RNA–Protein interactions for RNA: ENST00000418386.2

LTA-213, Transcript of lymphotoxin alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LTA, Length 1,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-213ENST00000418386 ADGRB2O60241 1585 aa18.8■□□□□ 0.6
LTA-213ENST00000418386 NKTRP30414 1462 aaKnown RBP18.79■□□□□ 0.6
LTA-213ENST00000418386 CDCA8Q53HL2 280 aa18.78■□□□□ 0.6
LTA-213ENST00000418386 KCNA6P17658 529 aa18.77■□□□□ 0.6
LTA-213ENST00000418386 WAPLQ7Z5K2 1190 aa18.77■□□□□ 0.6
LTA-213ENST00000418386 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.77■□□□□ 0.6
LTA-213ENST00000418386 SAFB2Q14151 953 aaKnown RBP eCLIP18.75■□□□□ 0.59
LTA-213ENST00000418386 EVC2Q86UK5 1308 aa18.75■□□□□ 0.59
LTA-213ENST00000418386 MYOM1P52179 1685 aa18.75■□□□□ 0.59
LTA-213ENST00000418386 STRCP1A6NGW2 1772 aa18.75■□□□□ 0.59
LTA-213ENST00000418386 DIEXFQ68CQ4 756 aaKnown RBP18.74■□□□□ 0.59
LTA-213ENST00000418386 PUS7Q96PZ0 661 aaKnown RBP18.74■□□□□ 0.59
LTA-213ENST00000418386 MINK1Q8N4C8 1332 aaPredicted RBP18.73■□□□□ 0.59
LTA-213ENST00000418386 DMRT2Q9Y5R5 561 aa18.73■□□□□ 0.59
LTA-213ENST00000418386 NALCNQ8IZF0 1738 aa18.72■□□□□ 0.59
LTA-213ENST00000418386 DDX10Q13206 875 aaKnown RBP18.71■□□□□ 0.59
LTA-213ENST00000418386 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
LTA-213ENST00000418386 CDC42BPGQ6DT37 1551 aa18.69■□□□□ 0.58
LTA-213ENST00000418386 POLR3GLQ9BT43 218 aa18.69■□□□□ 0.58
LTA-213ENST00000418386 ADGRL3Q9HAR2 1447 aa18.68■□□□□ 0.58
LTA-213ENST00000418386 ATAD2Q6PL18 1390 aa18.68■□□□□ 0.58
LTA-213ENST00000418386 CENPBP07199 599 aaPredicted RBP18.68■□□□□ 0.58
LTA-213ENST00000418386 WASLO00401 505 aaPredicted RBP18.67■□□□□ 0.58
LTA-213ENST00000418386 ILDR1Q86SU0 546 aaPredicted RBP18.67■□□□□ 0.58
LTA-213ENST00000418386 NCOA3Q9Y6Q9 1424 aa18.67■□□□□ 0.58
LTA-213ENST00000418386 NINLQ9Y2I6 1382 aa18.67■□□□□ 0.58
LTA-213ENST00000418386 FMN2Q9NZ56 1722 aa18.66■□□□□ 0.58
LTA-213ENST00000418386 CDK19Q9BWU1 502 aa18.66■□□□□ 0.58
LTA-213ENST00000418386 TOPAZ1Q8N9V7 1692 aa18.65■□□□□ 0.58
LTA-213ENST00000418386 ATP7BP35670 1465 aa18.65■□□□□ 0.58
LTA-213ENST00000418386 SRPK2P78362 688 aaKnown RBP18.65■□□□□ 0.58
LTA-213ENST00000418386 CABP2Q9NPB3 220 aa18.64■□□□□ 0.57
LTA-213ENST00000418386 PROSER2Q86WR7 435 aaPredicted RBP18.63■□□□□ 0.57
LTA-213ENST00000418386 XIRP1Q702N8 1843 aaKnown RBP18.63■□□□□ 0.57
LTA-213ENST00000418386 USP32Q8NFA0 1604 aa18.62■□□□□ 0.57
LTA-213ENST00000418386 ITSN1Q15811 1721 aa18.62■□□□□ 0.57
LTA-213ENST00000418386 ZNF335Q9H4Z2 1342 aaPredicted RBP18.61■□□□□ 0.57
LTA-213ENST00000418386 ANKARQ7Z5J8 1434 aa18.61■□□□□ 0.57
LTA-213ENST00000418386 TMEM94Q12767 1356 aa18.61■□□□□ 0.57
LTA-213ENST00000418386 LRRC7Q96NW7 1537 aa18.6■□□□□ 0.57
LTA-213ENST00000418386 DCCP43146 1447 aa18.6■□□□□ 0.57
LTA-213ENST00000418386 PRR36Q9H6K5 1346 aa18.58■□□□□ 0.56
LTA-213ENST00000418386 ANKRD36BQ8N2N9 1353 aa18.58■□□□□ 0.56
LTA-213ENST00000418386 NUDT16Q96DE0 195 aaKnown RBP18.57■□□□□ 0.56
LTA-213ENST00000418386 PANK3Q9H999 370 aa18.57■□□□□ 0.56
LTA-213ENST00000418386 PPIP5K1Q6PFW1 1433 aa18.56■□□□□ 0.56
LTA-213ENST00000418386 CD163L1Q9NR16 1453 aa18.56■□□□□ 0.56
LTA-213ENST00000418386 RGPD8O14715 1765 aaPredicted RBP18.56■□□□□ 0.56
LTA-213ENST00000418386 TMC1Q8TDI8 760 aa18.56■□□□□ 0.56
LTA-213ENST00000418386 RBM33Q96EV2 1170 aaKnown RBP18.56■□□□□ 0.56
LTA-213ENST00000418386 SLC12A5Q9H2X9 1139 aa18.56■□□□□ 0.56
LTA-213ENST00000418386 CCDC61Q9Y6R9 512 aa18.56■□□□□ 0.56
LTA-213ENST00000418386 AKAP12Q02952 1782 aa18.55■□□□□ 0.56
LTA-213ENST00000418386 C14orf37Q86TY3 774 aa18.55■□□□□ 0.56
LTA-213ENST00000418386 C19orf44Q9H6X5 657 aa18.55■□□□□ 0.56
LTA-213ENST00000418386 LTBP4Q8N2S1 1624 aa18.55■□□□□ 0.56
LTA-213ENST00000418386 PER1O15534 1290 aaPredicted RBP18.54■□□□□ 0.56
LTA-213ENST00000418386 A0A1W2PP64 1363 aa18.53■□□□□ 0.56
LTA-213ENST00000418386 MON2Q7Z3U7 1717 aa18.53■□□□□ 0.56
LTA-213ENST00000418386 CABP1Q9NZU7 370 aa18.52■□□□□ 0.56
LTA-213ENST00000418386 MSH6P52701 1360 aa18.52■□□□□ 0.55
LTA-213ENST00000418386 CPSF1Q10570 1443 aaKnown RBP18.52■□□□□ 0.55
LTA-213ENST00000418386 TERF2IPQ9NYB0 399 aa18.51■□□□□ 0.55
LTA-213ENST00000418386 PLEKHG3A1L390 1219 aa18.5■□□□□ 0.55
LTA-213ENST00000418386 NPC1L1Q9UHC9 1359 aa18.5■□□□□ 0.55
LTA-213ENST00000418386 NSD3Q9BZ95 1437 aa18.5■□□□□ 0.55
LTA-213ENST00000418386 MST1RQ04912 1400 aa18.49■□□□□ 0.55
LTA-213ENST00000418386 NUTM2FA1L443 756 aa18.49■□□□□ 0.55
LTA-213ENST00000418386 HDGFL2Q7Z4V5 671 aaPredicted RBP18.49■□□□□ 0.55
LTA-213ENST00000418386 CARD14Q9BXL6 1004 aa18.49■□□□□ 0.55
LTA-213ENST00000418386 KNSTRNQ9Y448 316 aa18.49■□□□□ 0.55
LTA-213ENST00000418386 POLR3AO14802 1390 aaPredicted RBP18.48■□□□□ 0.55
LTA-213ENST00000418386 NRKQ7Z2Y5 1582 aa18.48■□□□□ 0.55
LTA-213ENST00000418386 KIF1AQ12756 1690 aa18.48■□□□□ 0.55
LTA-213ENST00000418386 C1orf167Q5SNV9 1468 aa18.48■□□□□ 0.55
LTA-213ENST00000418386 ANP32CO43423 234 aa18.48■□□□□ 0.55
LTA-213ENST00000418386 CADPS2Q86UW7 1296 aa18.48■□□□□ 0.55
LTA-213ENST00000418386 ATF3P18847 181 aa18.47■□□□□ 0.55
LTA-213ENST00000418386 AMER1Q5JTC6 1135 aaPredicted RBP18.47■□□□□ 0.55
LTA-213ENST00000418386 EDC4Q6P2E9 1401 aaKnown RBP18.46■□□□□ 0.55
LTA-213ENST00000418386 KTN1Q86UP2 1357 aaKnown RBP18.46■□□□□ 0.55
LTA-213ENST00000418386 PRKRIP1Q9H875 184 aaPredicted RBP18.45■□□□□ 0.54
LTA-213ENST00000418386 KIF20BQ96Q89 1820 aa18.45■□□□□ 0.54
LTA-213ENST00000418386 NSD2O96028 1365 aa18.44■□□□□ 0.54
LTA-213ENST00000418386 ACEP12821 1306 aa18.44■□□□□ 0.54
LTA-213ENST00000418386 MIER1Q8N108 512 aa18.44■□□□□ 0.54
LTA-213ENST00000418386 ZNF692Q9BU19 519 aaPredicted RBP18.44■□□□□ 0.54
LTA-213ENST00000418386 ANKRD26Q9UPS8 1709 aa18.44■□□□□ 0.54
LTA-213ENST00000418386 USP6P35125 1406 aa18.44■□□□□ 0.54
LTA-213ENST00000418386 PARD3Q8TEW0 1356 aa18.44■□□□□ 0.54
LTA-213ENST00000418386 CGNL1Q0VF96 1302 aa18.43■□□□□ 0.54
LTA-213ENST00000418386 PHF8Q9UPP1 1060 aa18.42■□□□□ 0.54
LTA-213ENST00000418386 SSH2Q76I76 1423 aa18.41■□□□□ 0.54
LTA-213ENST00000418386 BRD4O60885 1362 aaPredicted RBP18.41■□□□□ 0.54
LTA-213ENST00000418386 RALBP1Q15311 655 aa18.4■□□□□ 0.54
LTA-213ENST00000418386 PMFBP1Q8TBY8 1022 aa18.4■□□□□ 0.54
LTA-213ENST00000418386 NGDNQ8NEJ9 315 aaKnown RBP18.4■□□□□ 0.54
LTA-213ENST00000418386 ESCO1Q5FWF5 840 aa18.39■□□□□ 0.53
LTA-213ENST00000418386 CC2D1BQ5T0F9 858 aaKnown RBP18.38■□□□□ 0.53
LTA-213ENST00000418386 FBXO41Q8TF61 875 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms