 1717 aa26.44■■□□□ 1.82
DDR1-233ENST00000421124 EIF3AQ14152 1382 aaKnown RBP26.44■■□□□ 1.82
DDR1-233ENST00000421124 CENPJQ9HC77 1338 aaPredicted RBP26.43■■□□□ 1.82
DDR1-233ENST00000421124 HIRIP3Q9BW71 556 aaPredicted RBP26.43■■□□□ 1.82
DDR1-233ENST00000421124 NHSL1Q5SYE7 1610 aa26.41■■□□□ 1.82
DDR1-233ENST00000421124 AHDC1Q5TGY3 1603 aaPredicted RBP26.41■■□□□ 1.82
DDR1-233ENST00000421124 NUTM2FA1L443 756 aa26.4■■□□□ 1.82
DDR1-233ENST00000421124 USP32Q8NFA0 1604 aa26.39■■□□□ 1.81
DDR1-233ENST00000421124 WASLO00401 505 aaPredicted RBP26.38■■□□□ 1.81
DDR1-233ENST00000421124 ORAI2Q96SN7 254 aa26.38■■□□□ 1.81
DDR1-233ENST00000421124 TULP4Q9NRJ4 1543 aa26.37■■□□□ 1.81
DDR1-233ENST00000421124 ANKARQ7Z5J8 1434 aa26.37■■□□□ 1.81
DDR1-233ENST00000421124 KIF1AQ12756 1690 aa26.36■■□□□ 1.81
DDR1-233ENST00000421124 ESCO1Q5FWF5 840 aa26.36■■□□□ 1.81
DDR1-233ENST00000421124 COL16A1Q07092 1604 aaPredicted RBP26.36■■□□□ 1.81
DDR1-233ENST00000421124 SOCS7O14512 581 aa26.35■■□□□ 1.81
DDR1-233ENST00000421124 ITSN1Q15811 1721 aa26.34■■□□□ 1.81
DDR1-233ENST00000421124 CDK19Q9BWU1 502 aa26.31■■□□□ 1.8
DDR1-233ENST00000421124 ATP7BP35670 1465 aa26.29■■□□□ 1.8
DDR1-233ENST00000421124 DDX17Q92841 729 aaKnown RBP26.28■■□□□ 1.8
DDR1-233ENST00000421124 PRR36Q9H6K5 1346 aa26.28■■□□□ 1.8
DDR1-233ENST00000421124 SBNO2Q9Y2G9 1366 aa26.28■■□□□ 1.8
DDR1-233ENST00000421124 TOPAZ1Q8N9V7 1692 aa26.28■■□□□ 1.8
DDR1-233ENST00000421124 PHF8Q9UPP1 1060 aa26.27■■□□□ 1.8
DDR1-233ENST00000421124 USP47Q96K76 1375 aa26.26■■□□□ 1.79
DDR1-233ENST00000421124 NPHP3Q7Z494 1330 aa26.26■■□□□ 1.79
DDR1-233ENST00000421124 EVC2Q86UK5 1308 aa26.25■■□□□ 1.79
DDR1-233ENST00000421124 NUDT16Q96DE0 195 aaKnown RBP26.25■■□□□ 1.79
DDR1-233ENST00000421124 FOXO3O43524 673 aa26.24■■□□□ 1.79
DDR1-233ENST00000421124 SRPK2P78362 688 aaKnown RBP26.24■■□□□ 1.79
DDR1-233ENST00000421124 SHPRHQ149N8 1683 aa26.23■■□□□ 1.79
DDR1-233ENST00000421124 SOS2Q07890 1332 aaPredicted RBP26.22■■□□□ 1.79
DDR1-233ENST00000421124 ST20-MTHFSA0A0A6YYL1 179 aa26.22■■□□□ 1.79
DDR1-233ENST00000421124 PXDNQ92626 1479 aa26.22■■□□□ 1.79
DDR1-233ENST00000421124 JCADQ9P266 1359 aa26.21■■□□□ 1.79
DDR1-233ENST00000421124 PMFBP1Q8TBY8 1022 aa26.21■■□□□ 1.79
DDR1-233ENST00000421124 CABP2Q9NPB3 220 aa26.21■■□□□ 1.79
DDR1-233ENST00000421124 LRRC59Q96AG4 307 aaKnown RBP26.2■■□□□ 1.78
DDR1-233ENST00000421124 CCDC61Q9Y6R9 512 aa26.19■■□□□ 1.78
DDR1-233ENST00000421124 XPCQ01831 940 aaPredicted RBP26.17■■□□□ 1.78
DDR1-233ENST00000421124 TESK2Q96S53 571 aa26.16■■□□□ 1.78
DDR1-233ENST00000421124 PPIP5K1Q6PFW1 1433 aa26.15■■□□□ 1.78
DDR1-233ENST00000421124 SLC24A1O60721 1099 aa26.15■■□□□ 1.78
DDR1-233ENST00000421124 KRT28Q7Z3Y7 464 aa26.15■■□□□ 1.78
DDR1-233ENST00000421124 PSME1Q06323 249 aa26.14■■□□□ 1.78
DDR1-233ENST00000421124 NGDNQ8NEJ9 315 aaKnown RBP26.14■■□□□ 1.78
DDR1-233ENST00000421124 MED1Q15648 1581 aaPredicted RBP26.12■■□□□ 1.77
DDR1-233ENST00000421124 ATAD2Q6PL18 1390 aa26.12■■□□□ 1.77
DDR1-233ENST00000421124 PNPLA6Q8IY17 1366 aa26.12■■□□□ 1.77
DDR1-233ENST00000421124 TRPM3Q9HCF6 1732 aaPredicted RBP26.12■■□□□ 1.77
DDR1-233ENST00000421124 PLEKHG3A1L390 1219 aa26.12■■□□□ 1.77
DDR1-233ENST00000421124 POLR3AO14802 1390 aaPredicted RBP26.11■■□□□ 1.77
DDR1-233ENST00000421124 ACEP12821 1306 aa26.1■■□□□ 1.77
DDR1-233ENST00000421124 SPATA31A6Q5VVP1 1343 aa26.1■■□□□ 1.77
DDR1-233ENST00000421124 COL22A1Q8NFW1 1626 aaPredicted RBP26.1■■□□□ 1.77
DDR1-233ENST00000421124 EIF4G2P78344 907 aaKnown RBP eCLIP26.09■■□□□ 1.77
DDR1-233ENST00000421124 SBNO1A3KN83 1393 aa26.08■■□□□ 1.77
DDR1-233ENST00000421124 TNS3Q68CZ2 1445 aa26.08■■□□□ 1.77
DDR1-233ENST00000421124 CABP1Q9NZU7 370 aa26.08■■□□□ 1.77
DDR1-233ENST00000421124 SPATA31A3Q5VYP0 1347 aa26.08■■□□□ 1.77
DDR1-233ENST00000421124 TMF1P82094 1093 aa26.07■■□□□ 1.76
DDR1-233ENST00000421124 PUS7Q96PZ0 661 aaKnown RBP26.07■■□□□ 1.76
DDR1-233ENST00000421124 AKAP12Q02952 1782 aa26.07■■□□□ 1.76
DDR1-233ENST00000421124 ALS2Q96Q42 1657 aa26.06■■□□□ 1.76
DDR1-233ENST00000421124 HSPA5P11021 654 aaKnown RBP26.05■■□□□ 1.76
DDR1-233ENST00000421124 LRP6O75581 1613 aa26.03■■□□□ 1.76
DDR1-233ENST00000421124 ARHGEF10O15013 1369 aa26.01■■□□□ 1.75
DDR1-233ENST00000421124 NUTM2BA6NNL0 878 aaPredicted RBP26■■□□□ 1.75
DDR1-233ENST00000421124 NUTM2EB1AL46 878 aaPredicted RBP26■■□□□ 1.75
DDR1-233ENST00000421124 NUTM2AQ8IVF1 878 aaPredicted RBP26■■□□□ 1.75
DDR1-233ENST00000421124 PAK3O75914 559 aaPredicted RBP25.99■■□□□ 1.75
DDR1-233ENST00000421124 CDCA8Q53HL2 280 aa25.99■■□□□ 1.75
DDR1-233ENST00000421124 LMOD2Q6P5Q4 547 aa25.99■■□□□ 1.75
DDR1-233ENST00000421124 MON2Q7Z3U7 1717 aa25.99■■□□□ 1.75
DDR1-233ENST00000421124 USP6P35125 1406 aa25.98■■□□□ 1.75
DDR1-233ENST00000421124 BRD4O60885 1362 aaPredicted RBP25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 311 ms