RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 RTN4Q9NQC3 1192 aaKnown RBP10.54□□□□□ -0.72
UBR4-206ENST00000419533 ARAP3Q8WWN8 1544 aa10.53□□□□□ -0.72
UBR4-206ENST00000419533 USP47Q96K76 1375 aa10.53□□□□□ -0.72
UBR4-206ENST00000419533 MSH5O43196 834 aa10.53□□□□□ -0.72
UBR4-206ENST00000419533 CADPS2Q86UW7 1296 aa10.53□□□□□ -0.72
UBR4-206ENST00000419533 TCOF1Q13428 1488 aaKnown RBP10.53□□□□□ -0.72
UBR4-206ENST00000419533 MLH3Q9UHC1 1453 aa10.53□□□□□ -0.72
UBR4-206ENST00000419533 LRPPRCP42704 1394 aaKnown RBP10.52□□□□□ -0.72
UBR4-206ENST00000419533 PTMSP20962 102 aa10.52□□□□□ -0.73
UBR4-206ENST00000419533 NEXNQ0ZGT2 675 aa10.52□□□□□ -0.73
UBR4-206ENST00000419533 TMEM132EQ6IEE7 984 aa10.52□□□□□ -0.73
UBR4-206ENST00000419533 NCKAP5LQ9HCH0 1330 aa10.51□□□□□ -0.73
UBR4-206ENST00000419533 DIAPH1O60610 1272 aaKnown RBP10.51□□□□□ -0.73
UBR4-206ENST00000419533 NAIPQ13075 1403 aa10.51□□□□□ -0.73
UBR4-206ENST00000419533 YEATS2Q9ULM3 1422 aa10.51□□□□□ -0.73
UBR4-206ENST00000419533 HSP90B1P14625 803 aaKnown RBP10.51□□□□□ -0.73
UBR4-206ENST00000419533 CLUAP1Q96AJ1 413 aa10.51□□□□□ -0.73
UBR4-206ENST00000419533 AMOTL2Q9Y2J4 779 aa10.51□□□□□ -0.73
UBR4-206ENST00000419533 GLI2P10070 1586 aa10.51□□□□□ -0.73
UBR4-206ENST00000419533 HECW2Q9P2P5 1572 aa10.51□□□□□ -0.73
UBR4-206ENST00000419533 CCDC34Q96HJ3 373 aa10.51□□□□□ -0.73
UBR4-206ENST00000419533 LMTK3Q96Q04 1460 aa10.5□□□□□ -0.73
UBR4-206ENST00000419533 CFAP70Q5T0N1 1121 aa10.5□□□□□ -0.73
UBR4-206ENST00000419533 RRP7AQ9Y3A4 280 aaKnown RBP10.5□□□□□ -0.73
UBR4-206ENST00000419533 TCERG1O14776 1098 aaKnown RBP10.5□□□□□ -0.73
UBR4-206ENST00000419533 PRAM1Q96QH2 718 aa10.5□□□□□ -0.73
UBR4-206ENST00000419533 NUTM2BA6NNL0 878 aaPredicted RBP10.5□□□□□ -0.73
UBR4-206ENST00000419533 NUTM2EB1AL46 878 aaPredicted RBP10.5□□□□□ -0.73
UBR4-206ENST00000419533 NUTM2AQ8IVF1 878 aaPredicted RBP10.5□□□□□ -0.73
UBR4-206ENST00000419533 TTC37Q6PGP7 1564 aa10.49□□□□□ -0.73
UBR4-206ENST00000419533 E9PSI1 815 aa10.49□□□□□ -0.73
UBR4-206ENST00000419533 SF3B2Q13435 895 aaKnown RBP10.49□□□□□ -0.73
UBR4-206ENST00000419533 RIMS2Q9UQ26 1411 aa10.49□□□□□ -0.73
UBR4-206ENST00000419533 GBP4Q96PP9 640 aa10.49□□□□□ -0.73
UBR4-206ENST00000419533 ARHGEF5Q12774 1597 aa10.49□□□□□ -0.73
UBR4-206ENST00000419533 L1TD1Q5T7N2 865 aaKnown RBP10.49□□□□□ -0.73
UBR4-206ENST00000419533 SPRYD3Q8NCJ5 442 aa10.49□□□□□ -0.73
UBR4-206ENST00000419533 NGEFQ8N5V2 710 aa10.48□□□□□ -0.73
UBR4-206ENST00000419533 RAPGEF4Q8WZA2 1011 aa10.48□□□□□ -0.73
UBR4-206ENST00000419533 TOMM22Q9NS69 142 aa10.48□□□□□ -0.73
UBR4-206ENST00000419533 ABCC1P33527 1531 aa10.48□□□□□ -0.73
UBR4-206ENST00000419533 SYTL4Q96C24 671 aaPredicted RBP10.48□□□□□ -0.73
UBR4-206ENST00000419533 PREX2Q70Z35 1606 aa10.48□□□□□ -0.73
UBR4-206ENST00000419533 DDX58O95786 925 aaKnown RBP10.48□□□□□ -0.73
UBR4-206ENST00000419533 LRRFIP1Q32MZ4 808 aaKnown RBP10.48□□□□□ -0.73
UBR4-206ENST00000419533 ABCA9Q8IUA7 1624 aa10.48□□□□□ -0.73
UBR4-206ENST00000419533 DRC7Q8IY82 874 aa10.47□□□□□ -0.73
UBR4-206ENST00000419533 ZNF692Q9BU19 519 aaPredicted RBP10.47□□□□□ -0.73
UBR4-206ENST00000419533 NOL10Q9BSC4 688 aaKnown RBP10.47□□□□□ -0.73
UBR4-206ENST00000419533 KIF3AQ9Y496 699 aa10.47□□□□□ -0.73
UBR4-206ENST00000419533 CHAF1AQ13111 956 aaPredicted RBP10.46□□□□□ -0.73
UBR4-206ENST00000419533 ZKSCAN2Q63HK3 967 aa10.46□□□□□ -0.73
UBR4-206ENST00000419533 ELL2O00472 640 aaPredicted RBP10.46□□□□□ -0.73
UBR4-206ENST00000419533 MFAP1P55081 439 aaKnown RBP10.46□□□□□ -0.73
UBR4-206ENST00000419533 EIF2S2P20042 333 aaKnown RBP10.46□□□□□ -0.74
UBR4-206ENST00000419533 CHMP4CQ96CF2 233 aa10.46□□□□□ -0.74
UBR4-206ENST00000419533 DIP2BQ9P265 1576 aa10.45□□□□□ -0.74
UBR4-206ENST00000419533 KIAA2012Q0VF49 1180 aa10.45□□□□□ -0.74
UBR4-206ENST00000419533 NAP1L5Q96NT1 182 aaPredicted RBP10.45□□□□□ -0.74
UBR4-206ENST00000419533 C9orf78Q9NZ63 289 aaPredicted RBP10.45□□□□□ -0.74
UBR4-206ENST00000419533 DNMT1P26358 1616 aaKnown RBP10.45□□□□□ -0.74
UBR4-206ENST00000419533 CSPP1Q1MSJ5 1256 aa10.45□□□□□ -0.74
UBR4-206ENST00000419533 AMOTL1Q8IY63 956 aa10.45□□□□□ -0.74
UBR4-206ENST00000419533 SAMD9LQ8IVG5 1584 aa10.45□□□□□ -0.74
UBR4-206ENST00000419533 SYAP1Q96A49 352 aaPredicted RBP10.45□□□□□ -0.74
UBR4-206ENST00000419533 ABTB2Q8N961 1025 aa10.44□□□□□ -0.74
UBR4-206ENST00000419533 HMGB2P26583 209 aaKnown RBP10.44□□□□□ -0.74
UBR4-206ENST00000419533 TPM4P67936 248 aa10.44□□□□□ -0.74
UBR4-206ENST00000419533 NLRP6P59044 892 aa10.44□□□□□ -0.74
UBR4-206ENST00000419533 RASSF8Q8NHQ8 419 aa10.44□□□□□ -0.74
UBR4-206ENST00000419533 NLRP2Q9NX02 1062 aa10.44□□□□□ -0.74
UBR4-206ENST00000419533 RIPK4P57078 832 aa10.43□□□□□ -0.74
UBR4-206ENST00000419533 KDM5DQ9BY66 1539 aa10.43□□□□□ -0.74
UBR4-206ENST00000419533 API5Q9BZZ5 524 aaKnown RBP10.43□□□□□ -0.74
UBR4-206ENST00000419533 CDK19Q9BWU1 502 aa10.43□□□□□ -0.74
UBR4-206ENST00000419533 TRIM34Q9BYJ4 488 aa10.43□□□□□ -0.74
UBR4-206ENST00000419533 PRKRIP1Q9H875 184 aaPredicted RBP10.43□□□□□ -0.74
UBR4-206ENST00000419533 TBX22Q9Y458 520 aa10.43□□□□□ -0.74
UBR4-206ENST00000419533 KIF16BQ96L93 1317 aa10.42□□□□□ -0.74
UBR4-206ENST00000419533 ST18O60284 1047 aa10.42□□□□□ -0.74
UBR4-206ENST00000419533 MARCH6O60337 910 aa10.42□□□□□ -0.74
UBR4-206ENST00000419533 ADGRL2O95490 1459 aa10.42□□□□□ -0.74
UBR4-206ENST00000419533 DCAF8L1A6NGE4 600 aa10.42□□□□□ -0.74
UBR4-206ENST00000419533 CABP2Q9NPB3 220 aa10.42□□□□□ -0.74
UBR4-206ENST00000419533 KCNA6P17658 529 aa10.42□□□□□ -0.74
UBR4-206ENST00000419533 RUNDC1Q96C34 613 aa10.42□□□□□ -0.74
UBR4-206ENST00000419533 C19orf44Q9H6X5 657 aa10.42□□□□□ -0.74
UBR4-206ENST00000419533 NOS1P29475 1434 aa10.41□□□□□ -0.74
UBR4-206ENST00000419533 GNAI1P63096 354 aa10.41□□□□□ -0.74
UBR4-206ENST00000419533 ATAD2Q6PL18 1390 aa10.41□□□□□ -0.74
UBR4-206ENST00000419533 NLRP1Q9C000 1473 aa10.41□□□□□ -0.74
UBR4-206ENST00000419533 APAF1O14727 1248 aa10.41□□□□□ -0.74
UBR4-206ENST00000419533 VPS37DQ86XT2 251 aa10.41□□□□□ -0.74
UBR4-206ENST00000419533 WASHC2AQ641Q2 1341 aa10.41□□□□□ -0.74
UBR4-206ENST00000419533 VPS53Q5VIR6 699 aa10.4□□□□□ -0.74
UBR4-206ENST00000419533 RILPL2Q969X0 211 aa10.4□□□□□ -0.74
UBR4-206ENST00000419533 TSPYL4Q9UJ04 414 aa10.4□□□□□ -0.74
UBR4-206ENST00000419533 PHF8Q9UPP1 1060 aa10.4□□□□□ -0.74
UBR4-206ENST00000419533 SYNE3Q6ZMZ3 975 aa10.4□□□□□ -0.74
UBR4-206ENST00000419533 MSNP26038 577 aaKnown RBP10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms