RNA–Protein interactions for RNA: ENST00000419830.2

USP8-203, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 2,402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-203ENST00000419830 TNNT2P45379 298 aaPredicted RBP11.92□□□□□ -0.5
USP8-203ENST00000419830 CFAP65Q6ZU64 1925 aaKnown RBP11.92□□□□□ -0.5
USP8-203ENST00000419830 ZC3H13Q5T200 1668 aaKnown RBP11.92□□□□□ -0.5
USP8-203ENST00000419830 PPLO60437 1756 aa11.92□□□□□ -0.5
USP8-203ENST00000419830 FRMPD1Q5SYB0 1578 aa11.92□□□□□ -0.5
USP8-203ENST00000419830 TCP11L2Q8N4U5 519 aa11.91□□□□□ -0.5
USP8-203ENST00000419830 RUNDC1Q96C34 613 aa11.91□□□□□ -0.5
USP8-203ENST00000419830 RRP7AQ9Y3A4 280 aaKnown RBP11.91□□□□□ -0.5
USP8-203ENST00000419830 IQSEC2Q5JU85 1478 aa11.91□□□□□ -0.5
USP8-203ENST00000419830 CGNL1Q0VF96 1302 aa11.91□□□□□ -0.5
USP8-203ENST00000419830 COG6Q9Y2V7 657 aa11.91□□□□□ -0.5
USP8-203ENST00000419830 QRICH2Q9H0J4 1663 aa11.91□□□□□ -0.5
USP8-203ENST00000419830 USP19O94966 1318 aa11.9□□□□□ -0.5
USP8-203ENST00000419830 MTHFSP49914 203 aa11.9□□□□□ -0.5
USP8-203ENST00000419830 RARSP54136 660 aaKnown RBP11.9□□□□□ -0.5
USP8-203ENST00000419830 NFKBIBQ15653 356 aa11.9□□□□□ -0.5
USP8-203ENST00000419830 NEUROD2Q15784 382 aa11.9□□□□□ -0.5
USP8-203ENST00000419830 CLUAP1Q96AJ1 413 aa11.9□□□□□ -0.5
USP8-203ENST00000419830 GGT6Q6P531 493 aa11.89□□□□□ -0.51
USP8-203ENST00000419830 NINLQ9Y2I6 1382 aa11.89□□□□□ -0.51
USP8-203ENST00000419830 RLBP1P12271 317 aa11.88□□□□□ -0.51
USP8-203ENST00000419830 TNNQ9UQP3 1299 aa11.88□□□□□ -0.51
USP8-203ENST00000419830 RPGRIP1LQ68CZ1 1315 aa11.88□□□□□ -0.51
USP8-203ENST00000419830 POGZQ7Z3K3 1410 aa11.88□□□□□ -0.51
USP8-203ENST00000419830 WDR63Q8IWG1 891 aa11.88□□□□□ -0.51
USP8-203ENST00000419830 USP32Q8NFA0 1604 aa11.88□□□□□ -0.51
USP8-203ENST00000419830 MLH3Q9UHC1 1453 aa11.88□□□□□ -0.51
USP8-203ENST00000419830 SEC24BO95487 1268 aa11.87□□□□□ -0.51
USP8-203ENST00000419830 CCDC27Q2M243 656 aa11.87□□□□□ -0.51
USP8-203ENST00000419830 FRAT1Q92837 279 aaPredicted RBP11.87□□□□□ -0.51
USP8-203ENST00000419830 ABCC3O15438 1527 aa11.86□□□□□ -0.51
USP8-203ENST00000419830 NUTM2DQ5VT03 806 aaPredicted RBP11.86□□□□□ -0.51
USP8-203ENST00000419830 PUS7Q96PZ0 661 aaKnown RBP11.86□□□□□ -0.51
USP8-203ENST00000419830 PCDHB15Q9Y5E8 787 aa11.86□□□□□ -0.51
USP8-203ENST00000419830 TULP4Q9NRJ4 1543 aa11.86□□□□□ -0.51
USP8-203ENST00000419830 SIGLEC1Q9BZZ2 1709 aa11.85□□□□□ -0.51
USP8-203ENST00000419830 CD109Q6YHK3 1445 aa11.85□□□□□ -0.51
USP8-203ENST00000419830 HECW2Q9P2P5 1572 aa11.85□□□□□ -0.51
USP8-203ENST00000419830 CANXP27824 592 aaKnown RBP11.85□□□□□ -0.51
USP8-203ENST00000419830 GLI2P10070 1586 aa11.84□□□□□ -0.51
USP8-203ENST00000419830 IL27Q8NEV9 243 aa11.84□□□□□ -0.51
USP8-203ENST00000419830 BCL2L13Q9BXK5 485 aa11.84□□□□□ -0.51
USP8-203ENST00000419830 DAXXQ9UER7 740 aaPredicted RBP11.84□□□□□ -0.51
USP8-203ENST00000419830 MAPK8IP3Q9UPT6 1336 aa11.84□□□□□ -0.51
USP8-203ENST00000419830 VIRMAQ69YN4 1812 aaKnown RBP11.84□□□□□ -0.51
USP8-203ENST00000419830 ANKRD36BQ8N2N9 1353 aa11.84□□□□□ -0.51
USP8-203ENST00000419830 NCBP3Q53F19 620 aaKnown RBP11.84□□□□□ -0.51
USP8-203ENST00000419830 EVC2Q86UK5 1308 aa11.83□□□□□ -0.52
USP8-203ENST00000419830 CABP2Q9NPB3 220 aa11.83□□□□□ -0.52
USP8-203ENST00000419830 PIK3C2BO00750 1634 aa11.83□□□□□ -0.52
USP8-203ENST00000419830 ARHGEF28Q8N1W1 1705 aaKnown RBP11.83□□□□□ -0.52
USP8-203ENST00000419830 NEXMIFQ5QGS0 1516 aa11.82□□□□□ -0.52
USP8-203ENST00000419830 GSE1Q14687 1217 aa11.82□□□□□ -0.52
USP8-203ENST00000419830 CFAP53Q96M91 514 aa11.82□□□□□ -0.52
USP8-203ENST00000419830 NLRP1Q9C000 1473 aa11.82□□□□□ -0.52
USP8-203ENST00000419830 VGFO15240 615 aaPredicted RBP11.82□□□□□ -0.52
USP8-203ENST00000419830 AAMPQ13685 434 aa11.82□□□□□ -0.52
USP8-203ENST00000419830 CAMSAP1Q5T5Y3 1602 aa11.82□□□□□ -0.52
USP8-203ENST00000419830 FRAT2O75474 233 aaPredicted RBP11.81□□□□□ -0.52
USP8-203ENST00000419830 U2AF1L5P0DN76 240 aaPredicted RBP11.81□□□□□ -0.52
USP8-203ENST00000419830 U2AF1Q01081 240 aaKnown RBP eCLIP11.81□□□□□ -0.52
USP8-203ENST00000419830 NSD2O96028 1365 aa11.81□□□□□ -0.52
USP8-203ENST00000419830 RAPGEF3O95398 923 aa11.81□□□□□ -0.52
USP8-203ENST00000419830 PMFBP1Q8TBY8 1022 aa11.81□□□□□ -0.52
USP8-203ENST00000419830 PLEKHF1Q96S99 279 aa11.81□□□□□ -0.52
USP8-203ENST00000419830 IDI1Q13907 227 aa11.8□□□□□ -0.52
USP8-203ENST00000419830 PDZRN3Q9UPQ7 1066 aa11.8□□□□□ -0.52
USP8-203ENST00000419830 ADGRB2O60241 1585 aa11.8□□□□□ -0.52
USP8-203ENST00000419830 NPM1P06748 294 aaKnown RBP eCLIP11.8□□□□□ -0.52
USP8-203ENST00000419830 SAFB2Q14151 953 aaKnown RBP eCLIP11.8□□□□□ -0.52
USP8-203ENST00000419830 CFAP74Q9C0B2 1584 aa11.79□□□□□ -0.52
USP8-203ENST00000419830 MYH16Q9H6N6 1097 aa11.79□□□□□ -0.52
USP8-203ENST00000419830 A0A1W2PP64 1363 aa11.79□□□□□ -0.52
USP8-203ENST00000419830 TSR2Q969E8 191 aaKnown RBP11.79□□□□□ -0.52
USP8-203ENST00000419830 ABCC11Q96J66 1382 aa11.78□□□□□ -0.52
USP8-203ENST00000419830 TRIM35Q9UPQ4 493 aa11.78□□□□□ -0.52
USP8-203ENST00000419830 MVPQ14764 893 aaKnown RBP11.78□□□□□ -0.52
USP8-203ENST00000419830 COL3A1P02461 1466 aaPredicted RBP11.78□□□□□ -0.52
USP8-203ENST00000419830 ZFYVE9O95405 1425 aa11.77□□□□□ -0.52
USP8-203ENST00000419830 GGNBP2Q9H3C7 697 aa11.77□□□□□ -0.52
USP8-203ENST00000419830 STK26Q9P289 416 aa11.77□□□□□ -0.52
USP8-203ENST00000419830 ARHGAP31Q2M1Z3 1444 aa11.77□□□□□ -0.53
USP8-203ENST00000419830 ZMYM3Q14202 1370 aa11.77□□□□□ -0.53
USP8-203ENST00000419830 FYB1O15117 783 aa11.77□□□□□ -0.53
USP8-203ENST00000419830 TMPOP42166 694 aaKnown RBP11.77□□□□□ -0.53
USP8-203ENST00000419830 RWDD1Q9H446 243 aaPredicted RBP11.76□□□□□ -0.53
USP8-203ENST00000419830 EXOSC9Q06265 439 aaKnown RBP11.76□□□□□ -0.53
USP8-203ENST00000419830 ZKSCAN2Q63HK3 967 aa11.76□□□□□ -0.53
USP8-203ENST00000419830 CD163L1Q9NR16 1453 aa11.75□□□□□ -0.53
USP8-203ENST00000419830 DIP2CQ9Y2E4 1556 aa11.75□□□□□ -0.53
USP8-203ENST00000419830 DZIP1LQ8IYY4 767 aaKnown RBP11.75□□□□□ -0.53
USP8-203ENST00000419830 TBC1D32Q96NH3 1257 aa11.75□□□□□ -0.53
USP8-203ENST00000419830 BRPF3Q9ULD4 1205 aa11.75□□□□□ -0.53
USP8-203ENST00000419830 PTPRMP28827 1452 aa11.75□□□□□ -0.53
USP8-203ENST00000419830 CT47B1P0C2W7 299 aaPredicted RBP11.75□□□□□ -0.53
USP8-203ENST00000419830 SSH1Q8WYL5 1049 aa11.75□□□□□ -0.53
USP8-203ENST00000419830 ANTXR1Q9H6X2 564 aa11.75□□□□□ -0.53
USP8-203ENST00000419830 U2SURPO15042 1029 aaKnown RBP11.74□□□□□ -0.53
USP8-203ENST00000419830 TRIM27P14373 513 aa11.74□□□□□ -0.53
USP8-203ENST00000419830 SRPK2P78362 688 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms