RNA–Protein interactions for RNA: ENST00000417658.5

PRPF18-203, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-203ENST00000417658 NPHP3Q7Z494 1330 aa24.63■■□□□ 1.53
PRPF18-203ENST00000417658 ESCO1Q5FWF5 840 aa24.62■■□□□ 1.53
PRPF18-203ENST00000417658 COL22A1Q8NFW1 1626 aaPredicted RBP24.61■■□□□ 1.53
PRPF18-203ENST00000417658 ATRNO75882 1429 aa24.6■■□□□ 1.53
PRPF18-203ENST00000417658 PPLO60437 1756 aa24.59■■□□□ 1.53
PRPF18-203ENST00000417658 MYOM2P54296 1465 aa24.58■■□□□ 1.52
PRPF18-203ENST00000417658 FOXO3O43524 673 aa24.57■■□□□ 1.52
PRPF18-203ENST00000417658 FOXD1Q16676 465 aa24.57■■□□□ 1.52
PRPF18-203ENST00000417658 CDC42BPGQ6DT37 1551 aa24.57■■□□□ 1.52
PRPF18-203ENST00000417658 LRPPRCP42704 1394 aaKnown RBP24.56■■□□□ 1.52
PRPF18-203ENST00000417658 CCDC125Q86Z20 511 aa24.55■■□□□ 1.52
PRPF18-203ENST00000417658 PXDNQ92626 1479 aa24.55■■□□□ 1.52
PRPF18-203ENST00000417658 BCL9LQ86UU0 1499 aa24.54■■□□□ 1.52
PRPF18-203ENST00000417658 ADGRF5Q8IZF2 1346 aa24.53■■□□□ 1.52
PRPF18-203ENST00000417658 TECPR2O15040 1411 aa24.52■■□□□ 1.52
PRPF18-203ENST00000417658 WAPLQ7Z5K2 1190 aa24.51■■□□□ 1.51
PRPF18-203ENST00000417658 GJD4Q96KN9 370 aaPredicted RBP24.51■■□□□ 1.51
PRPF18-203ENST00000417658 ABCC11Q96J66 1382 aa24.51■■□□□ 1.51
PRPF18-203ENST00000417658 ANKRD30BQ9BXX2 1392 aa24.51■■□□□ 1.51
PRPF18-203ENST00000417658 SRCAPQ6ZRS2 3230 aa24.51■■□□□ 1.51
PRPF18-203ENST00000417658 XPCQ01831 940 aaPredicted RBP24.5■■□□□ 1.51
PRPF18-203ENST00000417658 STK26Q9P289 416 aa24.5■■□□□ 1.51
PRPF18-203ENST00000417658 ZRANB1Q9UGI0 708 aa24.5■■□□□ 1.51
PRPF18-203ENST00000417658 CCDC144AA2RUR9 1427 aa24.49■■□□□ 1.51
PRPF18-203ENST00000417658 RGL3Q3MIN7 710 aa24.48■■□□□ 1.51
PRPF18-203ENST00000417658 MARF1Q9Y4F3 1742 aaKnown RBP24.47■■□□□ 1.51
PRPF18-203ENST00000417658 SPATA31E1Q6ZUB1 1445 aa24.47■■□□□ 1.51
PRPF18-203ENST00000417658 NUTM2FA1L443 756 aa24.46■■□□□ 1.51
PRPF18-203ENST00000417658 SIRT1Q96EB6 747 aa24.45■■□□□ 1.5
PRPF18-203ENST00000417658 SPATA31A3Q5VYP0 1347 aa24.44■■□□□ 1.5
PRPF18-203ENST00000417658 TMEM132EQ6IEE7 984 aa24.44■■□□□ 1.5
PRPF18-203ENST00000417658 UNC5CLQ8IV45 518 aa24.44■■□□□ 1.5
PRPF18-203ENST00000417658 EP400Q96L91 3159 aa24.44■■□□□ 1.5
PRPF18-203ENST00000417658 PLEKHH1Q9ULM0 1364 aa24.42■■□□□ 1.5
PRPF18-203ENST00000417658 MPHOSPH9Q99550 1183 aa24.41■■□□□ 1.5
PRPF18-203ENST00000417658 SLIT2O94813 1529 aa24.4■■□□□ 1.5
PRPF18-203ENST00000417658 KRT28Q7Z3Y7 464 aa24.4■■□□□ 1.5
PRPF18-203ENST00000417658 PIK3C2GO75747 1445 aa24.4■■□□□ 1.5
PRPF18-203ENST00000417658 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.4■■□□□ 1.5
PRPF18-203ENST00000417658 KNDC1Q76NI1 1749 aa24.39■■□□□ 1.5
PRPF18-203ENST00000417658 YTHDC2Q9H6S0 1430 aaKnown RBP24.39■■□□□ 1.5
PRPF18-203ENST00000417658 IFT172Q9UG01 1749 aa24.38■■□□□ 1.49
PRPF18-203ENST00000417658 FMN2Q9NZ56 1722 aa24.38■■□□□ 1.49
PRPF18-203ENST00000417658 KIF1AQ12756 1690 aa24.37■■□□□ 1.49
PRPF18-203ENST00000417658 PSME1Q06323 249 aa24.37■■□□□ 1.49
PRPF18-203ENST00000417658 RALGAPBQ86X10 1494 aa24.37■■□□□ 1.49
PRPF18-203ENST00000417658 C14orf93Q9H972 538 aaKnown RBP24.36■■□□□ 1.49
PRPF18-203ENST00000417658 PHF8Q9UPP1 1060 aa24.35■■□□□ 1.49
PRPF18-203ENST00000417658 BLMP54132 1417 aaPredicted RBP24.35■■□□□ 1.49
PRPF18-203ENST00000417658 GLI3P10071 1580 aa24.33■■□□□ 1.49
PRPF18-203ENST00000417658 ACIN1Q9UKV3 1341 aaKnown RBP24.33■■□□□ 1.48
PRPF18-203ENST00000417658 ONECUT3O60422 494 aaPredicted RBP24.32■■□□□ 1.48
PRPF18-203ENST00000417658 HAP1P54257 671 aaPredicted RBP24.32■■□□□ 1.48
PRPF18-203ENST00000417658 VPS72Q15906 364 aa24.32■■□□□ 1.48
PRPF18-203ENST00000417658 USP32Q8NFA0 1604 aa24.32■■□□□ 1.48
PRPF18-203ENST00000417658 DHX57Q6P158 1386 aaKnown RBP24.31■■□□□ 1.48
PRPF18-203ENST00000417658 SBNO1A3KN83 1393 aa24.3■■□□□ 1.48
PRPF18-203ENST00000417658 TNS3Q68CZ2 1445 aa24.3■■□□□ 1.48
PRPF18-203ENST00000417658 SEPT12Q8IYM1 358 aa24.3■■□□□ 1.48
PRPF18-203ENST00000417658 CFAP70Q5T0N1 1121 aa24.28■■□□□ 1.48
PRPF18-203ENST00000417658 CABLES1Q8TDN4 633 aa24.28■■□□□ 1.48
PRPF18-203ENST00000417658 NRXN1Q9ULB1 1477 aa24.27■■□□□ 1.48
PRPF18-203ENST00000417658 SF3B2Q13435 895 aaKnown RBP24.27■■□□□ 1.48
PRPF18-203ENST00000417658 ARHGEF10O15013 1369 aa24.27■■□□□ 1.48
PRPF18-203ENST00000417658 RGPD8O14715 1765 aaPredicted RBP24.26■■□□□ 1.47
PRPF18-203ENST00000417658 PRAM1Q96QH2 718 aa24.25■■□□□ 1.47
PRPF18-203ENST00000417658 BRWD3Q6RI45 1802 aa24.24■■□□□ 1.47
PRPF18-203ENST00000417658 LMOD2Q6P5Q4 547 aa24.24■■□□□ 1.47
PRPF18-203ENST00000417658 NWD2Q9ULI1 1742 aa24.24■■□□□ 1.47
PRPF18-203ENST00000417658 FAM83GA6ND36 823 aa24.23■■□□□ 1.47
PRPF18-203ENST00000417658 KRT27Q7Z3Y8 459 aa24.23■■□□□ 1.47
PRPF18-203ENST00000417658 DEFB132Q7Z7B7 95 aa24.23■■□□□ 1.47
PRPF18-203ENST00000417658 CCDC9Q9Y3X0 531 aaKnown RBP24.23■■□□□ 1.47
PRPF18-203ENST00000417658 ANKARQ7Z5J8 1434 aa24.21■■□□□ 1.47
PRPF18-203ENST00000417658 SAFB2Q14151 953 aaKnown RBP eCLIP24.21■■□□□ 1.47
PRPF18-203ENST00000417658 POGKQ9P215 609 aa24.21■■□□□ 1.47
PRPF18-203ENST00000417658 DLC1Q96QB1 1528 aa24.19■■□□□ 1.46
PRPF18-203ENST00000417658 PLCH1Q4KWH8 1693 aa24.18■■□□□ 1.46
PRPF18-203ENST00000417658 PLEKHG5O94827 1062 aa24.18■■□□□ 1.46
PRPF18-203ENST00000417658 PMFBP1Q8TBY8 1022 aa24.18■■□□□ 1.46
PRPF18-203ENST00000417658 ABCA3Q99758 1704 aa24.15■■□□□ 1.46
PRPF18-203ENST00000417658 GPRASP1Q5JY77 1395 aa24.14■■□□□ 1.45
PRPF18-203ENST00000417658 ADGRB2O60241 1585 aa24.13■■□□□ 1.45
PRPF18-203ENST00000417658 BTG4Q9NY30 223 aa24.13■■□□□ 1.45
PRPF18-203ENST00000417658 EIF3AQ14152 1382 aaKnown RBP24.13■■□□□ 1.45
PRPF18-203ENST00000417658 BAG6P46379 1132 aa24.12■■□□□ 1.45
PRPF18-203ENST00000417658 FAM98CQ17RN3 349 aaKnown RBP24.11■■□□□ 1.45
PRPF18-203ENST00000417658 A0A0G2JS52 829 aa24.1■■□□□ 1.45
PRPF18-203ENST00000417658 MYT1Q01538 1121 aa24.1■■□□□ 1.45
PRPF18-203ENST00000417658 TRAK1Q9UPV9 953 aa24.1■■□□□ 1.45
PRPF18-203ENST00000417658 ADGRB1O14514 1584 aa24.09■■□□□ 1.45
PRPF18-203ENST00000417658 HIRIP3Q9BW71 556 aaPredicted RBP24.09■■□□□ 1.45
PRPF18-203ENST00000417658 TRPM3Q9HCF6 1732 aaPredicted RBP24.09■■□□□ 1.45
PRPF18-203ENST00000417658 WASLO00401 505 aaPredicted RBP24.08■■□□□ 1.45
PRPF18-203ENST00000417658 STAC3Q96MF2 364 aa24.08■■□□□ 1.45
PRPF18-203ENST00000417658 PRR36Q9H6K5 1346 aa24.08■■□□□ 1.44
PRPF18-203ENST00000417658 MINK1Q8N4C8 1332 aaPredicted RBP24.07■■□□□ 1.44
PRPF18-203ENST00000417658 NRAPQ86VF7 1730 aa24.07■■□□□ 1.44
PRPF18-203ENST00000417658 COL14A1Q05707 1796 aaKnown RBP24.06■■□□□ 1.44
PRPF18-203ENST00000417658 ALS2Q96Q42 1657 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms