RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 MST1RQ04912 1400 aa26.37■■□□□ 1.81
ECHDC3-202ENST00000420401 QTRT2Q9H974 415 aaKnown RBP26.36■■□□□ 1.81
ECHDC3-202ENST00000420401 PCGF6Q9BYE7 350 aa26.35■■□□□ 1.81
ECHDC3-202ENST00000420401 RBM6P78332 1123 aaKnown RBP26.33■■□□□ 1.81
ECHDC3-202ENST00000420401 CFAP70Q5T0N1 1121 aa26.33■■□□□ 1.81
ECHDC3-202ENST00000420401 PTCH1Q13635 1447 aa26.32■■□□□ 1.8
ECHDC3-202ENST00000420401 TMEM132EQ6IEE7 984 aa26.32■■□□□ 1.8
ECHDC3-202ENST00000420401 SIN3AQ96ST3 1273 aa26.32■■□□□ 1.8
ECHDC3-202ENST00000420401 STK26Q9P289 416 aa26.31■■□□□ 1.8
ECHDC3-202ENST00000420401 LRPPRCP42704 1394 aaKnown RBP26.31■■□□□ 1.8
ECHDC3-202ENST00000420401 PRAG1Q86YV5 1406 aa26.31■■□□□ 1.8
ECHDC3-202ENST00000420401 NEUROD1Q13562 356 aa26.3■■□□□ 1.8
ECHDC3-202ENST00000420401 DDX17Q92841 729 aaKnown RBP26.3■■□□□ 1.8
ECHDC3-202ENST00000420401 ROBO2Q9HCK4 1378 aa26.3■■□□□ 1.8
ECHDC3-202ENST00000420401 NGLY1Q96IV0 654 aa26.29■■□□□ 1.8
ECHDC3-202ENST00000420401 PNPLA6Q8IY17 1366 aa26.29■■□□□ 1.8
ECHDC3-202ENST00000420401 RGS12O14924 1447 aa26.29■■□□□ 1.8
ECHDC3-202ENST00000420401 ADGRL3Q9HAR2 1447 aa26.28■■□□□ 1.8
ECHDC3-202ENST00000420401 LAMC1P11047 1609 aa26.28■■□□□ 1.8
ECHDC3-202ENST00000420401 ABCC11Q96J66 1382 aa26.27■■□□□ 1.8
ECHDC3-202ENST00000420401 NALCNQ8IZF0 1738 aa26.27■■□□□ 1.8
ECHDC3-202ENST00000420401 YTHDC2Q9H6S0 1430 aaKnown RBP26.26■■□□□ 1.79
ECHDC3-202ENST00000420401 ADAMTS2O95450 1211 aa26.26■■□□□ 1.79
ECHDC3-202ENST00000420401 TECPR2O15040 1411 aa26.24■■□□□ 1.79
ECHDC3-202ENST00000420401 L3MBTL2Q969R5 705 aa26.23■■□□□ 1.79
ECHDC3-202ENST00000420401 SIRT1Q96EB6 747 aa26.23■■□□□ 1.79
ECHDC3-202ENST00000420401 C1orf167Q5SNV9 1468 aa26.19■■□□□ 1.78
ECHDC3-202ENST00000420401 WAPLQ7Z5K2 1190 aa26.19■■□□□ 1.78
ECHDC3-202ENST00000420401 ATAD2Q6PL18 1390 aa26.19■■□□□ 1.78
ECHDC3-202ENST00000420401 USP21Q9UK80 565 aa26.18■■□□□ 1.78
ECHDC3-202ENST00000420401 KNDC1Q76NI1 1749 aa26.16■■□□□ 1.78
ECHDC3-202ENST00000420401 ADGRB1O14514 1584 aa26.16■■□□□ 1.78
ECHDC3-202ENST00000420401 TRPC5Q9UL62 973 aaPredicted RBP26.15■■□□□ 1.78
ECHDC3-202ENST00000420401 ORAI2Q96SN7 254 aa26.14■■□□□ 1.78
ECHDC3-202ENST00000420401 POGKQ9P215 609 aa26.13■■□□□ 1.77
ECHDC3-202ENST00000420401 TRAK1Q9UPV9 953 aa26.13■■□□□ 1.77
ECHDC3-202ENST00000420401 PLEKHH1Q9ULM0 1364 aa26.12■■□□□ 1.77
ECHDC3-202ENST00000420401 PRAM1Q96QH2 718 aa26.12■■□□□ 1.77
ECHDC3-202ENST00000420401 SOS2Q07890 1332 aaPredicted RBP26.12■■□□□ 1.77
ECHDC3-202ENST00000420401 TONSLQ96HA7 1378 aa26.11■■□□□ 1.77
ECHDC3-202ENST00000420401 DLC1Q96QB1 1528 aa26.11■■□□□ 1.77
ECHDC3-202ENST00000420401 ZRANB1Q9UGI0 708 aa26.09■■□□□ 1.77
ECHDC3-202ENST00000420401 KIAA1210Q9ULL0 1709 aa26.08■■□□□ 1.77
ECHDC3-202ENST00000420401 FNBP4Q8N3X1 1017 aaPredicted RBP26.08■■□□□ 1.77
ECHDC3-202ENST00000420401 SAFB2Q14151 953 aaKnown RBP eCLIP26.06■■□□□ 1.76
ECHDC3-202ENST00000420401 NBPF1Q3BBV0 1214 aa26.06■■□□□ 1.76
ECHDC3-202ENST00000420401 SRCAPQ6ZRS2 3230 aa26.06■■□□□ 1.76
ECHDC3-202ENST00000420401 COL22A1Q8NFW1 1626 aaPredicted RBP26.05■■□□□ 1.76
ECHDC3-202ENST00000420401 CLSPNQ9HAW4 1339 aa26.05■■□□□ 1.76
ECHDC3-202ENST00000420401 CDC42BPGQ6DT37 1551 aa26.04■■□□□ 1.76
ECHDC3-202ENST00000420401 ATRNO75882 1429 aa26.03■■□□□ 1.76
ECHDC3-202ENST00000420401 MARF1Q9Y4F3 1742 aaKnown RBP26.02■■□□□ 1.76
ECHDC3-202ENST00000420401 ESCO1Q5FWF5 840 aa26.01■■□□□ 1.75
ECHDC3-202ENST00000420401 CCDC125Q86Z20 511 aa26.01■■□□□ 1.75
ECHDC3-202ENST00000420401 NPHP3Q7Z494 1330 aa26■■□□□ 1.75
ECHDC3-202ENST00000420401 CCER1Q8TC90 406 aaPredicted RBP25.98■■□□□ 1.75
ECHDC3-202ENST00000420401 NBPF8Q3BBV2 869 aa25.97■■□□□ 1.75
ECHDC3-202ENST00000420401 EP400Q96L91 3159 aa25.97■■□□□ 1.75
ECHDC3-202ENST00000420401 ROCK2O75116 1388 aaKnown RBP25.96■■□□□ 1.75
ECHDC3-202ENST00000420401 MINK1Q8N4C8 1332 aaPredicted RBP25.96■■□□□ 1.75
ECHDC3-202ENST00000420401 NUTM2FA1L443 756 aa25.96■■□□□ 1.75
ECHDC3-202ENST00000420401 BCL9LQ86UU0 1499 aa25.94■■□□□ 1.74
ECHDC3-202ENST00000420401 FOXO3O43524 673 aa25.94■■□□□ 1.74
ECHDC3-202ENST00000420401 XPCQ01831 940 aaPredicted RBP25.94■■□□□ 1.74
ECHDC3-202ENST00000420401 GJD4Q96KN9 370 aaPredicted RBP25.94■■□□□ 1.74
ECHDC3-202ENST00000420401 HIRIP3Q9BW71 556 aaPredicted RBP25.94■■□□□ 1.74
ECHDC3-202ENST00000420401 TRPM1Q7Z4N2 1603 aa25.93■■□□□ 1.74
ECHDC3-202ENST00000420401 TIMELESSQ9UNS1 1208 aa25.93■■□□□ 1.74
ECHDC3-202ENST00000420401 ARHGEF28Q8N1W1 1705 aaKnown RBP25.92■■□□□ 1.74
ECHDC3-202ENST00000420401 PXDNQ92626 1479 aa25.91■■□□□ 1.74
ECHDC3-202ENST00000420401 EIF3AQ14152 1382 aaKnown RBP25.91■■□□□ 1.74
ECHDC3-202ENST00000420401 FMN2Q9NZ56 1722 aa25.91■■□□□ 1.74
ECHDC3-202ENST00000420401 ADGRB2O60241 1585 aa25.9■■□□□ 1.74
ECHDC3-202ENST00000420401 WASLO00401 505 aaPredicted RBP25.9■■□□□ 1.74
ECHDC3-202ENST00000420401 CENPJQ9HC77 1338 aaPredicted RBP25.89■■□□□ 1.74
ECHDC3-202ENST00000420401 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.89■■□□□ 1.74
ECHDC3-202ENST00000420401 GPRASP1Q5JY77 1395 aa25.87■■□□□ 1.73
ECHDC3-202ENST00000420401 ANKARQ7Z5J8 1434 aa25.87■■□□□ 1.73
ECHDC3-202ENST00000420401 CARD11Q9BXL7 1154 aa25.86■■□□□ 1.73
ECHDC3-202ENST00000420401 UNC5CLQ8IV45 518 aa25.85■■□□□ 1.73
ECHDC3-202ENST00000420401 PHF8Q9UPP1 1060 aa25.85■■□□□ 1.73
ECHDC3-202ENST00000420401 RALGAPBQ86X10 1494 aa25.85■■□□□ 1.73
ECHDC3-202ENST00000420401 CDK19Q9BWU1 502 aa25.83■■□□□ 1.73
ECHDC3-202ENST00000420401 BRWD3Q6RI45 1802 aa25.83■■□□□ 1.73
ECHDC3-202ENST00000420401 BLMP54132 1417 aaPredicted RBP25.82■■□□□ 1.72
ECHDC3-202ENST00000420401 SF3B2Q13435 895 aaKnown RBP25.82■■□□□ 1.72
ECHDC3-202ENST00000420401 HAP1P54257 671 aaPredicted RBP25.81■■□□□ 1.72
ECHDC3-202ENST00000420401 GLI3P10071 1580 aa25.81■■□□□ 1.72
ECHDC3-202ENST00000420401 TULP4Q9NRJ4 1543 aa25.8■■□□□ 1.72
ECHDC3-202ENST00000420401 NUDT16Q96DE0 195 aaKnown RBP25.79■■□□□ 1.72
ECHDC3-202ENST00000420401 KIF1AQ12756 1690 aa25.79■■□□□ 1.72
ECHDC3-202ENST00000420401 SPATA31A3Q5VYP0 1347 aa25.79■■□□□ 1.72
ECHDC3-202ENST00000420401 SLIT2O94813 1529 aa25.78■■□□□ 1.72
ECHDC3-202ENST00000420401 PRR36Q9H6K5 1346 aa25.78■■□□□ 1.72
ECHDC3-202ENST00000420401 PMFBP1Q8TBY8 1022 aa25.77■■□□□ 1.72
ECHDC3-202ENST00000420401 SRPK2P78362 688 aaKnown RBP25.76■■□□□ 1.71
ECHDC3-202ENST00000420401 PSME1Q06323 249 aa25.76■■□□□ 1.71
ECHDC3-202ENST00000420401 KRT28Q7Z3Y7 464 aa25.76■■□□□ 1.71
ECHDC3-202ENST00000420401 DEFB132Q7Z7B7 95 aa25.76■■□□□ 1.71
ECHDC3-202ENST00000420401 USP32Q8NFA0 1604 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms