RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 MINK1Q8N4C8 1332 aaPredicted RBP17.47■□□□□ 0.39
TMEM53-206ENST00000420706 NKTRP30414 1462 aaKnown RBP17.46■□□□□ 0.39
TMEM53-206ENST00000420706 TMF1P82094 1093 aa17.46■□□□□ 0.39
TMEM53-206ENST00000420706 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.45■□□□□ 0.38
TMEM53-206ENST00000420706 RBM33Q96EV2 1170 aaKnown RBP17.45■□□□□ 0.38
TMEM53-206ENST00000420706 EVC2Q86UK5 1308 aa17.43■□□□□ 0.38
TMEM53-206ENST00000420706 DISP3Q9P2K9 1392 aa17.42■□□□□ 0.38
TMEM53-206ENST00000420706 TMEM94Q12767 1356 aa17.41■□□□□ 0.38
TMEM53-206ENST00000420706 NCOA3Q9Y6Q9 1424 aa17.41■□□□□ 0.38
TMEM53-206ENST00000420706 WASLO00401 505 aaPredicted RBP17.41■□□□□ 0.38
TMEM53-206ENST00000420706 CDK19Q9BWU1 502 aa17.41■□□□□ 0.38
TMEM53-206ENST00000420706 LRRC7Q96NW7 1537 aa17.41■□□□□ 0.38
TMEM53-206ENST00000420706 CDCA8Q53HL2 280 aa17.4■□□□□ 0.38
TMEM53-206ENST00000420706 PUS7Q96PZ0 661 aaKnown RBP17.4■□□□□ 0.38
TMEM53-206ENST00000420706 TULP4Q9NRJ4 1543 aa17.4■□□□□ 0.38
TMEM53-206ENST00000420706 KIF7Q2M1P5 1343 aa17.4■□□□□ 0.38
TMEM53-206ENST00000420706 WASHC2AQ641Q2 1341 aa17.4■□□□□ 0.38
TMEM53-206ENST00000420706 LTBP4Q8N2S1 1624 aa17.39■□□□□ 0.37
TMEM53-206ENST00000420706 CCDC7Q96M83 1385 aa17.39■□□□□ 0.37
TMEM53-206ENST00000420706 ADGRL3Q9HAR2 1447 aa17.38■□□□□ 0.37
TMEM53-206ENST00000420706 ADGRB2O60241 1585 aa17.38■□□□□ 0.37
TMEM53-206ENST00000420706 C14orf37Q86TY3 774 aa17.38■□□□□ 0.37
TMEM53-206ENST00000420706 CERKQ8TCT0 537 aa17.38■□□□□ 0.37
TMEM53-206ENST00000420706 C19orf44Q9H6X5 657 aa17.38■□□□□ 0.37
TMEM53-206ENST00000420706 CABP2Q9NPB3 220 aa17.38■□□□□ 0.37
TMEM53-206ENST00000420706 SRPK2P78362 688 aaKnown RBP17.37■□□□□ 0.37
TMEM53-206ENST00000420706 POLR3GLQ9BT43 218 aa17.37■□□□□ 0.37
TMEM53-206ENST00000420706 XIRP1Q702N8 1843 aaKnown RBP17.37■□□□□ 0.37
TMEM53-206ENST00000420706 NALCNQ8IZF0 1738 aa17.36■□□□□ 0.37
TMEM53-206ENST00000420706 NUDT16Q96DE0 195 aaKnown RBP17.33■□□□□ 0.36
TMEM53-206ENST00000420706 CDC42BPGQ6DT37 1551 aa17.32■□□□□ 0.36
TMEM53-206ENST00000420706 PRR36Q9H6K5 1346 aa17.32■□□□□ 0.36
TMEM53-206ENST00000420706 NUTM2FA1L443 756 aa17.32■□□□□ 0.36
TMEM53-206ENST00000420706 MSH6P52701 1360 aa17.31■□□□□ 0.36
TMEM53-206ENST00000420706 ATAD2Q6PL18 1390 aa17.31■□□□□ 0.36
TMEM53-206ENST00000420706 FMN2Q9NZ56 1722 aa17.3■□□□□ 0.36
TMEM53-206ENST00000420706 ATF3P18847 181 aa17.3■□□□□ 0.36
TMEM53-206ENST00000420706 DDX10Q13206 875 aaKnown RBP17.3■□□□□ 0.36
TMEM53-206ENST00000420706 CCDC61Q9Y6R9 512 aa17.3■□□□□ 0.36
TMEM53-206ENST00000420706 DCCP43146 1447 aa17.3■□□□□ 0.36
TMEM53-206ENST00000420706 CADPS2Q86UW7 1296 aa17.29■□□□□ 0.36
TMEM53-206ENST00000420706 TMC1Q8TDI8 760 aa17.29■□□□□ 0.36
TMEM53-206ENST00000420706 SLC12A5Q9H2X9 1139 aa17.29■□□□□ 0.36
TMEM53-206ENST00000420706 CABP1Q9NZU7 370 aa17.28■□□□□ 0.36
TMEM53-206ENST00000420706 ATP7BP35670 1465 aa17.28■□□□□ 0.36
TMEM53-206ENST00000420706 ANKARQ7Z5J8 1434 aa17.28■□□□□ 0.36
TMEM53-206ENST00000420706 USP32Q8NFA0 1604 aa17.28■□□□□ 0.36
TMEM53-206ENST00000420706 RGPD8O14715 1765 aaPredicted RBP17.26■□□□□ 0.35
TMEM53-206ENST00000420706 MST1RQ04912 1400 aa17.25■□□□□ 0.35
TMEM53-206ENST00000420706 PPIP5K1Q6PFW1 1433 aa17.25■□□□□ 0.35
TMEM53-206ENST00000420706 PLEKHG3A1L390 1219 aa17.25■□□□□ 0.35
TMEM53-206ENST00000420706 MYOM1P52179 1685 aa17.25■□□□□ 0.35
TMEM53-206ENST00000420706 NINLQ9Y2I6 1382 aa17.25■□□□□ 0.35
TMEM53-206ENST00000420706 C1orf167Q5SNV9 1468 aa17.24■□□□□ 0.35
TMEM53-206ENST00000420706 ILDR1Q86SU0 546 aaPredicted RBP17.24■□□□□ 0.35
TMEM53-206ENST00000420706 FBXO41Q8TF61 875 aa17.24■□□□□ 0.35
TMEM53-206ENST00000420706 PANK3Q9H999 370 aa17.24■□□□□ 0.35
TMEM53-206ENST00000420706 ESCO1Q5FWF5 840 aa17.23■□□□□ 0.35
TMEM53-206ENST00000420706 TOPAZ1Q8N9V7 1692 aa17.23■□□□□ 0.35
TMEM53-206ENST00000420706 PMFBP1Q8TBY8 1022 aa17.22■□□□□ 0.35
TMEM53-206ENST00000420706 ORAI2Q96SN7 254 aa17.22■□□□□ 0.35
TMEM53-206ENST00000420706 SLAIN2Q9P270 581 aa17.22■□□□□ 0.35
TMEM53-206ENST00000420706 TERF2IPQ9NYB0 399 aa17.21■□□□□ 0.35
TMEM53-206ENST00000420706 PHF8Q9UPP1 1060 aa17.21■□□□□ 0.35
TMEM53-206ENST00000420706 ITSN1Q15811 1721 aa17.21■□□□□ 0.35
TMEM53-206ENST00000420706 CD163L1Q9NR16 1453 aa17.2■□□□□ 0.34
TMEM53-206ENST00000420706 ANKRD36BQ8N2N9 1353 aa17.2■□□□□ 0.34
TMEM53-206ENST00000420706 UBAP1LF5GYI3 381 aa17.2■□□□□ 0.34
TMEM53-206ENST00000420706 PER1O15534 1290 aaPredicted RBP17.2■□□□□ 0.34
TMEM53-206ENST00000420706 ACEP12821 1306 aa17.2■□□□□ 0.34
TMEM53-206ENST00000420706 HDGFL2Q7Z4V5 671 aaPredicted RBP17.19■□□□□ 0.34
TMEM53-206ENST00000420706 ZNF692Q9BU19 519 aaPredicted RBP17.19■□□□□ 0.34
TMEM53-206ENST00000420706 CARD14Q9BXL6 1004 aa17.19■□□□□ 0.34
TMEM53-206ENST00000420706 CPSF1Q10570 1443 aaKnown RBP17.19■□□□□ 0.34
TMEM53-206ENST00000420706 IQSEC2Q5JU85 1478 aa17.18■□□□□ 0.34
TMEM53-206ENST00000420706 NGDNQ8NEJ9 315 aaKnown RBP17.18■□□□□ 0.34
TMEM53-206ENST00000420706 A0A1W2PP64 1363 aa17.17■□□□□ 0.34
TMEM53-206ENST00000420706 POLR3AO14802 1390 aaPredicted RBP17.17■□□□□ 0.34
TMEM53-206ENST00000420706 BRINP3Q76B58 766 aa17.16■□□□□ 0.34
TMEM53-206ENST00000420706 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
TMEM53-206ENST00000420706 AKAP12Q02952 1782 aa17.15■□□□□ 0.34
TMEM53-206ENST00000420706 TOM1O60784 492 aa17.15■□□□□ 0.34
TMEM53-206ENST00000420706 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
TMEM53-206ENST00000420706 FOXO3O43524 673 aa17.14■□□□□ 0.33
TMEM53-206ENST00000420706 PIP4K2BP78356 416 aa17.14■□□□□ 0.33
TMEM53-206ENST00000420706 DIEXFQ68CQ4 756 aaKnown RBP17.14■□□□□ 0.33
TMEM53-206ENST00000420706 KNSTRNQ9Y448 316 aa17.14■□□□□ 0.33
TMEM53-206ENST00000420706 KIF1AQ12756 1690 aa17.13■□□□□ 0.33
TMEM53-206ENST00000420706 NSD3Q9BZ95 1437 aa17.13■□□□□ 0.33
TMEM53-206ENST00000420706 PSME1Q06323 249 aa17.12■□□□□ 0.33
TMEM53-206ENST00000420706 USP6P35125 1406 aa17.12■□□□□ 0.33
TMEM53-206ENST00000420706 MON2Q7Z3U7 1717 aa17.11■□□□□ 0.33
TMEM53-206ENST00000420706 KRT28Q7Z3Y7 464 aa17.11■□□□□ 0.33
TMEM53-206ENST00000420706 SSH2Q76I76 1423 aa17.11■□□□□ 0.33
TMEM53-206ENST00000420706 AMER1Q5JTC6 1135 aaPredicted RBP17.1■□□□□ 0.33
TMEM53-206ENST00000420706 DDX17Q92841 729 aaKnown RBP17.1■□□□□ 0.33
TMEM53-206ENST00000420706 TTC21BQ7Z4L5 1316 aa17.1■□□□□ 0.33
TMEM53-206ENST00000420706 EDC4Q6P2E9 1401 aaKnown RBP17.1■□□□□ 0.33
TMEM53-206ENST00000420706 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.09■□□□□ 0.33
TMEM53-206ENST00000420706 NPHP3Q7Z494 1330 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms