RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 LIG1P18858 919 aa12.38□□□□□ -0.43
SATB1-204ENST00000417717 REC8O95072 547 aa12.37□□□□□ -0.43
SATB1-204ENST00000417717 PSMD1Q99460 953 aa12.37□□□□□ -0.43
SATB1-204ENST00000417717 VGLL3A8MV65 326 aa12.37□□□□□ -0.43
SATB1-204ENST00000417717 MPHOSPH10O00566 681 aaKnown RBP12.37□□□□□ -0.43
SATB1-204ENST00000417717 HSPA5P11021 654 aaKnown RBP12.37□□□□□ -0.43
SATB1-204ENST00000417717 MRVI1Q9Y6F6 885 aa12.37□□□□□ -0.43
SATB1-204ENST00000417717 BMS1Q14692 1282 aaKnown RBP12.37□□□□□ -0.43
SATB1-204ENST00000417717 KCNH8Q96L42 1107 aa12.37□□□□□ -0.43
SATB1-204ENST00000417717 CIZ1Q9ULV3 898 aaPredicted RBP12.37□□□□□ -0.43
SATB1-204ENST00000417717 GOLGA6L10A0A0M3HER8 536 aa12.37□□□□□ -0.43
SATB1-204ENST00000417717 GORABQ5T7V8 394 aa12.36□□□□□ -0.43
SATB1-204ENST00000417717 NOL8Q76FK4 1167 aaKnown RBP12.36□□□□□ -0.43
SATB1-204ENST00000417717 FILIP1Q7Z7B0 1213 aa12.36□□□□□ -0.43
SATB1-204ENST00000417717 CENPJQ9HC77 1338 aaPredicted RBP12.36□□□□□ -0.43
SATB1-204ENST00000417717 CUL7Q14999 1698 aa12.36□□□□□ -0.43
SATB1-204ENST00000417717 BICD2Q8TD16 824 aa12.36□□□□□ -0.43
SATB1-204ENST00000417717 RABEP1Q15276 862 aa12.35□□□□□ -0.43
SATB1-204ENST00000417717 CRBNQ96SW2 442 aa12.35□□□□□ -0.43
SATB1-204ENST00000417717 POGKQ9P215 609 aa12.35□□□□□ -0.43
SATB1-204ENST00000417717 TTC31Q49AM3 519 aaPredicted RBP12.35□□□□□ -0.43
SATB1-204ENST00000417717 SLC26A8Q96RN1 970 aa12.35□□□□□ -0.43
SATB1-204ENST00000417717 CCDC146Q8IYE0 955 aa12.35□□□□□ -0.43
SATB1-204ENST00000417717 CCDC102AQ96A19 550 aa12.35□□□□□ -0.43
SATB1-204ENST00000417717 MYCBPQ99417 103 aaPredicted RBP12.35□□□□□ -0.43
SATB1-204ENST00000417717 H3BQV1 296 aa12.34□□□□□ -0.43
SATB1-204ENST00000417717 FOXD4L6Q3SYB3 417 aaPredicted RBP12.34□□□□□ -0.43
SATB1-204ENST00000417717 IFFO2Q5TF58 517 aa12.34□□□□□ -0.43
SATB1-204ENST00000417717 FOXD4L3Q6VB84 417 aaPredicted RBP12.34□□□□□ -0.43
SATB1-204ENST00000417717 CREBRFQ8IUR6 639 aa12.34□□□□□ -0.43
SATB1-204ENST00000417717 LUZP1Q86V48 1076 aa12.34□□□□□ -0.43
SATB1-204ENST00000417717 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
SATB1-204ENST00000417717 XPCQ01831 940 aaPredicted RBP12.34□□□□□ -0.43
SATB1-204ENST00000417717 NLRP13Q86W25 1043 aa12.34□□□□□ -0.43
SATB1-204ENST00000417717 SUDS3Q9H7L9 328 aaPredicted RBP12.34□□□□□ -0.43
SATB1-204ENST00000417717 TOMM22Q9NS69 142 aa12.34□□□□□ -0.43
SATB1-204ENST00000417717 GOLIM4O00461 696 aa12.33□□□□□ -0.43
SATB1-204ENST00000417717 TSPY4P0CV99 314 aa12.33□□□□□ -0.43
SATB1-204ENST00000417717 TSPY10P0CW01 314 aa12.33□□□□□ -0.43
SATB1-204ENST00000417717 GBP2P32456 591 aaPredicted RBP12.33□□□□□ -0.43
SATB1-204ENST00000417717 LRRCC1Q9C099 1032 aa12.33□□□□□ -0.43
SATB1-204ENST00000417717 KANK4Q5T7N3 995 aaPredicted RBP12.33□□□□□ -0.44
SATB1-204ENST00000417717 FEZ1Q99689 392 aa12.33□□□□□ -0.44
SATB1-204ENST00000417717 FHOD3Q2V2M9 1422 aa12.33□□□□□ -0.44
SATB1-204ENST00000417717 SPDYE4A6NLX3 237 aa12.33□□□□□ -0.44
SATB1-204ENST00000417717 A0A1B0GUA9 196 aa12.32□□□□□ -0.44
SATB1-204ENST00000417717 NPM1P06748 294 aaKnown RBP eCLIP12.32□□□□□ -0.44
SATB1-204ENST00000417717 ENOX2Q16206 610 aaKnown RBP12.32□□□□□ -0.44
SATB1-204ENST00000417717 HOOK1Q9UJC3 728 aaKnown RBP12.32□□□□□ -0.44
SATB1-204ENST00000417717 CASKIN1Q8WXD9 1431 aa12.32□□□□□ -0.44
SATB1-204ENST00000417717 CCDC73Q6ZRK6 1079 aa12.32□□□□□ -0.44
SATB1-204ENST00000417717 CHGAP10645 457 aaKnown RBP12.32□□□□□ -0.44
SATB1-204ENST00000417717 A0A1B0GUL7 405 aa12.31□□□□□ -0.44
SATB1-204ENST00000417717 APBB1O00213 710 aa12.31□□□□□ -0.44
SATB1-204ENST00000417717 EZRP15311 586 aaKnown RBP12.31□□□□□ -0.44
SATB1-204ENST00000417717 SETD5Q9C0A6 1442 aa12.31□□□□□ -0.44
SATB1-204ENST00000417717 ARID3CA6NKF2 412 aa12.3□□□□□ -0.44
SATB1-204ENST00000417717 MAP3K1Q13233 1512 aa12.3□□□□□ -0.44
SATB1-204ENST00000417717 KIF18AQ8NI77 898 aa12.3□□□□□ -0.44
SATB1-204ENST00000417717 CLASRPQ8N2M8 674 aaKnown RBP12.3□□□□□ -0.44
SATB1-204ENST00000417717 SWAP70Q9UH65 585 aa12.3□□□□□ -0.44
SATB1-204ENST00000417717 FYCO1Q9BQS8 1478 aa12.3□□□□□ -0.44
SATB1-204ENST00000417717 POLR3GO15318 223 aaPredicted RBP12.3□□□□□ -0.44
SATB1-204ENST00000417717 TMF1P82094 1093 aa12.3□□□□□ -0.44
SATB1-204ENST00000417717 GBP6Q6ZN66 633 aa12.3□□□□□ -0.44
SATB1-204ENST00000417717 CCDC18Q5T9S5 1454 aa12.3□□□□□ -0.44
SATB1-204ENST00000417717 PRPF40AO75400 957 aaKnown RBP12.29□□□□□ -0.44
SATB1-204ENST00000417717 CCDC192P0DO97 292 aa12.29□□□□□ -0.44
SATB1-204ENST00000417717 WDR66Q8TBY9 1149 aa12.29□□□□□ -0.44
SATB1-204ENST00000417717 ARID4AP29374 1257 aaPredicted RBP12.29□□□□□ -0.44
SATB1-204ENST00000417717 TERF1P54274 439 aa12.29□□□□□ -0.44
SATB1-204ENST00000417717 SPC24Q8NBT2 197 aa12.29□□□□□ -0.44
SATB1-204ENST00000417717 CRACR2AQ9BSW2 395 aa12.29□□□□□ -0.44
SATB1-204ENST00000417717 ARAP1Q96P48 1450 aa12.29□□□□□ -0.44
SATB1-204ENST00000417717 TMX4Q9H1E5 349 aaPredicted RBP12.28□□□□□ -0.44
SATB1-204ENST00000417717 CFDP1Q9UEE9 299 aaPredicted RBP12.28□□□□□ -0.44
SATB1-204ENST00000417717 OFD1O75665 1012 aa12.28□□□□□ -0.44
SATB1-204ENST00000417717 PPP1R15AO75807 674 aaPredicted RBP12.28□□□□□ -0.44
SATB1-204ENST00000417717 SMC4Q9NTJ3 1288 aa12.28□□□□□ -0.44
SATB1-204ENST00000417717 LMAN1P49257 510 aa12.28□□□□□ -0.44
SATB1-204ENST00000417717 PTPN14Q15678 1187 aa12.28□□□□□ -0.44
SATB1-204ENST00000417717 URB2Q14146 1524 aaKnown RBP12.27□□□□□ -0.44
SATB1-204ENST00000417717 CLSTN1O94985 981 aa12.27□□□□□ -0.44
SATB1-204ENST00000417717 IBSPP21815 317 aaPredicted RBP12.27□□□□□ -0.44
SATB1-204ENST00000417717 GABPB1Q06547 395 aaPredicted RBP12.27□□□□□ -0.44
SATB1-204ENST00000417717 DHX37Q8IY37 1157 aaKnown RBP12.27□□□□□ -0.44
SATB1-204ENST00000417717 CWC22Q9HCG8 908 aaKnown RBP12.27□□□□□ -0.44
SATB1-204ENST00000417717 RRP7BPQ9NSQ0 103 aa12.27□□□□□ -0.44
SATB1-204ENST00000417717 CHMP3Q9Y3E7 222 aa12.27□□□□□ -0.44
SATB1-204ENST00000417717 AQRO60306 1485 aaKnown RBP eCLIP12.27□□□□□ -0.44
SATB1-204ENST00000417717 RASSF8Q8NHQ8 419 aa12.27□□□□□ -0.45
SATB1-204ENST00000417717 GPATCH3Q96I76 525 aa12.27□□□□□ -0.45
SATB1-204ENST00000417717 SRPK2P78362 688 aaKnown RBP12.27□□□□□ -0.45
SATB1-204ENST00000417717 MAP9Q49MG5 647 aa12.27□□□□□ -0.45
SATB1-204ENST00000417717 LRCH2Q5VUJ6 765 aa12.27□□□□□ -0.45
SATB1-204ENST00000417717 SPATA24Q86W54 205 aa12.27□□□□□ -0.45
SATB1-204ENST00000417717 CLUAP1Q96AJ1 413 aa12.27□□□□□ -0.45
SATB1-204ENST00000417717 OGFRQ9NZT2 677 aa12.26□□□□□ -0.45
SATB1-204ENST00000417717 SMC3Q9UQE7 1217 aa12.26□□□□□ -0.45
SATB1-204ENST00000417717 ROCK2O75116 1388 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms