RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 FMN2Q9NZ56 1722 aa30.18■■■□□ 2.42
MCF2L-212ENST00000420013 YTHDC2Q9H6S0 1430 aaKnown RBP30.16■■■□□ 2.42
MCF2L-212ENST00000420013 SOS2Q07890 1332 aaPredicted RBP30.16■■■□□ 2.42
MCF2L-212ENST00000420013 KIF1AQ12756 1690 aa30.15■■■□□ 2.42
MCF2L-212ENST00000420013 CDK12Q9NYV4 1490 aaPredicted RBP30.13■■■□□ 2.41
MCF2L-212ENST00000420013 DDX17Q92841 729 aaKnown RBP30.13■■■□□ 2.41
MCF2L-212ENST00000420013 NUTM2BA6NNL0 878 aaPredicted RBP30.12■■■□□ 2.41
MCF2L-212ENST00000420013 NUTM2EB1AL46 878 aaPredicted RBP30.12■■■□□ 2.41
MCF2L-212ENST00000420013 NUTM2AQ8IVF1 878 aaPredicted RBP30.12■■■□□ 2.41
MCF2L-212ENST00000420013 ORAI2Q96SN7 254 aa30.12■■■□□ 2.41
MCF2L-212ENST00000420013 NPHP3Q7Z494 1330 aa30.1■■■□□ 2.41
MCF2L-212ENST00000420013 PXDNQ92626 1479 aa30.08■■■□□ 2.41
MCF2L-212ENST00000420013 AFF2P51816 1311 aa30.08■■■□□ 2.41
MCF2L-212ENST00000420013 STK26Q9P289 416 aa30.08■■■□□ 2.41
MCF2L-212ENST00000420013 DLC1Q96QB1 1528 aa30.07■■■□□ 2.4
MCF2L-212ENST00000420013 SIRT1Q96EB6 747 aa30.06■■■□□ 2.4
MCF2L-212ENST00000420013 C14orf93Q9H972 538 aaKnown RBP30.06■■■□□ 2.4
MCF2L-212ENST00000420013 DHX57Q6P158 1386 aaKnown RBP30.05■■■□□ 2.4
MCF2L-212ENST00000420013 PLEKHH1Q9ULM0 1364 aa30.05■■■□□ 2.4
MCF2L-212ENST00000420013 TMEM132EQ6IEE7 984 aa30.05■■■□□ 2.4
MCF2L-212ENST00000420013 MARF1Q9Y4F3 1742 aaKnown RBP30.05■■■□□ 2.4
MCF2L-212ENST00000420013 HRCP23327 699 aa30.03■■■□□ 2.4
MCF2L-212ENST00000420013 WAPLQ7Z5K2 1190 aa30.03■■■□□ 2.4
MCF2L-212ENST00000420013 ADGRB2O60241 1585 aa30.03■■■□□ 2.4
MCF2L-212ENST00000420013 ESCO1Q5FWF5 840 aa30.02■■■□□ 2.4
MCF2L-212ENST00000420013 RXRBP28702 533 aa30.01■■■□□ 2.39
MCF2L-212ENST00000420013 ADGRB1O14514 1584 aa30.01■■■□□ 2.39
MCF2L-212ENST00000420013 C8orf37Q96NL8 207 aa30■■■□□ 2.39
MCF2L-212ENST00000420013 CFAP70Q5T0N1 1121 aa29.97■■■□□ 2.39
MCF2L-212ENST00000420013 RGPD8O14715 1765 aaPredicted RBP29.97■■■□□ 2.39
MCF2L-212ENST00000420013 STAC3Q96MF2 364 aa29.95■■■□□ 2.39
MCF2L-212ENST00000420013 RGS12O14924 1447 aa29.92■■■□□ 2.38
MCF2L-212ENST00000420013 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.91■■■□□ 2.38
MCF2L-212ENST00000420013 ANKARQ7Z5J8 1434 aa29.91■■■□□ 2.38
MCF2L-212ENST00000420013 FOXO3O43524 673 aa29.91■■■□□ 2.38
MCF2L-212ENST00000420013 ADAMTS2O95450 1211 aa29.91■■■□□ 2.38
MCF2L-212ENST00000420013 RBM6P78332 1123 aaKnown RBP29.9■■■□□ 2.38
MCF2L-212ENST00000420013 NGLY1Q96IV0 654 aa29.9■■■□□ 2.38
MCF2L-212ENST00000420013 NUTM2FA1L443 756 aa29.89■■■□□ 2.38
MCF2L-212ENST00000420013 USP32Q8NFA0 1604 aa29.89■■■□□ 2.37
MCF2L-212ENST00000420013 PRAM1Q96QH2 718 aa29.87■■■□□ 2.37
MCF2L-212ENST00000420013 QTRT2Q9H974 415 aaKnown RBP29.87■■■□□ 2.37
MCF2L-212ENST00000420013 ARHGEF28Q8N1W1 1705 aaKnown RBP29.87■■■□□ 2.37
MCF2L-212ENST00000420013 EIF3AQ14152 1382 aaKnown RBP29.86■■■□□ 2.37
MCF2L-212ENST00000420013 FNBP4Q8N3X1 1017 aaPredicted RBP29.85■■■□□ 2.37
MCF2L-212ENST00000420013 ATRNO75882 1429 aa29.85■■■□□ 2.37
MCF2L-212ENST00000420013 TNS3Q68CZ2 1445 aa29.85■■■□□ 2.37
MCF2L-212ENST00000420013 ABCA3Q99758 1704 aa29.85■■■□□ 2.37
MCF2L-212ENST00000420013 KIAA1210Q9ULL0 1709 aa29.85■■■□□ 2.37
MCF2L-212ENST00000420013 SPATA31A3Q5VYP0 1347 aa29.84■■■□□ 2.37
MCF2L-212ENST00000420013 XPCQ01831 940 aaPredicted RBP29.83■■■□□ 2.37
MCF2L-212ENST00000420013 USP21Q9UK80 565 aa29.83■■■□□ 2.37
MCF2L-212ENST00000420013 TULP4Q9NRJ4 1543 aa29.82■■■□□ 2.36
MCF2L-212ENST00000420013 UPF1Q92900 1129 aaKnown RBP eCLIP29.82■■■□□ 2.36
MCF2L-212ENST00000420013 POGKQ9P215 609 aa29.82■■■□□ 2.36
MCF2L-212ENST00000420013 TRPC5Q9UL62 973 aaPredicted RBP29.82■■■□□ 2.36
MCF2L-212ENST00000420013 DCAF11Q8TEB1 546 aa29.81■■■□□ 2.36
MCF2L-212ENST00000420013 PHF8Q9UPP1 1060 aa29.81■■■□□ 2.36
MCF2L-212ENST00000420013 ITSN1Q15811 1721 aa29.8■■■□□ 2.36
MCF2L-212ENST00000420013 SBNO1A3KN83 1393 aa29.79■■■□□ 2.36
MCF2L-212ENST00000420013 SAFB2Q14151 953 aaKnown RBP eCLIP29.78■■■□□ 2.36
MCF2L-212ENST00000420013 TRPM3Q9HCF6 1732 aaPredicted RBP29.77■■■□□ 2.36
MCF2L-212ENST00000420013 BCL9LQ86UU0 1499 aa29.77■■■□□ 2.36
MCF2L-212ENST00000420013 KRT28Q7Z3Y7 464 aa29.77■■■□□ 2.36
MCF2L-212ENST00000420013 PSME1Q06323 249 aa29.76■■■□□ 2.35
MCF2L-212ENST00000420013 NWD2Q9ULI1 1742 aa29.76■■■□□ 2.35
MCF2L-212ENST00000420013 ARHGEF10O15013 1369 aa29.76■■■□□ 2.35
MCF2L-212ENST00000420013 TRAK1Q9UPV9 953 aa29.75■■■□□ 2.35
MCF2L-212ENST00000420013 KDM2AQ9Y2K7 1162 aa29.75■■■□□ 2.35
MCF2L-212ENST00000420013 SLIT2O94813 1529 aa29.75■■■□□ 2.35
MCF2L-212ENST00000420013 PLCH1Q4KWH8 1693 aa29.73■■■□□ 2.35
MCF2L-212ENST00000420013 ALS2Q96Q42 1657 aa29.73■■■□□ 2.35
MCF2L-212ENST00000420013 ATAD2Q6PL18 1390 aa29.71■■■□□ 2.35
MCF2L-212ENST00000420013 MINK1Q8N4C8 1332 aaPredicted RBP29.68■■■□□ 2.34
MCF2L-212ENST00000420013 ATP7BP35670 1465 aa29.67■■■□□ 2.34
MCF2L-212ENST00000420013 TOPAZ1Q8N9V7 1692 aa29.66■■■□□ 2.34
MCF2L-212ENST00000420013 GLI3P10071 1580 aa29.66■■■□□ 2.34
MCF2L-212ENST00000420013 WASLO00401 505 aaPredicted RBP29.65■■■□□ 2.34
MCF2L-212ENST00000420013 HIRIP3Q9BW71 556 aaPredicted RBP29.65■■■□□ 2.34
MCF2L-212ENST00000420013 CRYBG1Q9Y4K1 1723 aa29.65■■■□□ 2.34
MCF2L-212ENST00000420013 GPRASP1Q5JY77 1395 aa29.64■■■□□ 2.34
MCF2L-212ENST00000420013 HAP1P54257 671 aaPredicted RBP29.63■■■□□ 2.33
MCF2L-212ENST00000420013 PRR36Q9H6K5 1346 aa29.63■■■□□ 2.33
MCF2L-212ENST00000420013 UNC5CLQ8IV45 518 aa29.62■■■□□ 2.33
MCF2L-212ENST00000420013 PMFBP1Q8TBY8 1022 aa29.62■■■□□ 2.33
MCF2L-212ENST00000420013 RALGAPBQ86X10 1494 aa29.61■■■□□ 2.33
MCF2L-212ENST00000420013 GJD4Q96KN9 370 aaPredicted RBP29.61■■■□□ 2.33
MCF2L-212ENST00000420013 NRAPQ86VF7 1730 aa29.6■■■□□ 2.33
MCF2L-212ENST00000420013 EP400Q96L91 3159 aa29.59■■■□□ 2.33
MCF2L-212ENST00000420013 COL14A1Q05707 1796 aaKnown RBP29.59■■■□□ 2.33
MCF2L-212ENST00000420013 LMOD2Q6P5Q4 547 aa29.56■■■□□ 2.32
MCF2L-212ENST00000420013 PHRF1Q9P1Y6 1649 aaKnown RBP29.53■■■□□ 2.32
MCF2L-212ENST00000420013 BRWD3Q6RI45 1802 aa29.53■■■□□ 2.32
MCF2L-212ENST00000420013 CABLES1Q8TDN4 633 aa29.53■■■□□ 2.32
MCF2L-212ENST00000420013 QRICH2Q9H0J4 1663 aa29.52■■■□□ 2.32
MCF2L-212ENST00000420013 NGDNQ8NEJ9 315 aaKnown RBP29.51■■■□□ 2.31
MCF2L-212ENST00000420013 VPS72Q15906 364 aa29.5■■■□□ 2.31
MCF2L-212ENST00000420013 TRPM1Q7Z4N2 1603 aa29.49■■■□□ 2.31
MCF2L-212ENST00000420013 NUDT16Q96DE0 195 aaKnown RBP29.48■■■□□ 2.31
MCF2L-212ENST00000420013 POLR3AO14802 1390 aaPredicted RBP29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms