RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 PPP2R1AP30153 589 aa17.99■□□□□ 0.47
CHEK2-210ENST00000416671 FAM43AQ8N2R8 423 aa17.99■□□□□ 0.47
CHEK2-210ENST00000416671 CRBNQ96SW2 442 aa17.99■□□□□ 0.47
CHEK2-210ENST00000416671 ERVK-7P63135 1459 aa17.98■□□□□ 0.47
CHEK2-210ENST00000416671 ADAMTS8Q9UP79 889 aa17.97■□□□□ 0.47
CHEK2-210ENST00000416671 PREX1Q8TCU6 1659 aa17.97■□□□□ 0.47
CHEK2-210ENST00000416671 NRXN1Q9ULB1 1477 aa17.96■□□□□ 0.47
CHEK2-210ENST00000416671 PIK3C2BO00750 1634 aa17.96■□□□□ 0.47
CHEK2-210ENST00000416671 KDM5AP29375 1690 aaKnown RBP17.96■□□□□ 0.46
CHEK2-210ENST00000416671 FRAT2O75474 233 aaPredicted RBP17.94■□□□□ 0.46
CHEK2-210ENST00000416671 ESF1Q9H501 851 aaKnown RBP17.94■□□□□ 0.46
CHEK2-210ENST00000416671 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
CHEK2-210ENST00000416671 CARD14Q9BXL6 1004 aa17.94■□□□□ 0.46
CHEK2-210ENST00000416671 CENPJQ9HC77 1338 aaPredicted RBP17.94■□□□□ 0.46
CHEK2-210ENST00000416671 PIK3C2GO75747 1445 aa17.94■□□□□ 0.46
CHEK2-210ENST00000416671 ASXL1Q8IXJ9 1541 aa17.94■□□□□ 0.46
CHEK2-210ENST00000416671 PPLO60437 1756 aa17.94■□□□□ 0.46
CHEK2-210ENST00000416671 C14orf93Q9H972 538 aaKnown RBP17.93■□□□□ 0.46
CHEK2-210ENST00000416671 FAM161AQ3B820 660 aa17.93■□□□□ 0.46
CHEK2-210ENST00000416671 SLC52A1Q9NWF4 448 aa17.93■□□□□ 0.46
CHEK2-210ENST00000416671 MYO5BQ9ULV0 1848 aa17.92■□□□□ 0.46
CHEK2-210ENST00000416671 KDM2BQ8NHM5 1336 aa17.92■□□□□ 0.46
CHEK2-210ENST00000416671 BLMP54132 1417 aaPredicted RBP17.92■□□□□ 0.46
CHEK2-210ENST00000416671 PPP6R1Q9UPN7 881 aa17.91■□□□□ 0.46
CHEK2-210ENST00000416671 ZMYM3Q14202 1370 aa17.91■□□□□ 0.46
CHEK2-210ENST00000416671 WDR43Q15061 677 aaKnown RBP eCLIP17.91■□□□□ 0.46
CHEK2-210ENST00000416671 CENPQQ7L2Z9 268 aaPredicted RBP17.9■□□□□ 0.46
CHEK2-210ENST00000416671 CEBPAP49715 358 aaPredicted RBP17.89■□□□□ 0.46
CHEK2-210ENST00000416671 C8orf34Q49A92 452 aa17.89■□□□□ 0.46
CHEK2-210ENST00000416671 STAG3Q9UJ98 1225 aa17.89■□□□□ 0.46
CHEK2-210ENST00000416671 SAFB2Q14151 953 aaKnown RBP eCLIP17.89■□□□□ 0.45
CHEK2-210ENST00000416671 SLC12A5Q9H2X9 1139 aa17.88■□□□□ 0.45
CHEK2-210ENST00000416671 NEXMIFQ5QGS0 1516 aa17.88■□□□□ 0.45
CHEK2-210ENST00000416671 ADGRB1O14514 1584 aa17.88■□□□□ 0.45
CHEK2-210ENST00000416671 RPGRIP1LQ68CZ1 1315 aa17.88■□□□□ 0.45
CHEK2-210ENST00000416671 CCDC146Q8IYE0 955 aa17.87■□□□□ 0.45
CHEK2-210ENST00000416671 TMEM131LA2VDJ0 1609 aa17.87■□□□□ 0.45
CHEK2-210ENST00000416671 VIRMAQ69YN4 1812 aaKnown RBP17.87■□□□□ 0.45
CHEK2-210ENST00000416671 SETBP1Q9Y6X0 1596 aa17.87■□□□□ 0.45
CHEK2-210ENST00000416671 INSRP06213 1382 aa17.86■□□□□ 0.45
CHEK2-210ENST00000416671 C20orf194Q5TEA3 1177 aa17.86■□□□□ 0.45
CHEK2-210ENST00000416671 MYO3AQ8NEV4 1616 aa17.86■□□□□ 0.45
CHEK2-210ENST00000416671 TNNT2P45379 298 aaPredicted RBP17.86■□□□□ 0.45
CHEK2-210ENST00000416671 VGFO15240 615 aaPredicted RBP17.85■□□□□ 0.45
CHEK2-210ENST00000416671 STK26Q9P289 416 aa17.85■□□□□ 0.45
CHEK2-210ENST00000416671 QRICH2Q9H0J4 1663 aa17.85■□□□□ 0.45
CHEK2-210ENST00000416671 SLC24A1O60721 1099 aa17.85■□□□□ 0.45
CHEK2-210ENST00000416671 PLEKHH1Q9ULM0 1364 aa17.84■□□□□ 0.45
CHEK2-210ENST00000416671 SBNO2Q9Y2G9 1366 aa17.84■□□□□ 0.45
CHEK2-210ENST00000416671 SPATA31D1Q6ZQQ2 1576 aa17.84■□□□□ 0.45
CHEK2-210ENST00000416671 NPC1L1Q9UHC9 1359 aa17.82■□□□□ 0.44
CHEK2-210ENST00000416671 NSD3Q9BZ95 1437 aa17.81■□□□□ 0.44
CHEK2-210ENST00000416671 CABP2Q9NPB3 220 aa17.8■□□□□ 0.44
CHEK2-210ENST00000416671 A2ML1A8K2U0 1454 aa17.79■□□□□ 0.44
CHEK2-210ENST00000416671 RGS3P49796 1198 aa17.78■□□□□ 0.44
CHEK2-210ENST00000416671 APAF1O14727 1248 aa17.78■□□□□ 0.44
CHEK2-210ENST00000416671 TNRQ92752 1358 aa17.77■□□□□ 0.44
CHEK2-210ENST00000416671 MORC1Q86VD1 984 aa17.77■□□□□ 0.43
CHEK2-210ENST00000416671 POGKQ9P215 609 aa17.77■□□□□ 0.43
CHEK2-210ENST00000416671 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.76■□□□□ 0.43
CHEK2-210ENST00000416671 ARHGEF28Q8N1W1 1705 aaKnown RBP17.76■□□□□ 0.43
CHEK2-210ENST00000416671 L1TD1Q5T7N2 865 aaKnown RBP17.76■□□□□ 0.43
CHEK2-210ENST00000416671 EVC2Q86UK5 1308 aa17.75■□□□□ 0.43
CHEK2-210ENST00000416671 RIMS2Q9UQ26 1411 aa17.75■□□□□ 0.43
CHEK2-210ENST00000416671 DUSP27Q5VZP5 1158 aa17.75■□□□□ 0.43
CHEK2-210ENST00000416671 RRAGDQ9NQL2 400 aaPredicted RBP17.75■□□□□ 0.43
CHEK2-210ENST00000416671 TULP4Q9NRJ4 1543 aa17.74■□□□□ 0.43
CHEK2-210ENST00000416671 GLIPR1L2Q4G1C9 344 aa17.74■□□□□ 0.43
CHEK2-210ENST00000416671 SPINK5Q9NQ38 1064 aaPredicted RBP17.74■□□□□ 0.43
CHEK2-210ENST00000416671 GOLGA2Q08379 1002 aa17.74■□□□□ 0.43
CHEK2-210ENST00000416671 ZFYVE9O95405 1425 aa17.73■□□□□ 0.43
CHEK2-210ENST00000416671 ZNF521Q96K83 1311 aa17.73■□□□□ 0.43
CHEK2-210ENST00000416671 MINK1Q8N4C8 1332 aaPredicted RBP17.72■□□□□ 0.43
CHEK2-210ENST00000416671 SRPK2P78362 688 aaKnown RBP17.72■□□□□ 0.43
CHEK2-210ENST00000416671 PKNOX2Q96KN3 472 aa17.72■□□□□ 0.43
CHEK2-210ENST00000416671 PRAM1Q96QH2 718 aa17.71■□□□□ 0.43
CHEK2-210ENST00000416671 BECN1Q14457 450 aa17.71■□□□□ 0.43
CHEK2-210ENST00000416671 DMRT2Q9Y5R5 561 aa17.71■□□□□ 0.43
CHEK2-210ENST00000416671 FER1L4A9Z1Z3 1794 aa17.7■□□□□ 0.42
CHEK2-210ENST00000416671 C3P01024 1663 aa17.7■□□□□ 0.42
CHEK2-210ENST00000416671 NEUROD2Q15784 382 aa17.69■□□□□ 0.42
CHEK2-210ENST00000416671 CGNL1Q0VF96 1302 aa17.69■□□□□ 0.42
CHEK2-210ENST00000416671 MTHFSP49914 203 aa17.69■□□□□ 0.42
CHEK2-210ENST00000416671 SLFN5Q08AF3 891 aa17.68■□□□□ 0.42
CHEK2-210ENST00000416671 USP19O94966 1318 aa17.68■□□□□ 0.42
CHEK2-210ENST00000416671 ALKQ9UM73 1620 aa17.68■□□□□ 0.42
CHEK2-210ENST00000416671 POLR3AO14802 1390 aaPredicted RBP17.67■□□□□ 0.42
CHEK2-210ENST00000416671 RRP7AQ9Y3A4 280 aaKnown RBP17.67■□□□□ 0.42
CHEK2-210ENST00000416671 PTPRMP28827 1452 aa17.67■□□□□ 0.42
CHEK2-210ENST00000416671 ANKRD36BQ8N2N9 1353 aa17.66■□□□□ 0.42
CHEK2-210ENST00000416671 LTKP29376 864 aa17.66■□□□□ 0.42
CHEK2-210ENST00000416671 SLKQ9H2G2 1235 aaPredicted RBP17.66■□□□□ 0.42
CHEK2-210ENST00000416671 YTHDC2Q9H6S0 1430 aaKnown RBP17.65■□□□□ 0.42
CHEK2-210ENST00000416671 A0A1W2PP64 1363 aa17.65■□□□□ 0.42
CHEK2-210ENST00000416671 UBR1Q8IWV7 1749 aa17.65■□□□□ 0.42
CHEK2-210ENST00000416671 GGNBP2Q9H3C7 697 aa17.64■□□□□ 0.41
CHEK2-210ENST00000416671 TMEM2Q9UHN6 1383 aa17.64■□□□□ 0.41
CHEK2-210ENST00000416671 WAPLQ7Z5K2 1190 aa17.63■□□□□ 0.41
CHEK2-210ENST00000416671 NAP1L5Q96NT1 182 aaPredicted RBP17.63■□□□□ 0.41
CHEK2-210ENST00000416671 METP08581 1390 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms