RNA–Protein interactions for RNA: ENST00000420732.6

MS4A6A-202, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 1 (best) BASIC

Gene MS4A6A, Length 863 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-202ENST00000420732 ALKQ9UM73 1620 aa9.2□□□□□ -0.94
MS4A6A-202ENST00000420732 ECM2O94769 699 aaPredicted RBP9.19□□□□□ -0.94
MS4A6A-202ENST00000420732 TMEM92Q6UXU6 159 aa9.19□□□□□ -0.94
MS4A6A-202ENST00000420732 STK24Q9Y6E0 443 aa9.19□□□□□ -0.94
MS4A6A-202ENST00000420732 ERBB3P21860 1342 aa9.19□□□□□ -0.94
MS4A6A-202ENST00000420732 ANKRD50Q9ULJ7 1429 aa9.19□□□□□ -0.94
MS4A6A-202ENST00000420732 VWDEQ8N2E2 1590 aa9.19□□□□□ -0.94
MS4A6A-202ENST00000420732 REREQ9P2R6 1566 aa9.19□□□□□ -0.94
MS4A6A-202ENST00000420732 DEPDC5O75140 1603 aa9.19□□□□□ -0.94
MS4A6A-202ENST00000420732 UNC13BO14795 1591 aa9.18□□□□□ -0.94
MS4A6A-202ENST00000420732 ITGAEP38570 1179 aa9.18□□□□□ -0.94
MS4A6A-202ENST00000420732 ERBINQ96RT1 1412 aa9.18□□□□□ -0.94
MS4A6A-202ENST00000420732 KIF15Q9NS87 1388 aa9.18□□□□□ -0.94
MS4A6A-202ENST00000420732 RRP7BPQ9NSQ0 103 aa9.18□□□□□ -0.94
MS4A6A-202ENST00000420732 CHIC2Q9UKJ5 165 aa9.18□□□□□ -0.94
MS4A6A-202ENST00000420732 ABCA6Q8N139 1617 aa9.17□□□□□ -0.94
MS4A6A-202ENST00000420732 EIF2AK4Q9P2K8 1649 aaKnown RBP9.17□□□□□ -0.94
MS4A6A-202ENST00000420732 DIP2CQ9Y2E4 1556 aa9.17□□□□□ -0.94
MS4A6A-202ENST00000420732 DHX29Q7Z478 1369 aaKnown RBP9.17□□□□□ -0.94
MS4A6A-202ENST00000420732 SPAG9O60271 1321 aaKnown RBP9.17□□□□□ -0.94
MS4A6A-202ENST00000420732 CLSPNQ9HAW4 1339 aa9.17□□□□□ -0.94
MS4A6A-202ENST00000420732 STK25O00506 426 aa9.17□□□□□ -0.94
MS4A6A-202ENST00000420732 MROH1Q8NDA8 1641 aa9.16□□□□□ -0.94
MS4A6A-202ENST00000420732 PZPP20742 1482 aa9.16□□□□□ -0.94
MS4A6A-202ENST00000420732 FBXO22Q8NEZ5 403 aa9.15□□□□□ -0.94
MS4A6A-202ENST00000420732 RNF17Q9BXT8 1623 aaKnown RBP9.15□□□□□ -0.94
MS4A6A-202ENST00000420732 AGLP35573 1532 aa9.15□□□□□ -0.95
MS4A6A-202ENST00000420732 NCKAP5LQ9HCH0 1330 aa9.14□□□□□ -0.95
MS4A6A-202ENST00000420732 PIP4K2BP78356 416 aa9.14□□□□□ -0.95
MS4A6A-202ENST00000420732 A2MP01023 1474 aa9.14□□□□□ -0.95
MS4A6A-202ENST00000420732 C3P01024 1663 aa9.13□□□□□ -0.95
MS4A6A-202ENST00000420732 CAMSAP1Q5T5Y3 1602 aa9.13□□□□□ -0.95
MS4A6A-202ENST00000420732 IQGAP3Q86VI3 1631 aa9.13□□□□□ -0.95
MS4A6A-202ENST00000420732 ATP10AO60312 1499 aa9.13□□□□□ -0.95
MS4A6A-202ENST00000420732 SETD1BQ9UPS6 1966 aaKnown RBP9.12□□□□□ -0.95
MS4A6A-202ENST00000420732 PRDM15P57071 1507 aaPredicted RBP9.12□□□□□ -0.95
MS4A6A-202ENST00000420732 LMTK2Q8IWU2 1503 aa9.12□□□□□ -0.95
MS4A6A-202ENST00000420732 SRCAPQ6ZRS2 3230 aa9.12□□□□□ -0.95
MS4A6A-202ENST00000420732 POTEAQ6S8J7 498 aa9.11□□□□□ -0.95
MS4A6A-202ENST00000420732 VARS2Q5ST30 1063 aaKnown RBP9.1□□□□□ -0.95
MS4A6A-202ENST00000420732 MFRPQ9BY79 579 aa9.1□□□□□ -0.95
MS4A6A-202ENST00000420732 ANKRD30BQ9BXX2 1392 aa9.1□□□□□ -0.95
MS4A6A-202ENST00000420732 PKD2Q13563 968 aa9.09□□□□□ -0.95
MS4A6A-202ENST00000420732 GPR153Q6NV75 609 aa9.09□□□□□ -0.95
MS4A6A-202ENST00000420732 MPHOSPH9Q99550 1183 aa9.09□□□□□ -0.95
MS4A6A-202ENST00000420732 FAM135AQ9P2D6 1515 aa9.09□□□□□ -0.95
MS4A6A-202ENST00000420732 PLA2R1Q13018 1463 aa9.08□□□□□ -0.96
MS4A6A-202ENST00000420732 SETD1AO15047 1707 aaKnown RBP9.08□□□□□ -0.96
MS4A6A-202ENST00000420732 RGL2O15211 777 aa9.07□□□□□ -0.96
MS4A6A-202ENST00000420732 TET3O43151 1660 aa9.07□□□□□ -0.96
MS4A6A-202ENST00000420732 SLC24A1O60721 1099 aa9.06□□□□□ -0.96
MS4A6A-202ENST00000420732 ZNF687Q8N1G0 1237 aa9.06□□□□□ -0.96
MS4A6A-202ENST00000420732 NUP155O75694 1391 aa9.06□□□□□ -0.96
MS4A6A-202ENST00000420732 ARHGAP31Q2M1Z3 1444 aa9.05□□□□□ -0.96
MS4A6A-202ENST00000420732 E9PCH4 1651 aa9.05□□□□□ -0.96
MS4A6A-202ENST00000420732 ARSIQ5FYB1 569 aa9.05□□□□□ -0.96
MS4A6A-202ENST00000420732 TOM1O60784 492 aa9.04□□□□□ -0.96
MS4A6A-202ENST00000420732 ABCC3O15438 1527 aa9.04□□□□□ -0.96
MS4A6A-202ENST00000420732 EFCAB6Q5THR3 1501 aa9.04□□□□□ -0.96
MS4A6A-202ENST00000420732 ZC3H13Q5T200 1668 aaKnown RBP9.04□□□□□ -0.96
MS4A6A-202ENST00000420732 CCER1Q8TC90 406 aaPredicted RBP9.03□□□□□ -0.96
MS4A6A-202ENST00000420732 TMC2Q8TDI7 906 aa9.03□□□□□ -0.96
MS4A6A-202ENST00000420732 TIMELESSQ9UNS1 1208 aa9.03□□□□□ -0.96
MS4A6A-202ENST00000420732 NEURL4Q96JN8 1562 aa9.03□□□□□ -0.96
MS4A6A-202ENST00000420732 RPRD2Q5VT52 1461 aaKnown RBP9.02□□□□□ -0.96
MS4A6A-202ENST00000420732 KIF3CO14782 793 aa9.02□□□□□ -0.97
MS4A6A-202ENST00000420732 KIF3BO15066 747 aa9.02□□□□□ -0.97
MS4A6A-202ENST00000420732 C2orf72A6NCS6 295 aa9.01□□□□□ -0.97
MS4A6A-202ENST00000420732 CEP152O94986 1710 aa9.01□□□□□ -0.97
MS4A6A-202ENST00000420732 NOS1P29475 1434 aa9.01□□□□□ -0.97
MS4A6A-202ENST00000420732 ZEB1P37275 1124 aaPredicted RBP9.01□□□□□ -0.97
MS4A6A-202ENST00000420732 NPATQ14207 1427 aa9.01□□□□□ -0.97
MS4A6A-202ENST00000420732 UPF1Q92900 1129 aaKnown RBP eCLIP9.01□□□□□ -0.97
MS4A6A-202ENST00000420732 KHSRPQ92945 711 aaKnown RBP eCLIP9.01□□□□□ -0.97
MS4A6A-202ENST00000420732 CPS1P31327 1500 aa9□□□□□ -0.97
MS4A6A-202ENST00000420732 ZNF316A6NFI3 1004 aaPredicted RBP9□□□□□ -0.97
MS4A6A-202ENST00000420732 TRIM52Q96A61 297 aa9□□□□□ -0.97
MS4A6A-202ENST00000420732 ZNF142P52746 1687 aaPredicted RBP9□□□□□ -0.97
MS4A6A-202ENST00000420732 TRPM2O94759 1503 aa9□□□□□ -0.97
MS4A6A-202ENST00000420732 PIK3C2BO00750 1634 aa8.99□□□□□ -0.97
MS4A6A-202ENST00000420732 PTGER2P43116 358 aa8.99□□□□□ -0.97
MS4A6A-202ENST00000420732 SIN3AQ96ST3 1273 aa8.99□□□□□ -0.97
MS4A6A-202ENST00000420732 SPHKAPQ2M3C7 1700 aa8.99□□□□□ -0.97
MS4A6A-202ENST00000420732 MYO3AQ8NEV4 1616 aa8.98□□□□□ -0.97
MS4A6A-202ENST00000420732 SPATA31E1Q6ZUB1 1445 aa8.98□□□□□ -0.97
MS4A6A-202ENST00000420732 SLC34A2O95436 690 aa8.98□□□□□ -0.97
MS4A6A-202ENST00000420732 MROH2AA6NES4 1674 aa8.97□□□□□ -0.97
MS4A6A-202ENST00000420732 CEP170BQ9Y4F5 1589 aaPredicted RBP8.97□□□□□ -0.97
MS4A6A-202ENST00000420732 KANK1Q14678 1352 aa8.97□□□□□ -0.97
MS4A6A-202ENST00000420732 SYNMO15061 1565 aa8.96□□□□□ -0.97
MS4A6A-202ENST00000420732 RNF166Q96A37 237 aaPredicted RBP8.96□□□□□ -0.98
MS4A6A-202ENST00000420732 MYT1LQ9UL68 1186 aa8.96□□□□□ -0.98
MS4A6A-202ENST00000420732 CNTLNQ9NXG0 1405 aa8.96□□□□□ -0.98
MS4A6A-202ENST00000420732 CLTCL1P53675 1640 aa8.95□□□□□ -0.98
MS4A6A-202ENST00000420732 PPP1R15AO75807 674 aaPredicted RBP8.95□□□□□ -0.98
MS4A6A-202ENST00000420732 ZMYM3Q14202 1370 aa8.95□□□□□ -0.98
MS4A6A-202ENST00000420732 CLTCQ00610 1675 aaKnown RBP8.94□□□□□ -0.98
MS4A6A-202ENST00000420732 GGT6Q6P531 493 aa8.94□□□□□ -0.98
MS4A6A-202ENST00000420732 HS6ST3Q8IZP7 471 aa8.94□□□□□ -0.98
MS4A6A-202ENST00000420732 PCDHGA4Q9Y5G9 962 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms