RNA–Protein interactions for RNA: ENST00000416104.5

LINC00222-202, long intergenic non-protein coding RNA 222, humanhuman

TSL 1 (best) BASIC

Gene LINC00222, Length 1,785 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00222-202ENST00000416104 DDX17Q92841 729 aaKnown RBP16.87■□□□□ 0.29
LINC00222-202ENST00000416104 DHX57Q6P158 1386 aaKnown RBP16.87■□□□□ 0.29
LINC00222-202ENST00000416104 STAC3Q96MF2 364 aa16.87■□□□□ 0.29
LINC00222-202ENST00000416104 YTHDC2Q9H6S0 1430 aaKnown RBP16.86■□□□□ 0.29
LINC00222-202ENST00000416104 MYOM2P54296 1465 aa16.86■□□□□ 0.29
LINC00222-202ENST00000416104 ESCO1Q5FWF5 840 aa16.86■□□□□ 0.29
LINC00222-202ENST00000416104 DCAF11Q8TEB1 546 aa16.85■□□□□ 0.29
LINC00222-202ENST00000416104 NRXN1Q9ULB1 1477 aa16.85■□□□□ 0.29
LINC00222-202ENST00000416104 SHPRHQ149N8 1683 aa16.85■□□□□ 0.29
LINC00222-202ENST00000416104 ZNF772Q68DY9 489 aaPredicted RBP16.84■□□□□ 0.29
LINC00222-202ENST00000416104 KDM2AQ9Y2K7 1162 aa16.84■□□□□ 0.29
LINC00222-202ENST00000416104 NHSL1Q5SYE7 1610 aa16.83■□□□□ 0.29
LINC00222-202ENST00000416104 LRP6O75581 1613 aa16.83■□□□□ 0.28
LINC00222-202ENST00000416104 SOS2Q07890 1332 aaPredicted RBP16.82■□□□□ 0.28
LINC00222-202ENST00000416104 PLEKHH1Q9ULM0 1364 aa16.82■□□□□ 0.28
LINC00222-202ENST00000416104 NPHP3Q7Z494 1330 aa16.82■□□□□ 0.28
LINC00222-202ENST00000416104 CDC42BPGQ6DT37 1551 aa16.82■□□□□ 0.28
LINC00222-202ENST00000416104 NUTM2FA1L443 756 aa16.81■□□□□ 0.28
LINC00222-202ENST00000416104 PNPLA6Q8IY17 1366 aa16.8■□□□□ 0.28
LINC00222-202ENST00000416104 POGKQ9P215 609 aa16.8■□□□□ 0.28
LINC00222-202ENST00000416104 LAMC1P11047 1609 aa16.8■□□□□ 0.28
LINC00222-202ENST00000416104 PRAM1Q96QH2 718 aa16.79■□□□□ 0.28
LINC00222-202ENST00000416104 KNDC1Q76NI1 1749 aa16.79■□□□□ 0.28
LINC00222-202ENST00000416104 FOXO3O43524 673 aa16.79■□□□□ 0.28
LINC00222-202ENST00000416104 SAFB2Q14151 953 aaKnown RBP eCLIP16.77■□□□□ 0.28
LINC00222-202ENST00000416104 C8orf37Q96NL8 207 aa16.76■□□□□ 0.27
LINC00222-202ENST00000416104 TRAK1Q9UPV9 953 aa16.76■□□□□ 0.27
LINC00222-202ENST00000416104 AFF2P51816 1311 aa16.75■□□□□ 0.27
LINC00222-202ENST00000416104 ADAMTS2O95450 1211 aa16.74■□□□□ 0.27
LINC00222-202ENST00000416104 RXRBP28702 533 aa16.74■□□□□ 0.27
LINC00222-202ENST00000416104 NGLY1Q96IV0 654 aa16.74■□□□□ 0.27
LINC00222-202ENST00000416104 XPCQ01831 940 aaPredicted RBP16.74■□□□□ 0.27
LINC00222-202ENST00000416104 DLC1Q96QB1 1528 aa16.73■□□□□ 0.27
LINC00222-202ENST00000416104 PHF8Q9UPP1 1060 aa16.72■□□□□ 0.27
LINC00222-202ENST00000416104 PSME1Q06323 249 aa16.72■□□□□ 0.27
LINC00222-202ENST00000416104 ADGRB1O14514 1584 aa16.71■□□□□ 0.27
LINC00222-202ENST00000416104 KRT28Q7Z3Y7 464 aa16.71■□□□□ 0.27
LINC00222-202ENST00000416104 PXDNQ92626 1479 aa16.7■□□□□ 0.26
LINC00222-202ENST00000416104 QTRT2Q9H974 415 aaKnown RBP16.7■□□□□ 0.26
LINC00222-202ENST00000416104 FMN2Q9NZ56 1722 aa16.7■□□□□ 0.26
LINC00222-202ENST00000416104 MINK1Q8N4C8 1332 aaPredicted RBP16.69■□□□□ 0.26
LINC00222-202ENST00000416104 HIRIP3Q9BW71 556 aaPredicted RBP16.68■□□□□ 0.26
LINC00222-202ENST00000416104 SPATA31A3Q5VYP0 1347 aa16.68■□□□□ 0.26
LINC00222-202ENST00000416104 EIF3AQ14152 1382 aaKnown RBP16.68■□□□□ 0.26
LINC00222-202ENST00000416104 RBM6P78332 1123 aaKnown RBP16.67■□□□□ 0.26
LINC00222-202ENST00000416104 KIF1AQ12756 1690 aa16.67■□□□□ 0.26
LINC00222-202ENST00000416104 ANKARQ7Z5J8 1434 aa16.67■□□□□ 0.26
LINC00222-202ENST00000416104 USP21Q9UK80 565 aa16.66■□□□□ 0.26
LINC00222-202ENST00000416104 WASLO00401 505 aaPredicted RBP16.66■□□□□ 0.26
LINC00222-202ENST00000416104 FNBP4Q8N3X1 1017 aaPredicted RBP16.66■□□□□ 0.26
LINC00222-202ENST00000416104 PMFBP1Q8TBY8 1022 aa16.66■□□□□ 0.26
LINC00222-202ENST00000416104 COL22A1Q8NFW1 1626 aaPredicted RBP16.65■□□□□ 0.26
LINC00222-202ENST00000416104 HAP1P54257 671 aaPredicted RBP16.64■□□□□ 0.25
LINC00222-202ENST00000416104 TRPC5Q9UL62 973 aaPredicted RBP16.64■□□□□ 0.25
LINC00222-202ENST00000416104 CDK12Q9NYV4 1490 aaPredicted RBP16.63■□□□□ 0.25
LINC00222-202ENST00000416104 ADGRB2O60241 1585 aa16.63■□□□□ 0.25
LINC00222-202ENST00000416104 LMOD2Q6P5Q4 547 aa16.62■□□□□ 0.25
LINC00222-202ENST00000416104 SBNO1A3KN83 1393 aa16.62■□□□□ 0.25
LINC00222-202ENST00000416104 TNS3Q68CZ2 1445 aa16.61■□□□□ 0.25
LINC00222-202ENST00000416104 GPRASP1Q5JY77 1395 aa16.61■□□□□ 0.25
LINC00222-202ENST00000416104 NBPF1Q3BBV0 1214 aa16.6■□□□□ 0.25
LINC00222-202ENST00000416104 NGDNQ8NEJ9 315 aaKnown RBP16.6■□□□□ 0.25
LINC00222-202ENST00000416104 L3MBTL2Q969R5 705 aa16.6■□□□□ 0.25
LINC00222-202ENST00000416104 ARHGEF10O15013 1369 aa16.6■□□□□ 0.25
LINC00222-202ENST00000416104 PRR36Q9H6K5 1346 aa16.6■□□□□ 0.25
LINC00222-202ENST00000416104 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
LINC00222-202ENST00000416104 SIN3AQ96ST3 1273 aa16.59■□□□□ 0.25
LINC00222-202ENST00000416104 TULP4Q9NRJ4 1543 aa16.59■□□□□ 0.25
LINC00222-202ENST00000416104 NUDT16Q96DE0 195 aaKnown RBP16.59■□□□□ 0.25
LINC00222-202ENST00000416104 CDK19Q9BWU1 502 aa16.59■□□□□ 0.25
LINC00222-202ENST00000416104 RGPD8O14715 1765 aaPredicted RBP16.58■□□□□ 0.25
LINC00222-202ENST00000416104 PLEKHG5O94827 1062 aa16.57■□□□□ 0.24
LINC00222-202ENST00000416104 CABLES1Q8TDN4 633 aa16.57■□□□□ 0.24
LINC00222-202ENST00000416104 UPF1Q92900 1129 aaKnown RBP eCLIP16.57■□□□□ 0.24
LINC00222-202ENST00000416104 KIAA1210Q9ULL0 1709 aa16.57■□□□□ 0.24
LINC00222-202ENST00000416104 USP32Q8NFA0 1604 aa16.56■□□□□ 0.24
LINC00222-202ENST00000416104 UNC5CLQ8IV45 518 aa16.56■□□□□ 0.24
LINC00222-202ENST00000416104 ATRNO75882 1429 aa16.56■□□□□ 0.24
LINC00222-202ENST00000416104 RGS12O14924 1447 aa16.55■□□□□ 0.24
LINC00222-202ENST00000416104 ARHGEF28Q8N1W1 1705 aaKnown RBP16.55■□□□□ 0.24
LINC00222-202ENST00000416104 BCL9LQ86UU0 1499 aa16.55■□□□□ 0.24
LINC00222-202ENST00000416104 PAK3O75914 559 aaPredicted RBP16.54■□□□□ 0.24
LINC00222-202ENST00000416104 GJD4Q96KN9 370 aaPredicted RBP16.54■□□□□ 0.24
LINC00222-202ENST00000416104 CCDC61Q9Y6R9 512 aa16.54■□□□□ 0.24
LINC00222-202ENST00000416104 CENPJQ9HC77 1338 aaPredicted RBP16.54■□□□□ 0.24
LINC00222-202ENST00000416104 TRIM26Q12899 539 aaPredicted RBP16.52■□□□□ 0.24
LINC00222-202ENST00000416104 SRPK2P78362 688 aaKnown RBP16.51■□□□□ 0.23
LINC00222-202ENST00000416104 ATP7BP35670 1465 aa16.51■□□□□ 0.23
LINC00222-202ENST00000416104 SLIT2O94813 1529 aa16.51■□□□□ 0.23
LINC00222-202ENST00000416104 MARF1Q9Y4F3 1742 aaKnown RBP16.51■□□□□ 0.23
LINC00222-202ENST00000416104 PLEKHG3A1L390 1219 aa16.5■□□□□ 0.23
LINC00222-202ENST00000416104 FAM83GA6ND36 823 aa16.49■□□□□ 0.23
LINC00222-202ENST00000416104 NBPF8Q3BBV2 869 aa16.49■□□□□ 0.23
LINC00222-202ENST00000416104 ACEP12821 1306 aa16.49■□□□□ 0.23
LINC00222-202ENST00000416104 ATAD2Q6PL18 1390 aa16.49■□□□□ 0.23
LINC00222-202ENST00000416104 ROCK2O75116 1388 aaKnown RBP16.48■□□□□ 0.23
LINC00222-202ENST00000416104 VPS72Q15906 364 aa16.48■□□□□ 0.23
LINC00222-202ENST00000416104 CCDC9Q9Y3X0 531 aaKnown RBP16.48■□□□□ 0.23
LINC00222-202ENST00000416104 POLR3AO14802 1390 aaPredicted RBP16.47■□□□□ 0.23
LINC00222-202ENST00000416104 ITSN1Q15811 1721 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms