RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 RRBP1Q9P2E9 1410 aaKnown RBP15.11■□□□□ 0.01
MDC1-202ENST00000416571 COL22A1Q8NFW1 1626 aaPredicted RBP15.11■□□□□ 0.01
MDC1-202ENST00000416571 SLC4A1APQ9BWU0 796 aaKnown RBP15.11■□□□□ 0.01
MDC1-202ENST00000416571 FOXD1Q16676 465 aa15.1■□□□□ 0.01
MDC1-202ENST00000416571 ESCO1Q5FWF5 840 aa15.1■□□□□ 0.01
MDC1-202ENST00000416571 NPHP3Q7Z494 1330 aa15.1■□□□□ 0.01
MDC1-202ENST00000416571 CDC42BPGQ6DT37 1551 aa15.1■□□□□ 0.01
MDC1-202ENST00000416571 ZRANB1Q9UGI0 708 aa15.09■□□□□ 0.01
MDC1-202ENST00000416571 FNBP4Q8N3X1 1017 aaPredicted RBP15.08■□□□□ 0
MDC1-202ENST00000416571 MARF1Q9Y4F3 1742 aaKnown RBP15.08■□□□□ 0
MDC1-202ENST00000416571 ATRNO75882 1429 aa15.07■□□□□ 0
MDC1-202ENST00000416571 LRPPRCP42704 1394 aaKnown RBP15.06■□□□□ 0
MDC1-202ENST00000416571 MYOM2P54296 1465 aa15.06■□□□□ 0
MDC1-202ENST00000416571 PXDNQ92626 1479 aa15.05■□□□□ -0
MDC1-202ENST00000416571 CCDC144AA2RUR9 1427 aa15.04■□□□□ -0
MDC1-202ENST00000416571 NUTM2FA1L443 756 aa15.04■□□□□ -0
MDC1-202ENST00000416571 FOXO3O43524 673 aa15.04■□□□□ -0
MDC1-202ENST00000416571 XPCQ01831 940 aaPredicted RBP15.04■□□□□ -0
MDC1-202ENST00000416571 STK26Q9P289 416 aa15.04■□□□□ -0
MDC1-202ENST00000416571 RGL3Q3MIN7 710 aa15.02■□□□□ -0
MDC1-202ENST00000416571 BCL9LQ86UU0 1499 aa15.01□□□□□ -0.01
MDC1-202ENST00000416571 KNDC1Q76NI1 1749 aa15.01□□□□□ -0.01
MDC1-202ENST00000416571 ADGRF5Q8IZF2 1346 aa15.01□□□□□ -0.01
MDC1-202ENST00000416571 CCDC125Q86Z20 511 aa15.01□□□□□ -0.01
MDC1-202ENST00000416571 TECPR2O15040 1411 aa15□□□□□ -0.01
MDC1-202ENST00000416571 TNKS1BP1Q9C0C2 1729 aaKnown RBP15□□□□□ -0.01
MDC1-202ENST00000416571 IFT172Q9UG01 1749 aa15□□□□□ -0.01
MDC1-202ENST00000416571 ANKRD30BQ9BXX2 1392 aa15□□□□□ -0.01
MDC1-202ENST00000416571 KIF1AQ12756 1690 aa15□□□□□ -0.01
MDC1-202ENST00000416571 WAPLQ7Z5K2 1190 aa15□□□□□ -0.01
MDC1-202ENST00000416571 GJD4Q96KN9 370 aaPredicted RBP15□□□□□ -0.01
MDC1-202ENST00000416571 FMN2Q9NZ56 1722 aa15□□□□□ -0.01
MDC1-202ENST00000416571 HAP1P54257 671 aaPredicted RBP14.98□□□□□ -0.01
MDC1-202ENST00000416571 ABCC11Q96J66 1382 aa14.98□□□□□ -0.01
MDC1-202ENST00000416571 TMEM132EQ6IEE7 984 aa14.97□□□□□ -0.01
MDC1-202ENST00000416571 UNC5CLQ8IV45 518 aa14.97□□□□□ -0.01
MDC1-202ENST00000416571 PLEKHH1Q9ULM0 1364 aa14.97□□□□□ -0.01
MDC1-202ENST00000416571 SPATA31A3Q5VYP0 1347 aa14.96□□□□□ -0.01
MDC1-202ENST00000416571 USP32Q8NFA0 1604 aa14.96□□□□□ -0.01
MDC1-202ENST00000416571 SPATA31E1Q6ZUB1 1445 aa14.96□□□□□ -0.01
MDC1-202ENST00000416571 PIK3C2GO75747 1445 aa14.95□□□□□ -0.02
MDC1-202ENST00000416571 YTHDC2Q9H6S0 1430 aaKnown RBP14.95□□□□□ -0.02
MDC1-202ENST00000416571 KRT28Q7Z3Y7 464 aa14.95□□□□□ -0.02
MDC1-202ENST00000416571 SLIT2O94813 1529 aa14.95□□□□□ -0.02
MDC1-202ENST00000416571 RALGAPBQ86X10 1494 aa14.95□□□□□ -0.02
MDC1-202ENST00000416571 GLI3P10071 1580 aa14.94□□□□□ -0.02
MDC1-202ENST00000416571 PSME1Q06323 249 aa14.94□□□□□ -0.02
MDC1-202ENST00000416571 EP400Q96L91 3159 aa14.93□□□□□ -0.02
MDC1-202ENST00000416571 RGPD8O14715 1765 aaPredicted RBP14.93□□□□□ -0.02
MDC1-202ENST00000416571 SF3B2Q13435 895 aaKnown RBP14.93□□□□□ -0.02
MDC1-202ENST00000416571 MPHOSPH9Q99550 1183 aa14.93□□□□□ -0.02
MDC1-202ENST00000416571 BLMP54132 1417 aaPredicted RBP14.92□□□□□ -0.02
MDC1-202ENST00000416571 TNS3Q68CZ2 1445 aa14.92□□□□□ -0.02
MDC1-202ENST00000416571 LRP5O75197 1615 aa14.92□□□□□ -0.02
MDC1-202ENST00000416571 PLEKHG5O94827 1062 aa14.92□□□□□ -0.02
MDC1-202ENST00000416571 PLCH1Q4KWH8 1693 aa14.92□□□□□ -0.02
MDC1-202ENST00000416571 BRWD3Q6RI45 1802 aa14.92□□□□□ -0.02
MDC1-202ENST00000416571 LMOD2Q6P5Q4 547 aa14.91□□□□□ -0.02
MDC1-202ENST00000416571 PHF8Q9UPP1 1060 aa14.91□□□□□ -0.02
MDC1-202ENST00000416571 CCDC9Q9Y3X0 531 aaKnown RBP14.91□□□□□ -0.02
MDC1-202ENST00000416571 NWD2Q9ULI1 1742 aa14.91□□□□□ -0.02
MDC1-202ENST00000416571 DHX57Q6P158 1386 aaKnown RBP14.9□□□□□ -0.02
MDC1-202ENST00000416571 SIRT1Q96EB6 747 aa14.9□□□□□ -0.02
MDC1-202ENST00000416571 SEPT12Q8IYM1 358 aa14.89□□□□□ -0.03
MDC1-202ENST00000416571 CABLES1Q8TDN4 633 aa14.89□□□□□ -0.03
MDC1-202ENST00000416571 ABCA3Q99758 1704 aa14.89□□□□□ -0.03
MDC1-202ENST00000416571 ARHGEF10O15013 1369 aa14.88□□□□□ -0.03
MDC1-202ENST00000416571 A0A0G2JS52 829 aa14.88□□□□□ -0.03
MDC1-202ENST00000416571 MYT1Q01538 1121 aa14.88□□□□□ -0.03
MDC1-202ENST00000416571 SAFB2Q14151 953 aaKnown RBP eCLIP14.88□□□□□ -0.03
MDC1-202ENST00000416571 VPS72Q15906 364 aa14.88□□□□□ -0.03
MDC1-202ENST00000416571 NRXN1Q9ULB1 1477 aa14.88□□□□□ -0.03
MDC1-202ENST00000416571 C14orf93Q9H972 538 aaKnown RBP14.87□□□□□ -0.03
MDC1-202ENST00000416571 POGKQ9P215 609 aa14.87□□□□□ -0.03
MDC1-202ENST00000416571 SBNO1A3KN83 1393 aa14.86□□□□□ -0.03
MDC1-202ENST00000416571 CFAP70Q5T0N1 1121 aa14.86□□□□□ -0.03
MDC1-202ENST00000416571 DEFB132Q7Z7B7 95 aa14.86□□□□□ -0.03
MDC1-202ENST00000416571 PRAM1Q96QH2 718 aa14.86□□□□□ -0.03
MDC1-202ENST00000416571 ACIN1Q9UKV3 1341 aaKnown RBP14.86□□□□□ -0.03
MDC1-202ENST00000416571 KRT27Q7Z3Y8 459 aa14.85□□□□□ -0.03
MDC1-202ENST00000416571 PMFBP1Q8TBY8 1022 aa14.84□□□□□ -0.03
MDC1-202ENST00000416571 ANKARQ7Z5J8 1434 aa14.83□□□□□ -0.03
MDC1-202ENST00000416571 DLC1Q96QB1 1528 aa14.83□□□□□ -0.04
MDC1-202ENST00000416571 ADGRB2O60241 1585 aa14.82□□□□□ -0.04
MDC1-202ENST00000416571 ONECUT3O60422 494 aaPredicted RBP14.82□□□□□ -0.04
MDC1-202ENST00000416571 YY1P25490 414 aa14.82□□□□□ -0.04
MDC1-202ENST00000416571 GPRASP1Q5JY77 1395 aa14.82□□□□□ -0.04
MDC1-202ENST00000416571 BAG6P46379 1132 aa14.81□□□□□ -0.04
MDC1-202ENST00000416571 EIF3AQ14152 1382 aaKnown RBP14.81□□□□□ -0.04
MDC1-202ENST00000416571 NRAPQ86VF7 1730 aa14.8□□□□□ -0.04
MDC1-202ENST00000416571 COL14A1Q05707 1796 aaKnown RBP14.8□□□□□ -0.04
MDC1-202ENST00000416571 FAM83GA6ND36 823 aa14.8□□□□□ -0.04
MDC1-202ENST00000416571 BTG4Q9NY30 223 aa14.8□□□□□ -0.04
MDC1-202ENST00000416571 TRPM3Q9HCF6 1732 aaPredicted RBP14.8□□□□□ -0.04
MDC1-202ENST00000416571 FAM98CQ17RN3 349 aaKnown RBP14.79□□□□□ -0.04
MDC1-202ENST00000416571 HIRIP3Q9BW71 556 aaPredicted RBP14.79□□□□□ -0.04
MDC1-202ENST00000416571 ALS2Q96Q42 1657 aa14.78□□□□□ -0.04
MDC1-202ENST00000416571 TRAK1Q9UPV9 953 aa14.78□□□□□ -0.04
MDC1-202ENST00000416571 RGPD1P0DJD0 1748 aa14.78□□□□□ -0.04
MDC1-202ENST00000416571 TULP4Q9NRJ4 1543 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms