RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 CDC42BPGQ6DT37 1551 aa25.32■■□□□ 1.64
EPCAM-203ENST00000419334 NBPF1Q3BBV0 1214 aa25.32■■□□□ 1.64
EPCAM-203ENST00000419334 SLAIN2Q9P270 581 aa25.32■■□□□ 1.64
EPCAM-203ENST00000419334 TRAK1Q9UPV9 953 aa25.32■■□□□ 1.64
EPCAM-203ENST00000419334 MST1RQ04912 1400 aa25.3■■□□□ 1.64
EPCAM-203ENST00000419334 NBPF8Q3BBV2 869 aa25.3■■□□□ 1.64
EPCAM-203ENST00000419334 PRAM1Q96QH2 718 aa25.3■■□□□ 1.64
EPCAM-203ENST00000419334 TIMELESSQ9UNS1 1208 aa25.28■■□□□ 1.64
EPCAM-203ENST00000419334 POGKQ9P215 609 aa25.27■■□□□ 1.64
EPCAM-203ENST00000419334 ADGRB2O60241 1585 aa25.26■■□□□ 1.63
EPCAM-203ENST00000419334 ROCK2O75116 1388 aaKnown RBP25.25■■□□□ 1.63
EPCAM-203ENST00000419334 FMN2Q9NZ56 1722 aa25.24■■□□□ 1.63
EPCAM-203ENST00000419334 RALGAPBQ86X10 1494 aa25.24■■□□□ 1.63
EPCAM-203ENST00000419334 GPRASP1Q5JY77 1395 aa25.24■■□□□ 1.63
EPCAM-203ENST00000419334 SAFB2Q14151 953 aaKnown RBP eCLIP25.22■■□□□ 1.63
EPCAM-203ENST00000419334 C1orf167Q5SNV9 1468 aa25.21■■□□□ 1.63
EPCAM-203ENST00000419334 HSPA1LP34931 641 aa25.21■■□□□ 1.63
EPCAM-203ENST00000419334 BRINP3Q76B58 766 aa25.18■■□□□ 1.62
EPCAM-203ENST00000419334 AHDC1Q5TGY3 1603 aaPredicted RBP25.17■■□□□ 1.62
EPCAM-203ENST00000419334 PHLPP1O60346 1717 aa25.16■■□□□ 1.62
EPCAM-203ENST00000419334 QRICH2Q9H0J4 1663 aa25.16■■□□□ 1.62
EPCAM-203ENST00000419334 NHSL1Q5SYE7 1610 aa25.15■■□□□ 1.62
EPCAM-203ENST00000419334 MINK1Q8N4C8 1332 aaPredicted RBP25.15■■□□□ 1.62
EPCAM-203ENST00000419334 CENPJQ9HC77 1338 aaPredicted RBP25.13■■□□□ 1.61
EPCAM-203ENST00000419334 RGPD8O14715 1765 aaPredicted RBP25.13■■□□□ 1.61
EPCAM-203ENST00000419334 HIRIP3Q9BW71 556 aaPredicted RBP25.13■■□□□ 1.61
EPCAM-203ENST00000419334 EIF3AQ14152 1382 aaKnown RBP25.13■■□□□ 1.61
EPCAM-203ENST00000419334 CARD11Q9BXL7 1154 aa25.12■■□□□ 1.61
EPCAM-203ENST00000419334 COL16A1Q07092 1604 aaPredicted RBP25.11■■□□□ 1.61
EPCAM-203ENST00000419334 USP32Q8NFA0 1604 aa25.11■■□□□ 1.61
EPCAM-203ENST00000419334 ANKARQ7Z5J8 1434 aa25.11■■□□□ 1.61
EPCAM-203ENST00000419334 WASLO00401 505 aaPredicted RBP25.1■■□□□ 1.61
EPCAM-203ENST00000419334 ORAI2Q96SN7 254 aa25.1■■□□□ 1.61
EPCAM-203ENST00000419334 TULP4Q9NRJ4 1543 aa25.1■■□□□ 1.61
EPCAM-203ENST00000419334 NUTM2FA1L443 756 aa25.09■■□□□ 1.61
EPCAM-203ENST00000419334 KIF1AQ12756 1690 aa25.09■■□□□ 1.61
EPCAM-203ENST00000419334 ESCO1Q5FWF5 840 aa25.07■■□□□ 1.6
EPCAM-203ENST00000419334 DISP3Q9P2K9 1392 aa25.05■■□□□ 1.6
EPCAM-203ENST00000419334 ITSN1Q15811 1721 aa25.04■■□□□ 1.6
EPCAM-203ENST00000419334 ATP7BP35670 1465 aa25.02■■□□□ 1.6
EPCAM-203ENST00000419334 CDK19Q9BWU1 502 aa25.02■■□□□ 1.6
EPCAM-203ENST00000419334 PRR36Q9H6K5 1346 aa25.02■■□□□ 1.6
EPCAM-203ENST00000419334 SBNO2Q9Y2G9 1366 aa25.02■■□□□ 1.6
EPCAM-203ENST00000419334 DDX17Q92841 729 aaKnown RBP25■■□□□ 1.59
EPCAM-203ENST00000419334 NPHP3Q7Z494 1330 aa25■■□□□ 1.59
EPCAM-203ENST00000419334 TOPAZ1Q8N9V7 1692 aa25■■□□□ 1.59
EPCAM-203ENST00000419334 SOS2Q07890 1332 aaPredicted RBP24.99■■□□□ 1.59
EPCAM-203ENST00000419334 PHF8Q9UPP1 1060 aa24.99■■□□□ 1.59
EPCAM-203ENST00000419334 SHPRHQ149N8 1683 aa24.98■■□□□ 1.59
EPCAM-203ENST00000419334 JCADQ9P266 1359 aa24.98■■□□□ 1.59
EPCAM-203ENST00000419334 PXDNQ92626 1479 aa24.97■■□□□ 1.59
EPCAM-203ENST00000419334 NUDT16Q96DE0 195 aaKnown RBP24.97■■□□□ 1.59
EPCAM-203ENST00000419334 EVC2Q86UK5 1308 aa24.96■■□□□ 1.59
EPCAM-203ENST00000419334 FOXO3O43524 673 aa24.96■■□□□ 1.59
EPCAM-203ENST00000419334 SOCS7O14512 581 aa24.95■■□□□ 1.58
EPCAM-203ENST00000419334 LRRC59Q96AG4 307 aaKnown RBP24.95■■□□□ 1.58
EPCAM-203ENST00000419334 USP47Q96K76 1375 aa24.94■■□□□ 1.58
EPCAM-203ENST00000419334 SRPK2P78362 688 aaKnown RBP24.94■■□□□ 1.58
EPCAM-203ENST00000419334 ILDR2Q71H61 639 aa24.92■■□□□ 1.58
EPCAM-203ENST00000419334 PMFBP1Q8TBY8 1022 aa24.92■■□□□ 1.58
EPCAM-203ENST00000419334 CABP2Q9NPB3 220 aa24.92■■□□□ 1.58
EPCAM-203ENST00000419334 CCDC61Q9Y6R9 512 aa24.92■■□□□ 1.58
EPCAM-203ENST00000419334 ST20-MTHFSA0A0A6YYL1 179 aa24.91■■□□□ 1.58
EPCAM-203ENST00000419334 MED1Q15648 1581 aaPredicted RBP24.9■■□□□ 1.58
EPCAM-203ENST00000419334 TESK2Q96S53 571 aa24.89■■□□□ 1.58
EPCAM-203ENST00000419334 XPCQ01831 940 aaPredicted RBP24.88■■□□□ 1.57
EPCAM-203ENST00000419334 KRT28Q7Z3Y7 464 aa24.88■■□□□ 1.57
EPCAM-203ENST00000419334 PNPLA6Q8IY17 1366 aa24.88■■□□□ 1.57
EPCAM-203ENST00000419334 SPATA31A6Q5VVP1 1343 aa24.87■■□□□ 1.57
EPCAM-203ENST00000419334 PPIP5K1Q6PFW1 1433 aa24.87■■□□□ 1.57
EPCAM-203ENST00000419334 TRPM3Q9HCF6 1732 aaPredicted RBP24.87■■□□□ 1.57
EPCAM-203ENST00000419334 PLEKHG3A1L390 1219 aa24.87■■□□□ 1.57
EPCAM-203ENST00000419334 SLC24A1O60721 1099 aa24.87■■□□□ 1.57
EPCAM-203ENST00000419334 COL22A1Q8NFW1 1626 aaPredicted RBP24.86■■□□□ 1.57
EPCAM-203ENST00000419334 POLR3AO14802 1390 aaPredicted RBP24.86■■□□□ 1.57
EPCAM-203ENST00000419334 PSME1Q06323 249 aa24.86■■□□□ 1.57
EPCAM-203ENST00000419334 SBNO1A3KN83 1393 aa24.85■■□□□ 1.57
EPCAM-203ENST00000419334 ATAD2Q6PL18 1390 aa24.85■■□□□ 1.57
EPCAM-203ENST00000419334 NGDNQ8NEJ9 315 aaKnown RBP24.85■■□□□ 1.57
EPCAM-203ENST00000419334 TNS3Q68CZ2 1445 aa24.83■■□□□ 1.57
EPCAM-203ENST00000419334 SPATA31A3Q5VYP0 1347 aa24.83■■□□□ 1.56
EPCAM-203ENST00000419334 ACEP12821 1306 aa24.82■■□□□ 1.56
EPCAM-203ENST00000419334 PUS7Q96PZ0 661 aaKnown RBP24.81■■□□□ 1.56
EPCAM-203ENST00000419334 ALS2Q96Q42 1657 aa24.81■■□□□ 1.56
EPCAM-203ENST00000419334 LRP6O75581 1613 aa24.8■■□□□ 1.56
EPCAM-203ENST00000419334 CABP1Q9NZU7 370 aa24.79■■□□□ 1.56
EPCAM-203ENST00000419334 AKAP12Q02952 1782 aa24.78■■□□□ 1.56
EPCAM-203ENST00000419334 EIF4G2P78344 907 aaKnown RBP eCLIP24.77■■□□□ 1.56
EPCAM-203ENST00000419334 TMF1P82094 1093 aa24.77■■□□□ 1.56
EPCAM-203ENST00000419334 ARHGEF10O15013 1369 aa24.77■■□□□ 1.56
EPCAM-203ENST00000419334 BRD4O60885 1362 aaPredicted RBP24.74■■□□□ 1.55
EPCAM-203ENST00000419334 USP6P35125 1406 aa24.73■■□□□ 1.55
EPCAM-203ENST00000419334 NUTM2BA6NNL0 878 aaPredicted RBP24.73■■□□□ 1.55
EPCAM-203ENST00000419334 NUTM2EB1AL46 878 aaPredicted RBP24.73■■□□□ 1.55
EPCAM-203ENST00000419334 NUTM2AQ8IVF1 878 aaPredicted RBP24.73■■□□□ 1.55
EPCAM-203ENST00000419334 ABCA3Q99758 1704 aa24.72■■□□□ 1.55
EPCAM-203ENST00000419334 CPSF1Q10570 1443 aaKnown RBP24.72■■□□□ 1.55
EPCAM-203ENST00000419334 HSPA5P11021 654 aaKnown RBP24.72■■□□□ 1.55
EPCAM-203ENST00000419334 NINLQ9Y2I6 1382 aa24.71■■□□□ 1.55
EPCAM-203ENST00000419334 MON2Q7Z3U7 1717 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms