RNA–Protein interactions for RNA: ENST00000418664.2

DSP-202, Transcript of desmoplakin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DSP, Length 7,812 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-202ENST00000418664 FAM114A1Q8IWE2 563 aa14.13□□□□□ -0.15
DSP-202ENST00000418664 SMARCE1Q969G3 411 aa14.13□□□□□ -0.15
DSP-202ENST00000418664 VPS37CA5D8V6 355 aaPredicted RBP14.13□□□□□ -0.15
DSP-202ENST00000418664 SPAG9O60271 1321 aaKnown RBP14.13□□□□□ -0.15
DSP-202ENST00000418664 ERICH2A1L162 156 aa14.13□□□□□ -0.15
DSP-202ENST00000418664 TMCO3Q6UWJ1 677 aa14.12□□□□□ -0.15
DSP-202ENST00000418664 NASPP49321 788 aaPredicted RBP14.12□□□□□ -0.15
DSP-202ENST00000418664 TRIM5Q9C035 493 aa14.12□□□□□ -0.15
DSP-202ENST00000418664 IRX3P78415 501 aaPredicted RBP14.11□□□□□ -0.15
DSP-202ENST00000418664 ANO2Q9NQ90 1003 aa14.11□□□□□ -0.15
DSP-202ENST00000418664 STK26Q9P289 416 aa14.11□□□□□ -0.15
DSP-202ENST00000418664 MRVI1Q9Y6F6 885 aa14.11□□□□□ -0.15
DSP-202ENST00000418664 UQCRHLA0A096LP55 91 aa14.11□□□□□ -0.15
DSP-202ENST00000418664 UQCRHP07919 91 aa14.11□□□□□ -0.15
DSP-202ENST00000418664 WDR66Q8TBY9 1149 aa14.11□□□□□ -0.15
DSP-202ENST00000418664 NAT10Q9H0A0 1025 aaKnown RBP14.11□□□□□ -0.15
DSP-202ENST00000418664 COMMD10Q9Y6G5 202 aa14.11□□□□□ -0.15
DSP-202ENST00000418664 KIF3CO14782 793 aa14.1□□□□□ -0.15
DSP-202ENST00000418664 FMNL2Q96PY5 1086 aa14.1□□□□□ -0.15
DSP-202ENST00000418664 CCDC73Q6ZRK6 1079 aa14.1□□□□□ -0.15
DSP-202ENST00000418664 TTC36A6NLP5 189 aa14.09□□□□□ -0.15
DSP-202ENST00000418664 MATR3P43243 847 aaKnown RBP eCLIP14.09□□□□□ -0.15
DSP-202ENST00000418664 CLUAP1Q96AJ1 413 aa14.09□□□□□ -0.15
DSP-202ENST00000418664 KIF3BO15066 747 aa14.09□□□□□ -0.15
DSP-202ENST00000418664 TCHPQ9BT92 498 aa14.09□□□□□ -0.15
DSP-202ENST00000418664 MAGEC2Q9UBF1 373 aaPredicted RBP14.09□□□□□ -0.15
DSP-202ENST00000418664 RCAN3Q9UKA8 241 aa14.09□□□□□ -0.15
DSP-202ENST00000418664 ERLIN1O75477 346 aa14.09□□□□□ -0.15
DSP-202ENST00000418664 CCP110O43303 1012 aa14.09□□□□□ -0.15
DSP-202ENST00000418664 LTV1Q96GA3 475 aaPredicted RBP14.09□□□□□ -0.15
DSP-202ENST00000418664 FEZ2Q9UHY8 353 aaPredicted RBP14.09□□□□□ -0.15
DSP-202ENST00000418664 ANAPC15P60006 121 aa14.08□□□□□ -0.15
DSP-202ENST00000418664 SEPT8Q92599 483 aa14.08□□□□□ -0.16
DSP-202ENST00000418664 APBB1IPQ7Z5R6 666 aaPredicted RBP14.07□□□□□ -0.16
DSP-202ENST00000418664 MPNDQ8N594 471 aa14.07□□□□□ -0.16
DSP-202ENST00000418664 SMC4Q9NTJ3 1288 aa14.07□□□□□ -0.16
DSP-202ENST00000418664 ZHX1Q9UKY1 873 aaPredicted RBP14.07□□□□□ -0.16
DSP-202ENST00000418664 WHAMMQ8TF30 809 aa14.07□□□□□ -0.16
DSP-202ENST00000418664 CHMP4CQ96CF2 233 aa14.07□□□□□ -0.16
DSP-202ENST00000418664 HOMER2Q9NSB8 354 aa14.07□□□□□ -0.16
DSP-202ENST00000418664 TRDNQ13061 729 aa14.06□□□□□ -0.16
DSP-202ENST00000418664 KRT18P05783 430 aaKnown RBP14.06□□□□□ -0.16
DSP-202ENST00000418664 CDK5RAP3Q96JB5 506 aa14.06□□□□□ -0.16
DSP-202ENST00000418664 PPP1R1BQ9UD71 204 aaPredicted RBP14.06□□□□□ -0.16
DSP-202ENST00000418664 MNAT1P51948 309 aa14.06□□□□□ -0.16
DSP-202ENST00000418664 FILIP1LQ4L180 1135 aa14.06□□□□□ -0.16
DSP-202ENST00000418664 CHMP5Q9NZZ3 219 aa14.05□□□□□ -0.16
DSP-202ENST00000418664 TMEM87AQ8NBN3 555 aa14.05□□□□□ -0.16
DSP-202ENST00000418664 ANKRD18BA2A2Z9 1011 aa14.05□□□□□ -0.16
DSP-202ENST00000418664 CCDC27Q2M243 656 aa14.05□□□□□ -0.16
DSP-202ENST00000418664 CGNL1Q0VF96 1302 aa14.05□□□□□ -0.16
DSP-202ENST00000418664 ZHX3Q9H4I2 956 aa14.04□□□□□ -0.16
DSP-202ENST00000418664 HDAC5Q9UQL6 1122 aa14.04□□□□□ -0.16
DSP-202ENST00000418664 SAFBQ15424 915 aaKnown RBP eCLIP14.04□□□□□ -0.16
DSP-202ENST00000418664 SDF4Q9BRK5 362 aa14.04□□□□□ -0.16
DSP-202ENST00000418664 RFC1P35251 1148 aaPredicted RBP14.04□□□□□ -0.16
DSP-202ENST00000418664 GOPCQ9HD26 462 aa14.04□□□□□ -0.16
DSP-202ENST00000418664 U2AF1L5P0DN76 240 aaPredicted RBP14.03□□□□□ -0.16
DSP-202ENST00000418664 U2AF1Q01081 240 aaKnown RBP eCLIP14.03□□□□□ -0.164e-6■■■■□ 19.8
DSP-202ENST00000418664 PDE1CQ14123 709 aaPredicted RBP14.03□□□□□ -0.16
DSP-202ENST00000418664 MPHOSPH10O00566 681 aaKnown RBP14.03□□□□□ -0.16
DSP-202ENST00000418664 DNAI2Q9GZS0 605 aa14.03□□□□□ -0.16
DSP-202ENST00000418664 PAXIP1Q6ZW49 1069 aaPredicted RBP14.03□□□□□ -0.16
DSP-202ENST00000418664 SYTL4Q96C24 671 aaPredicted RBP14.03□□□□□ -0.16
DSP-202ENST00000418664 ZNHIT6Q9NWK9 470 aaKnown RBP14.03□□□□□ -0.16
DSP-202ENST00000418664 CHMP4BP1P59074 171 aa14.03□□□□□ -0.16
DSP-202ENST00000418664 ANKRD45Q5TZF3 282 aa14.03□□□□□ -0.16
DSP-202ENST00000418664 POLR3GO15318 223 aaPredicted RBP14.03□□□□□ -0.16
DSP-202ENST00000418664 ZMAT2Q96NC0 199 aaKnown RBP14.02□□□□□ -0.16
DSP-202ENST00000418664 TXLNAP40222 546 aa14.02□□□□□ -0.16
DSP-202ENST00000418664 IL27Q8NEV9 243 aa14.02□□□□□ -0.16
DSP-202ENST00000418664 FEZ1Q99689 392 aa14.02□□□□□ -0.16
DSP-202ENST00000418664 PAIP2Q9BPZ3 127 aaKnown RBP14.02□□□□□ -0.17
DSP-202ENST00000418664 SMC3Q9UQE7 1217 aa14.02□□□□□ -0.17
DSP-202ENST00000418664 WDR78Q5VTH9 848 aa14.02□□□□□ -0.17
DSP-202ENST00000418664 RPUSD2Q8IZ73 545 aaKnown RBP14.02□□□□□ -0.17
DSP-202ENST00000418664 BRPF3Q9ULD4 1205 aa14.02□□□□□ -0.17
DSP-202ENST00000418664 DESP17661 470 aa14.01□□□□□ -0.17
DSP-202ENST00000418664 BRMS1Q9HCU9 246 aa14.01□□□□□ -0.17
DSP-202ENST00000418664 TDO2P48775 406 aa14.01□□□□□ -0.17
DSP-202ENST00000418664 EVA1CP58658 441 aa14.01□□□□□ -0.17
DSP-202ENST00000418664 MIPOL1Q8TD10 442 aa14.01□□□□□ -0.17
DSP-202ENST00000418664 RNF20Q5VTR2 975 aa14.01□□□□□ -0.17
DSP-202ENST00000418664 NAA25Q14CX7 972 aa14□□□□□ -0.17
DSP-202ENST00000418664 TANGO6Q9C0B7 1094 aa14□□□□□ -0.17
DSP-202ENST00000418664 CPSF2Q9P2I0 782 aaKnown RBP14□□□□□ -0.17
DSP-202ENST00000418664 ATP2C2O75185 946 aa14□□□□□ -0.17
DSP-202ENST00000418664 SETSIPP0DME0 302 aa14□□□□□ -0.17
DSP-202ENST00000418664 DNAAF4Q8WXU2 420 aa14□□□□□ -0.17
DSP-202ENST00000418664 NOL3O60936 208 aaKnown RBP14□□□□□ -0.17
DSP-202ENST00000418664 LRRFIP1Q32MZ4 808 aaKnown RBP14□□□□□ -0.17
DSP-202ENST00000418664 CALCOCO1Q9P1Z2 691 aa14□□□□□ -0.17
DSP-202ENST00000418664 CRACR2AQ9BSW2 395 aa13.99□□□□□ -0.17
DSP-202ENST00000418664 RRP9O43818 475 aaKnown RBP13.99□□□□□ -0.17
DSP-202ENST00000418664 SERPINC1P01008 464 aa13.99□□□□□ -0.17
DSP-202ENST00000418664 MRPS9P82933 396 aaKnown RBP13.99□□□□□ -0.17
DSP-202ENST00000418664 GIGYF2Q6Y7W6 1299 aaKnown RBP13.99□□□□□ -0.17
DSP-202ENST00000418664 HDGFL2Q7Z4V5 671 aaPredicted RBP13.99□□□□□ -0.17
DSP-202ENST00000418664 CEP120Q8N960 986 aa13.99□□□□□ -0.17
DSP-202ENST00000418664 GTPBP4Q9BZE4 634 aaKnown RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms