RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 COG6Q9Y2V7 657 aa15.07■□□□□ 0
CSPG4P3Y-201ENST00000418188 NEURL4Q96JN8 1562 aa15.07■□□□□ 0
CSPG4P3Y-201ENST00000418188 SRPK2P78362 688 aaKnown RBP15.07■□□□□ 0
CSPG4P3Y-201ENST00000418188 STK26Q9P289 416 aa15.07■□□□□ 0
CSPG4P3Y-201ENST00000418188 NPATQ14207 1427 aa15.06■□□□□ 0
CSPG4P3Y-201ENST00000418188 RAPGEF3O95398 923 aa15.05■□□□□ 0
CSPG4P3Y-201ENST00000418188 PANK1Q8TE04 598 aa15.05■□□□□ 0
CSPG4P3Y-201ENST00000418188 CLUAP1Q96AJ1 413 aa15.05■□□□□ 0
CSPG4P3Y-201ENST00000418188 MYH16Q9H6N6 1097 aa15.05■□□□□ -0
CSPG4P3Y-201ENST00000418188 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
CSPG4P3Y-201ENST00000418188 NINLQ9Y2I6 1382 aa15.04■□□□□ -0
CSPG4P3Y-201ENST00000418188 U2SURPO15042 1029 aaKnown RBP15.04■□□□□ -0
CSPG4P3Y-201ENST00000418188 CABP2Q9NPB3 220 aa15.04■□□□□ -0
CSPG4P3Y-201ENST00000418188 STAG3Q9UJ98 1225 aa15.04■□□□□ -0
CSPG4P3Y-201ENST00000418188 POGZQ7Z3K3 1410 aa15.03■□□□□ -0
CSPG4P3Y-201ENST00000418188 MYOM1P52179 1685 aa15.03■□□□□ -0
CSPG4P3Y-201ENST00000418188 POGKQ9P215 609 aa15.03■□□□□ -0
CSPG4P3Y-201ENST00000418188 MROH1Q8NDA8 1641 aa15.03■□□□□ -0
CSPG4P3Y-201ENST00000418188 LMTK2Q8IWU2 1503 aa15.03■□□□□ -0
CSPG4P3Y-201ENST00000418188 SLC4A3P48751 1232 aa15.03■□□□□ -0
CSPG4P3Y-201ENST00000418188 WDR63Q8IWG1 891 aa15.03■□□□□ -0
CSPG4P3Y-201ENST00000418188 PPRC1Q5VV67 1664 aaKnown RBP15.03■□□□□ -0
CSPG4P3Y-201ENST00000418188 BCL2L13Q9BXK5 485 aa15.02□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 MAPK8IP3Q9UPT6 1336 aa15.02□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 PMFBP1Q8TBY8 1022 aa15.02□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 CFAP65Q6ZU64 1925 aaKnown RBP15.01□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 KIDINS220Q9ULH0 1771 aa15.01□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 FTSJ3Q8IY81 847 aaKnown RBP15.01□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 UPF2Q9HAU5 1272 aaKnown RBP15.01□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 ADGRB3O60242 1522 aa15.01□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 NRXN1Q9ULB1 1477 aa15.01□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 C8orf34Q49A92 452 aa15□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 MLH3Q9UHC1 1453 aa15□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 TERF2IPQ9NYB0 399 aa15□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 RARSP54136 660 aaKnown RBP15□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 AAMPQ13685 434 aa15□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 PUS7Q96PZ0 661 aaKnown RBP14.99□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 SLC52A1Q9NWF4 448 aa14.99□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 SETBP1Q9Y6X0 1596 aa14.99□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 IGHDP01880 384 aa14.99□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 IDI1Q13907 227 aa14.99□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 ANKRD36BQ8N2N9 1353 aa14.98□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 NSD2O96028 1365 aa14.98□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 RWDD1Q9H446 243 aaPredicted RBP14.97□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 GGNBP2Q9H3C7 697 aa14.97□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 MINK1Q8N4C8 1332 aaPredicted RBP14.97□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 CFAP74Q9C0B2 1584 aa14.96□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 MROH2AA6NES4 1674 aa14.96□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 CCDC27Q2M243 656 aa14.96□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 HDGFL2Q7Z4V5 671 aaPredicted RBP14.96□□□□□ -0.01
CSPG4P3Y-201ENST00000418188 BECN1Q14457 450 aa14.95□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 HECW2Q9P2P5 1572 aa14.95□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 ZKSCAN2Q63HK3 967 aa14.94□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 PNNQ9H307 717 aaKnown RBP14.94□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 SMC4Q9NTJ3 1288 aa14.94□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 ABCC3O15438 1527 aa14.94□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 PRAM1Q96QH2 718 aa14.93□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 MYO3AQ8NEV4 1616 aa14.93□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 NFKBIBQ15653 356 aa14.93□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 QRICH2Q9H0J4 1663 aa14.92□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 ATAD2Q6PL18 1390 aa14.92□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 DZIP1LQ8IYY4 767 aaKnown RBP14.92□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 IFT172Q9UG01 1749 aa14.91□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 ADGRB1O14514 1584 aa14.91□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 TSR2Q969E8 191 aaKnown RBP14.91□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 CT47B1P0C2W7 299 aaPredicted RBP14.9□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 NEO1Q92859 1461 aa14.9□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 DIAPH1O60610 1272 aaKnown RBP14.9□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 RLBP1P12271 317 aa14.9□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 PHF23Q9BUL5 403 aaPredicted RBP14.9□□□□□ -0.02
CSPG4P3Y-201ENST00000418188 ITPRIPQ8IWB1 547 aa14.89□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 A0A1W2PP64 1363 aa14.89□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 TMPOP42166 694 aaKnown RBP14.89□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 MVPQ14764 893 aaKnown RBP14.89□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 FRMPD1Q5SYB0 1578 aa14.89□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 RIPK4P57078 832 aa14.89□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 EXOSC9Q06265 439 aaKnown RBP14.89□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 PCDHB15Q9Y5E8 787 aa14.89□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 PDZRN3Q9UPQ7 1066 aa14.88□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 PPLO60437 1756 aa14.88□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 GLI2P10070 1586 aa14.88□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 TNNQ9UQP3 1299 aa14.88□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 IPO8O15397 1037 aaKnown RBP14.87□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 GSE1Q14687 1217 aa14.87□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 FYB1O15117 783 aa14.87□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.87□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 ABCC11Q96J66 1382 aa14.86□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 CDK19Q9BWU1 502 aa14.86□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 DDX19BQ9UMR2 479 aa14.86□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 CABP1Q9NZU7 370 aa14.86□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 FBXO31Q5XUX0 539 aaPredicted RBP14.85□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 ARHGAP31Q2M1Z3 1444 aa14.85□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 TULP4Q9NRJ4 1543 aa14.84□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 CAMSAP1Q5T5Y3 1602 aa14.84□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 IQSEC2Q5JU85 1478 aa14.84□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 CYB5RLQ6IPT4 315 aa14.83□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 ESF1Q9H501 851 aaKnown RBP14.83□□□□□ -0.03
CSPG4P3Y-201ENST00000418188 ATF7IPQ6VMQ6 1270 aa14.83□□□□□ -0.04
CSPG4P3Y-201ENST00000418188 SLKQ9H2G2 1235 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms