RNA–Protein interactions for RNA: ENST00000416206.5

ERGIC3-206, Transcript of ERGIC and golgi 3, humanhuman

TSL 5

Gene ERGIC3, Length 1,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-206ENST00000416206 PCGF6Q9BYE7 350 aa17.1■□□□□ 0.33
ERGIC3-206ENST00000416206 RPGRIP1LQ68CZ1 1315 aa17.1■□□□□ 0.33
ERGIC3-206ENST00000416206 EP400Q96L91 3159 aa17.1■□□□□ 0.33
ERGIC3-206ENST00000416206 QTRT2Q9H974 415 aaKnown RBP17.09■□□□□ 0.33
ERGIC3-206ENST00000416206 TECPR2O15040 1411 aa17.09■□□□□ 0.33
ERGIC3-206ENST00000416206 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.08■□□□□ 0.32
ERGIC3-206ENST00000416206 ADAMTS2O95450 1211 aa17.08■□□□□ 0.32
ERGIC3-206ENST00000416206 FMN2Q9NZ56 1722 aa17.07■□□□□ 0.32
ERGIC3-206ENST00000416206 ATRNO75882 1429 aa17.07■□□□□ 0.32
ERGIC3-206ENST00000416206 SPATA31E1Q6ZUB1 1445 aa17.06■□□□□ 0.32
ERGIC3-206ENST00000416206 KIF1AQ12756 1690 aa17.05■□□□□ 0.32
ERGIC3-206ENST00000416206 NGLY1Q96IV0 654 aa17.05■□□□□ 0.32
ERGIC3-206ENST00000416206 SLC4A1APQ9BWU0 796 aaKnown RBP17.05■□□□□ 0.32
ERGIC3-206ENST00000416206 SRCAPQ6ZRS2 3230 aa17.04■□□□□ 0.32
ERGIC3-206ENST00000416206 ATAD2Q6PL18 1390 aa17.04■□□□□ 0.32
ERGIC3-206ENST00000416206 FNBP4Q8N3X1 1017 aaPredicted RBP17.03■□□□□ 0.32
ERGIC3-206ENST00000416206 USP21Q9UK80 565 aa17.03■□□□□ 0.32
ERGIC3-206ENST00000416206 CCDC144AA2RUR9 1427 aa17.03■□□□□ 0.32
ERGIC3-206ENST00000416206 PIK3C2GO75747 1445 aa17.03■□□□□ 0.32
ERGIC3-206ENST00000416206 NPHP3Q7Z494 1330 aa17.02■□□□□ 0.32
ERGIC3-206ENST00000416206 ADGRF5Q8IZF2 1346 aa17.02■□□□□ 0.32
ERGIC3-206ENST00000416206 BCL9LQ86UU0 1499 aa17.02■□□□□ 0.32
ERGIC3-206ENST00000416206 USP32Q8NFA0 1604 aa17.01■□□□□ 0.31
ERGIC3-206ENST00000416206 TRPC5Q9UL62 973 aaPredicted RBP17.01■□□□□ 0.31
ERGIC3-206ENST00000416206 ABCA3Q99758 1704 aa17.01■□□□□ 0.31
ERGIC3-206ENST00000416206 LRPPRCP42704 1394 aaKnown RBP17.01■□□□□ 0.31
ERGIC3-206ENST00000416206 FOXD1Q16676 465 aa17■□□□□ 0.31
ERGIC3-206ENST00000416206 PLEKHH1Q9ULM0 1364 aa17■□□□□ 0.31
ERGIC3-206ENST00000416206 GLI3P10071 1580 aa16.99■□□□□ 0.31
ERGIC3-206ENST00000416206 ANKRD30BQ9BXX2 1392 aa16.99■□□□□ 0.31
ERGIC3-206ENST00000416206 RGPD8O14715 1765 aaPredicted RBP16.98■□□□□ 0.31
ERGIC3-206ENST00000416206 ESCO1Q5FWF5 840 aa16.98■□□□□ 0.31
ERGIC3-206ENST00000416206 ABCC11Q96J66 1382 aa16.97■□□□□ 0.31
ERGIC3-206ENST00000416206 PLCH1Q4KWH8 1693 aa16.97■□□□□ 0.31
ERGIC3-206ENST00000416206 SLIT2O94813 1529 aa16.96■□□□□ 0.31
ERGIC3-206ENST00000416206 XPCQ01831 940 aaPredicted RBP16.96■□□□□ 0.31
ERGIC3-206ENST00000416206 YTHDC2Q9H6S0 1430 aaKnown RBP16.96■□□□□ 0.3
ERGIC3-206ENST00000416206 NRXN1Q9ULB1 1477 aa16.95■□□□□ 0.3
ERGIC3-206ENST00000416206 FOXO3O43524 673 aa16.95■□□□□ 0.3
ERGIC3-206ENST00000416206 WAPLQ7Z5K2 1190 aa16.95■□□□□ 0.3
ERGIC3-206ENST00000416206 BRWD3Q6RI45 1802 aa16.95■□□□□ 0.3
ERGIC3-206ENST00000416206 RALGAPBQ86X10 1494 aa16.93■□□□□ 0.3
ERGIC3-206ENST00000416206 NWD2Q9ULI1 1742 aa16.93■□□□□ 0.3
ERGIC3-206ENST00000416206 STK26Q9P289 416 aa16.93■□□□□ 0.3
ERGIC3-206ENST00000416206 NUTM2FA1L443 756 aa16.92■□□□□ 0.3
ERGIC3-206ENST00000416206 TNS3Q68CZ2 1445 aa16.92■□□□□ 0.3
ERGIC3-206ENST00000416206 ADGRB2O60241 1585 aa16.92■□□□□ 0.3
ERGIC3-206ENST00000416206 RGL3Q3MIN7 710 aa16.91■□□□□ 0.3
ERGIC3-206ENST00000416206 TMEM132EQ6IEE7 984 aa16.91■□□□□ 0.3
ERGIC3-206ENST00000416206 SPATA31A3Q5VYP0 1347 aa16.91■□□□□ 0.3
ERGIC3-206ENST00000416206 GJD4Q96KN9 370 aaPredicted RBP16.89■□□□□ 0.29
ERGIC3-206ENST00000416206 NRAPQ86VF7 1730 aa16.89■□□□□ 0.29
ERGIC3-206ENST00000416206 TRPM3Q9HCF6 1732 aaPredicted RBP16.89■□□□□ 0.29
ERGIC3-206ENST00000416206 DLC1Q96QB1 1528 aa16.88■□□□□ 0.29
ERGIC3-206ENST00000416206 MPHOSPH9Q99550 1183 aa16.88■□□□□ 0.29
ERGIC3-206ENST00000416206 ADGRB1O14514 1584 aa16.86■□□□□ 0.29
ERGIC3-206ENST00000416206 ALS2Q96Q42 1657 aa16.86■□□□□ 0.29
ERGIC3-206ENST00000416206 UNC5CLQ8IV45 518 aa16.86■□□□□ 0.29
ERGIC3-206ENST00000416206 CRYBG1Q9Y4K1 1723 aa16.86■□□□□ 0.29
ERGIC3-206ENST00000416206 BLMP54132 1417 aaPredicted RBP16.85■□□□□ 0.29
ERGIC3-206ENST00000416206 SIRT1Q96EB6 747 aa16.84■□□□□ 0.29
ERGIC3-206ENST00000416206 SBNO1A3KN83 1393 aa16.84■□□□□ 0.29
ERGIC3-206ENST00000416206 KRT28Q7Z3Y7 464 aa16.83■□□□□ 0.28
ERGIC3-206ENST00000416206 ANKARQ7Z5J8 1434 aa16.83■□□□□ 0.28
ERGIC3-206ENST00000416206 CCDC125Q86Z20 511 aa16.83■□□□□ 0.28
ERGIC3-206ENST00000416206 C14orf93Q9H972 538 aaKnown RBP16.83■□□□□ 0.28
ERGIC3-206ENST00000416206 ZRANB1Q9UGI0 708 aa16.82■□□□□ 0.28
ERGIC3-206ENST00000416206 PHF8Q9UPP1 1060 aa16.82■□□□□ 0.28
ERGIC3-206ENST00000416206 DHX57Q6P158 1386 aaKnown RBP16.81■□□□□ 0.28
ERGIC3-206ENST00000416206 ARHGEF10O15013 1369 aa16.8■□□□□ 0.28
ERGIC3-206ENST00000416206 CFAP70Q5T0N1 1121 aa16.8■□□□□ 0.28
ERGIC3-206ENST00000416206 LRP5O75197 1615 aa16.8■□□□□ 0.28
ERGIC3-206ENST00000416206 TULP4Q9NRJ4 1543 aa16.8■□□□□ 0.28
ERGIC3-206ENST00000416206 COL14A1Q05707 1796 aaKnown RBP16.79■□□□□ 0.28
ERGIC3-206ENST00000416206 CABLES1Q8TDN4 633 aa16.79■□□□□ 0.28
ERGIC3-206ENST00000416206 PRAM1Q96QH2 718 aa16.79■□□□□ 0.28
ERGIC3-206ENST00000416206 VPS72Q15906 364 aa16.78■□□□□ 0.28
ERGIC3-206ENST00000416206 ARHGEF28Q8N1W1 1705 aaKnown RBP16.78■□□□□ 0.28
ERGIC3-206ENST00000416206 SAFB2Q14151 953 aaKnown RBP eCLIP16.77■□□□□ 0.28
ERGIC3-206ENST00000416206 ITSN1Q15811 1721 aa16.76■□□□□ 0.27
ERGIC3-206ENST00000416206 THSD7AQ9UPZ6 1657 aa16.76■□□□□ 0.27
ERGIC3-206ENST00000416206 PSME1Q06323 249 aa16.76■□□□□ 0.27
ERGIC3-206ENST00000416206 SEPT12Q8IYM1 358 aa16.76■□□□□ 0.27
ERGIC3-206ENST00000416206 PHRF1Q9P1Y6 1649 aaKnown RBP16.75■□□□□ 0.27
ERGIC3-206ENST00000416206 HAP1P54257 671 aaPredicted RBP16.75■□□□□ 0.27
ERGIC3-206ENST00000416206 RGPD1P0DJD0 1748 aa16.75■□□□□ 0.27
ERGIC3-206ENST00000416206 TNS1Q9HBL0 1735 aaKnown RBP16.75■□□□□ 0.27
ERGIC3-206ENST00000416206 DEFB132Q7Z7B7 95 aa16.74■□□□□ 0.27
ERGIC3-206ENST00000416206 RAB3GAP2Q9H2M9 1393 aa16.74■□□□□ 0.27
ERGIC3-206ENST00000416206 PRR36Q9H6K5 1346 aa16.73■□□□□ 0.27
ERGIC3-206ENST00000416206 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
ERGIC3-206ENST00000416206 TOPAZ1Q8N9V7 1692 aa16.73■□□□□ 0.27
ERGIC3-206ENST00000416206 ONECUT3O60422 494 aaPredicted RBP16.73■□□□□ 0.27
ERGIC3-206ENST00000416206 PLEKHG5O94827 1062 aa16.73■□□□□ 0.27
ERGIC3-206ENST00000416206 PMFBP1Q8TBY8 1022 aa16.72■□□□□ 0.27
ERGIC3-206ENST00000416206 EIF3AQ14152 1382 aaKnown RBP16.72■□□□□ 0.27
ERGIC3-206ENST00000416206 ATP7BP35670 1465 aa16.72■□□□□ 0.27
ERGIC3-206ENST00000416206 FAM83GA6ND36 823 aa16.71■□□□□ 0.27
ERGIC3-206ENST00000416206 LMOD2Q6P5Q4 547 aa16.71■□□□□ 0.27
ERGIC3-206ENST00000416206 KRT27Q7Z3Y8 459 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms