RNA–Protein interactions for RNA: ENST00000419180.6

NPIPB3-201, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-201ENST00000419180 SPHKAPQ2M3C7 1700 aa12.05□□□□□ -0.48
NPIPB3-201ENST00000419180 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.05□□□□□ -0.48
NPIPB3-201ENST00000419180 MARF1Q9Y4F3 1742 aaKnown RBP12.05□□□□□ -0.48
NPIPB3-201ENST00000419180 CHGAP10645 457 aaKnown RBP12.04□□□□□ -0.48
NPIPB3-201ENST00000419180 SOS2Q07890 1332 aaPredicted RBP12.04□□□□□ -0.48
NPIPB3-201ENST00000419180 IQGAP3Q86VI3 1631 aa12.04□□□□□ -0.48
NPIPB3-201ENST00000419180 GLI3P10071 1580 aa12.03□□□□□ -0.48
NPIPB3-201ENST00000419180 DEFB132Q7Z7B7 95 aa12.02□□□□□ -0.49
NPIPB3-201ENST00000419180 CHIC2Q9UKJ5 165 aa12.02□□□□□ -0.49
NPIPB3-201ENST00000419180 BRWD3Q6RI45 1802 aa12.01□□□□□ -0.49
NPIPB3-201ENST00000419180 METP08581 1390 aa12.01□□□□□ -0.49
NPIPB3-201ENST00000419180 ANKRD50Q9ULJ7 1429 aa12.01□□□□□ -0.49
NPIPB3-201ENST00000419180 GJD4Q96KN9 370 aaPredicted RBP12□□□□□ -0.49
NPIPB3-201ENST00000419180 RALGAPBQ86X10 1494 aa12□□□□□ -0.49
NPIPB3-201ENST00000419180 ORAI2Q96SN7 254 aa11.97□□□□□ -0.49
NPIPB3-201ENST00000419180 SLIT2O94813 1529 aa11.96□□□□□ -0.49
NPIPB3-201ENST00000419180 PXDNQ92626 1479 aa11.96□□□□□ -0.49
NPIPB3-201ENST00000419180 PSDA5PKW4 1024 aaPredicted RBP11.96□□□□□ -0.49
NPIPB3-201ENST00000419180 HRCP23327 699 aa11.96□□□□□ -0.49
NPIPB3-201ENST00000419180 SF3B2Q13435 895 aaKnown RBP11.95□□□□□ -0.5
NPIPB3-201ENST00000419180 PRAG1Q86YV5 1406 aa11.94□□□□□ -0.5
NPIPB3-201ENST00000419180 NEXMIFQ5QGS0 1516 aa11.93□□□□□ -0.5
NPIPB3-201ENST00000419180 USP32Q8NFA0 1604 aa11.93□□□□□ -0.5
NPIPB3-201ENST00000419180 CDC42BPGQ6DT37 1551 aa11.92□□□□□ -0.5
NPIPB3-201ENST00000419180 UNC5CLQ8IV45 518 aa11.92□□□□□ -0.5
NPIPB3-201ENST00000419180 ROBO2Q9HCK4 1378 aa11.92□□□□□ -0.5
NPIPB3-201ENST00000419180 NPHP3Q7Z494 1330 aa11.91□□□□□ -0.5
NPIPB3-201ENST00000419180 PLCH1Q4KWH8 1693 aa11.91□□□□□ -0.5
NPIPB3-201ENST00000419180 SEPT12Q8IYM1 358 aa11.9□□□□□ -0.5
NPIPB3-201ENST00000419180 RGPD1P0DJD0 1748 aa11.89□□□□□ -0.51
NPIPB3-201ENST00000419180 KCNA4P22459 653 aa11.89□□□□□ -0.51
NPIPB3-201ENST00000419180 NWD2Q9ULI1 1742 aa11.89□□□□□ -0.51
NPIPB3-201ENST00000419180 YY1P25490 414 aa11.88□□□□□ -0.51
NPIPB3-201ENST00000419180 BAG6P46379 1132 aa11.88□□□□□ -0.51
NPIPB3-201ENST00000419180 HOMEZQ8IX15 550 aa11.88□□□□□ -0.51
NPIPB3-201ENST00000419180 HFM1A2PYH4 1435 aa11.87□□□□□ -0.51
NPIPB3-201ENST00000419180 ZNF326Q5BKZ1 582 aaKnown RBP11.87□□□□□ -0.51
NPIPB3-201ENST00000419180 CLTCL1P53675 1640 aa11.86□□□□□ -0.51
NPIPB3-201ENST00000419180 TNS1Q9HBL0 1735 aaKnown RBP11.86□□□□□ -0.51
NPIPB3-201ENST00000419180 XPCQ01831 940 aaPredicted RBP11.86□□□□□ -0.51
NPIPB3-201ENST00000419180 KRT27Q7Z3Y8 459 aa11.86□□□□□ -0.51
NPIPB3-201ENST00000419180 TIMELESSQ9UNS1 1208 aa11.86□□□□□ -0.51
NPIPB3-201ENST00000419180 ABCA3Q99758 1704 aa11.86□□□□□ -0.51
NPIPB3-201ENST00000419180 ONECUT3O60422 494 aaPredicted RBP11.85□□□□□ -0.51
NPIPB3-201ENST00000419180 R3HDM1Q15032 1099 aaKnown RBP11.85□□□□□ -0.51
NPIPB3-201ENST00000419180 VPS72Q15906 364 aa11.85□□□□□ -0.51
NPIPB3-201ENST00000419180 ESCO1Q5FWF5 840 aa11.85□□□□□ -0.51
NPIPB3-201ENST00000419180 DISP2A7MBM2 1401 aa11.85□□□□□ -0.51
NPIPB3-201ENST00000419180 FOXO3O43524 673 aa11.84□□□□□ -0.51
NPIPB3-201ENST00000419180 KIF1AQ12756 1690 aa11.84□□□□□ -0.51
NPIPB3-201ENST00000419180 NRAPQ86VF7 1730 aa11.83□□□□□ -0.52
NPIPB3-201ENST00000419180 NUP155O75694 1391 aa11.83□□□□□ -0.52
NPIPB3-201ENST00000419180 LRPPRCP42704 1394 aaKnown RBP11.83□□□□□ -0.52
NPIPB3-201ENST00000419180 EN1Q05925 392 aaPredicted RBP11.83□□□□□ -0.52
NPIPB3-201ENST00000419180 SPATA31A3Q5VYP0 1347 aa11.83□□□□□ -0.52
NPIPB3-201ENST00000419180 FAM50AQ14320 339 aaKnown RBP11.82□□□□□ -0.52
NPIPB3-201ENST00000419180 ADGRB2O60241 1585 aa11.82□□□□□ -0.52
NPIPB3-201ENST00000419180 KIF1BO60333 1816 aa11.81□□□□□ -0.52
NPIPB3-201ENST00000419180 CCDC144AA2RUR9 1427 aa11.81□□□□□ -0.52
NPIPB3-201ENST00000419180 ROCK1Q13464 1354 aa11.8□□□□□ -0.52
NPIPB3-201ENST00000419180 FMN2Q9NZ56 1722 aa11.8□□□□□ -0.52
NPIPB3-201ENST00000419180 NAIPQ13075 1403 aa11.8□□□□□ -0.52
NPIPB3-201ENST00000419180 CCDC9Q9Y3X0 531 aaKnown RBP11.8□□□□□ -0.52
NPIPB3-201ENST00000419180 TNS3Q68CZ2 1445 aa11.79□□□□□ -0.52
NPIPB3-201ENST00000419180 THSD7AQ9UPZ6 1657 aa11.79□□□□□ -0.52
NPIPB3-201ENST00000419180 RREB1Q92766 1687 aa11.78□□□□□ -0.52
NPIPB3-201ENST00000419180 A0A0G2JS52 829 aa11.78□□□□□ -0.52
NPIPB3-201ENST00000419180 NUP188Q5SRE5 1749 aa11.77□□□□□ -0.53
NPIPB3-201ENST00000419180 PPLO60437 1756 aa11.77□□□□□ -0.53
NPIPB3-201ENST00000419180 CAMTA1Q9Y6Y1 1673 aa11.76□□□□□ -0.53
NPIPB3-201ENST00000419180 NUTM2FA1L443 756 aa11.76□□□□□ -0.53
NPIPB3-201ENST00000419180 EIF5BO60841 1220 aaKnown RBP11.76□□□□□ -0.53
NPIPB3-201ENST00000419180 HAP1P54257 671 aaPredicted RBP11.76□□□□□ -0.53
NPIPB3-201ENST00000419180 EZH2Q15910 746 aaKnown RBP11.76□□□□□ -0.53
NPIPB3-201ENST00000419180 FAM98CQ17RN3 349 aaKnown RBP11.76□□□□□ -0.53
NPIPB3-201ENST00000419180 TECPR2O15040 1411 aa11.76□□□□□ -0.53
NPIPB3-201ENST00000419180 KNDC1Q76NI1 1749 aa11.75□□□□□ -0.53
NPIPB3-201ENST00000419180 FAM182BQ5T319 152 aa11.75□□□□□ -0.53
NPIPB3-201ENST00000419180 CABLES1Q8TDN4 633 aa11.75□□□□□ -0.53
NPIPB3-201ENST00000419180 VGFO15240 615 aaPredicted RBP11.74□□□□□ -0.53
NPIPB3-201ENST00000419180 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
NPIPB3-201ENST00000419180 PARD3Q8TEW0 1356 aa11.74□□□□□ -0.53
NPIPB3-201ENST00000419180 NINLQ9Y2I6 1382 aa11.74□□□□□ -0.53
NPIPB3-201ENST00000419180 IFT172Q9UG01 1749 aa11.74□□□□□ -0.53
NPIPB3-201ENST00000419180 COL14A1Q05707 1796 aaKnown RBP11.74□□□□□ -0.53
NPIPB3-201ENST00000419180 KRT28Q7Z3Y7 464 aa11.73□□□□□ -0.53
NPIPB3-201ENST00000419180 CAMKK2Q96RR4 588 aa11.73□□□□□ -0.53
NPIPB3-201ENST00000419180 SBNO1A3KN83 1393 aa11.72□□□□□ -0.53
NPIPB3-201ENST00000419180 PPP4R3CPQ6ZMV5 832 aa11.72□□□□□ -0.53
NPIPB3-201ENST00000419180 RGPD8O14715 1765 aaPredicted RBP11.72□□□□□ -0.53
NPIPB3-201ENST00000419180 NRXN1Q9ULB1 1477 aa11.71□□□□□ -0.53
NPIPB3-201ENST00000419180 ARHGEF10O15013 1369 aa11.71□□□□□ -0.53
NPIPB3-201ENST00000419180 PLEKHH1Q9ULM0 1364 aa11.71□□□□□ -0.53
NPIPB3-201ENST00000419180 FAM83GA6ND36 823 aa11.71□□□□□ -0.53
NPIPB3-201ENST00000419180 PLEKHG5O94827 1062 aa11.71□□□□□ -0.53
NPIPB3-201ENST00000419180 SENP3-EIF4A1A0A087X0R7 540 aa11.7□□□□□ -0.54
NPIPB3-201ENST00000419180 LOC105371045A0A1W2PR82 267 aa11.7□□□□□ -0.54
NPIPB3-201ENST00000419180 WAPLQ7Z5K2 1190 aa11.7□□□□□ -0.54
NPIPB3-201ENST00000419180 TAOK2Q9UL54 1235 aa11.7□□□□□ -0.54
NPIPB3-201ENST00000419180 RRBP1Q9P2E9 1410 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms