RNA–Protein interactions for RNA: ENST00000416754.1

RUNX1-206, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-206ENST00000416754 FAM50AQ14320 339 aaKnown RBP13.76□□□□□ -0.21
RUNX1-206ENST00000416754 FNBP4Q8N3X1 1017 aaPredicted RBP13.76□□□□□ -0.21
RUNX1-206ENST00000416754 TRPM2O94759 1503 aa13.75□□□□□ -0.21
RUNX1-206ENST00000416754 POLA2Q14181 598 aa13.75□□□□□ -0.21
RUNX1-206ENST00000416754 ATRNO75882 1429 aa13.74□□□□□ -0.21
RUNX1-206ENST00000416754 DEFB132Q7Z7B7 95 aa13.74□□□□□ -0.21
RUNX1-206ENST00000416754 EP400Q96L91 3159 aa13.74□□□□□ -0.21
RUNX1-206ENST00000416754 UNC13BO14795 1591 aa13.73□□□□□ -0.21
RUNX1-206ENST00000416754 ADGRL2O95490 1459 aa13.73□□□□□ -0.21
RUNX1-206ENST00000416754 C1orf167Q5SNV9 1468 aa13.73□□□□□ -0.21
RUNX1-206ENST00000416754 SOS2Q07890 1332 aaPredicted RBP13.72□□□□□ -0.21
RUNX1-206ENST00000416754 ADGRL3Q9HAR2 1447 aa13.72□□□□□ -0.21
RUNX1-206ENST00000416754 XRN1Q8IZH2 1706 aaKnown RBP13.71□□□□□ -0.21
RUNX1-206ENST00000416754 ZNF326Q5BKZ1 582 aaKnown RBP13.7□□□□□ -0.22
RUNX1-206ENST00000416754 CCDC125Q86Z20 511 aa13.7□□□□□ -0.22
RUNX1-206ENST00000416754 NRXN3Q9Y4C0 1643 aa13.7□□□□□ -0.22
RUNX1-206ENST00000416754 BCL9LQ86UU0 1499 aa13.69□□□□□ -0.22
RUNX1-206ENST00000416754 XPCQ01831 940 aaPredicted RBP13.69□□□□□ -0.22
RUNX1-206ENST00000416754 GJD4Q96KN9 370 aaPredicted RBP13.69□□□□□ -0.22
RUNX1-206ENST00000416754 E9PCH4 1651 aa13.69□□□□□ -0.22
RUNX1-206ENST00000416754 PTCH1Q13635 1447 aa13.67□□□□□ -0.22
RUNX1-206ENST00000416754 PSDA5PKW4 1024 aaPredicted RBP13.66□□□□□ -0.22
RUNX1-206ENST00000416754 NUP155O75694 1391 aa13.66□□□□□ -0.22
RUNX1-206ENST00000416754 NALCNQ8IZF0 1738 aa13.65□□□□□ -0.22
RUNX1-206ENST00000416754 ROBO2Q9HCK4 1378 aa13.65□□□□□ -0.22
RUNX1-206ENST00000416754 MYOM2P54296 1465 aa13.63□□□□□ -0.23
RUNX1-206ENST00000416754 FOXO3O43524 673 aa13.63□□□□□ -0.23
RUNX1-206ENST00000416754 BLMP54132 1417 aaPredicted RBP13.63□□□□□ -0.23
RUNX1-206ENST00000416754 ESCO1Q5FWF5 840 aa13.62□□□□□ -0.23
RUNX1-206ENST00000416754 NUTM2FA1L443 756 aa13.61□□□□□ -0.23
RUNX1-206ENST00000416754 UNC5CLQ8IV45 518 aa13.61□□□□□ -0.23
RUNX1-206ENST00000416754 SEPT12Q8IYM1 358 aa13.61□□□□□ -0.23
RUNX1-206ENST00000416754 RALGAPBQ86X10 1494 aa13.61□□□□□ -0.23
RUNX1-206ENST00000416754 LAMC1P11047 1609 aa13.61□□□□□ -0.23
RUNX1-206ENST00000416754 PLEKHG5O94827 1062 aa13.6□□□□□ -0.23
RUNX1-206ENST00000416754 HRCP23327 699 aa13.59□□□□□ -0.23
RUNX1-206ENST00000416754 ITGAEP38570 1179 aa13.59□□□□□ -0.23
RUNX1-206ENST00000416754 GLI3P10071 1580 aa13.58□□□□□ -0.23
RUNX1-206ENST00000416754 IQGAP3Q86VI3 1631 aa13.58□□□□□ -0.24
RUNX1-206ENST00000416754 SF3B2Q13435 895 aaKnown RBP13.58□□□□□ -0.24
RUNX1-206ENST00000416754 NPHP3Q7Z494 1330 aa13.58□□□□□ -0.24
RUNX1-206ENST00000416754 COL22A1Q8NFW1 1626 aaPredicted RBP13.57□□□□□ -0.24
RUNX1-206ENST00000416754 PXDNQ92626 1479 aa13.57□□□□□ -0.24
RUNX1-206ENST00000416754 NEXMIFQ5QGS0 1516 aa13.56□□□□□ -0.24
RUNX1-206ENST00000416754 CABLES1Q8TDN4 633 aa13.56□□□□□ -0.24
RUNX1-206ENST00000416754 SLIT2O94813 1529 aa13.54□□□□□ -0.24
RUNX1-206ENST00000416754 KRT27Q7Z3Y8 459 aa13.54□□□□□ -0.24
RUNX1-206ENST00000416754 WAPLQ7Z5K2 1190 aa13.54□□□□□ -0.24
RUNX1-206ENST00000416754 BRWD3Q6RI45 1802 aa13.54□□□□□ -0.24
RUNX1-206ENST00000416754 EN1Q05925 392 aaPredicted RBP13.53□□□□□ -0.24
RUNX1-206ENST00000416754 R3HDM1Q15032 1099 aaKnown RBP13.53□□□□□ -0.24
RUNX1-206ENST00000416754 FAM182BQ5T319 152 aa13.53□□□□□ -0.24
RUNX1-206ENST00000416754 CCDC9Q9Y3X0 531 aaKnown RBP13.53□□□□□ -0.24
RUNX1-206ENST00000416754 ROCK1Q13464 1354 aa13.53□□□□□ -0.24
RUNX1-206ENST00000416754 LRP5O75197 1615 aa13.53□□□□□ -0.24
RUNX1-206ENST00000416754 ONECUT3O60422 494 aaPredicted RBP13.52□□□□□ -0.25
RUNX1-206ENST00000416754 VPS72Q15906 364 aa13.52□□□□□ -0.25
RUNX1-206ENST00000416754 STK26Q9P289 416 aa13.52□□□□□ -0.25
RUNX1-206ENST00000416754 SPATA31A3Q5VYP0 1347 aa13.52□□□□□ -0.25
RUNX1-206ENST00000416754 CLTCL1P53675 1640 aa13.51□□□□□ -0.25
RUNX1-206ENST00000416754 VGFO15240 615 aaPredicted RBP13.51□□□□□ -0.25
RUNX1-206ENST00000416754 KRT28Q7Z3Y7 464 aa13.51□□□□□ -0.25
RUNX1-206ENST00000416754 BAG6P46379 1132 aa13.5□□□□□ -0.25
RUNX1-206ENST00000416754 MARF1Q9Y4F3 1742 aaKnown RBP13.5□□□□□ -0.25
RUNX1-206ENST00000416754 HFM1A2PYH4 1435 aa13.49□□□□□ -0.25
RUNX1-206ENST00000416754 NAIPQ13075 1403 aa13.49□□□□□ -0.25
RUNX1-206ENST00000416754 A0A0G2JS52 829 aa13.49□□□□□ -0.25
RUNX1-206ENST00000416754 MYT1Q01538 1121 aa13.49□□□□□ -0.25
RUNX1-206ENST00000416754 POTEHQ6S545 545 aa13.49□□□□□ -0.25
RUNX1-206ENST00000416754 SPHKAPQ2M3C7 1700 aa13.49□□□□□ -0.25
RUNX1-206ENST00000416754 PLEKHH1Q9ULM0 1364 aa13.48□□□□□ -0.25
RUNX1-206ENST00000416754 FAM83GA6ND36 823 aa13.48□□□□□ -0.25
RUNX1-206ENST00000416754 HAP1P54257 671 aaPredicted RBP13.48□□□□□ -0.25
RUNX1-206ENST00000416754 FAM98CQ17RN3 349 aaKnown RBP13.48□□□□□ -0.25
RUNX1-206ENST00000416754 PPARGC1BQ86YN6 1023 aaKnown RBP13.47□□□□□ -0.25
RUNX1-206ENST00000416754 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.47□□□□□ -0.25
RUNX1-206ENST00000416754 TMEM132EQ6IEE7 984 aa13.46□□□□□ -0.25
RUNX1-206ENST00000416754 LMOD2Q6P5Q4 547 aa13.46□□□□□ -0.25
RUNX1-206ENST00000416754 PRAG1Q86YV5 1406 aa13.46□□□□□ -0.26
RUNX1-206ENST00000416754 LRPPRCP42704 1394 aaKnown RBP13.45□□□□□ -0.26
RUNX1-206ENST00000416754 ADGRF5Q8IZF2 1346 aa13.45□□□□□ -0.26
RUNX1-206ENST00000416754 YY1P25490 414 aa13.45□□□□□ -0.26
RUNX1-206ENST00000416754 EZH2Q15910 746 aaKnown RBP13.45□□□□□ -0.26
RUNX1-206ENST00000416754 CDC42BPGQ6DT37 1551 aa13.44□□□□□ -0.26
RUNX1-206ENST00000416754 USP32Q8NFA0 1604 aa13.42□□□□□ -0.26
RUNX1-206ENST00000416754 RPGRIP1LQ68CZ1 1315 aa13.42□□□□□ -0.26
RUNX1-206ENST00000416754 BTG4Q9NY30 223 aa13.41□□□□□ -0.26
RUNX1-206ENST00000416754 PHF8Q9UPP1 1060 aa13.41□□□□□ -0.26
RUNX1-206ENST00000416754 CCDC144AA2RUR9 1427 aa13.4□□□□□ -0.26
RUNX1-206ENST00000416754 RGL3Q3MIN7 710 aa13.4□□□□□ -0.26
RUNX1-206ENST00000416754 CAMKK2Q96RR4 588 aa13.4□□□□□ -0.26
RUNX1-206ENST00000416754 TNS3Q68CZ2 1445 aa13.39□□□□□ -0.27
RUNX1-206ENST00000416754 TRIM37O94972 964 aa13.39□□□□□ -0.27
RUNX1-206ENST00000416754 PSME1Q06323 249 aa13.39□□□□□ -0.27
RUNX1-206ENST00000416754 KIF1BO60333 1816 aa13.39□□□□□ -0.27
RUNX1-206ENST00000416754 PMFBP1Q8TBY8 1022 aa13.38□□□□□ -0.27
RUNX1-206ENST00000416754 PLCH1Q4KWH8 1693 aa13.37□□□□□ -0.27
RUNX1-206ENST00000416754 ABCC11Q96J66 1382 aa13.37□□□□□ -0.27
RUNX1-206ENST00000416754 SAFB2Q14151 953 aaKnown RBP eCLIP13.37□□□□□ -0.274e-6■□□□□ 10.6
RUNX1-206ENST00000416754 TECPR2O15040 1411 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms