RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 MST1RQ04912 1400 aa13.05□□□□□ -0.32
CHRNA1-206ENST00000416004 YTHDC2Q9H6S0 1430 aaKnown RBP13.05□□□□□ -0.32
CHRNA1-206ENST00000416004 ABCC11Q96J66 1382 aa13.05□□□□□ -0.32
CHRNA1-206ENST00000416004 NRXN1Q9ULB1 1477 aa13.04□□□□□ -0.32
CHRNA1-206ENST00000416004 TMEM132EQ6IEE7 984 aa13.04□□□□□ -0.32
CHRNA1-206ENST00000416004 BRINP3Q76B58 766 aa13.04□□□□□ -0.32
CHRNA1-206ENST00000416004 ASXL1Q8IXJ9 1541 aa13.04□□□□□ -0.32
CHRNA1-206ENST00000416004 TECPR2O15040 1411 aa13.04□□□□□ -0.32
CHRNA1-206ENST00000416004 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
CHRNA1-206ENST00000416004 COL16A1Q07092 1604 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-206ENST00000416004 CFAP70Q5T0N1 1121 aa13.03□□□□□ -0.32
CHRNA1-206ENST00000416004 MEX3CQ5U5Q3 659 aaKnown RBP13.03□□□□□ -0.32
CHRNA1-206ENST00000416004 POGKQ9P215 609 aa13.03□□□□□ -0.32
CHRNA1-206ENST00000416004 LRRC59Q96AG4 307 aaKnown RBP13.02□□□□□ -0.32
CHRNA1-206ENST00000416004 SIRT1Q96EB6 747 aa13.02□□□□□ -0.32
CHRNA1-206ENST00000416004 HIRIP3Q9BW71 556 aaPredicted RBP13.02□□□□□ -0.32
CHRNA1-206ENST00000416004 SPATA31A6Q5VVP1 1343 aa13.02□□□□□ -0.32
CHRNA1-206ENST00000416004 NHSL1Q5SYE7 1610 aa13.02□□□□□ -0.33
CHRNA1-206ENST00000416004 C1orf167Q5SNV9 1468 aa13.01□□□□□ -0.33
CHRNA1-206ENST00000416004 SHPRHQ149N8 1683 aa13.01□□□□□ -0.33
CHRNA1-206ENST00000416004 RALGAPBQ86X10 1494 aa13□□□□□ -0.33
CHRNA1-206ENST00000416004 WAPLQ7Z5K2 1190 aa13□□□□□ -0.33
CHRNA1-206ENST00000416004 ESCO1Q5FWF5 840 aa12.99□□□□□ -0.33
CHRNA1-206ENST00000416004 DLC1Q96QB1 1528 aa12.99□□□□□ -0.33
CHRNA1-206ENST00000416004 NPHP3Q7Z494 1330 aa12.98□□□□□ -0.33
CHRNA1-206ENST00000416004 HSPA5P11021 654 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-206ENST00000416004 PRAM1Q96QH2 718 aa12.97□□□□□ -0.33
CHRNA1-206ENST00000416004 EIF3AQ14152 1382 aaKnown RBP12.97□□□□□ -0.33
CHRNA1-206ENST00000416004 ILDR2Q71H61 639 aa12.97□□□□□ -0.33
CHRNA1-206ENST00000416004 TRAK1Q9UPV9 953 aa12.97□□□□□ -0.33
CHRNA1-206ENST00000416004 FMN2Q9NZ56 1722 aa12.97□□□□□ -0.33
CHRNA1-206ENST00000416004 KIAA1210Q9ULL0 1709 aa12.97□□□□□ -0.33
CHRNA1-206ENST00000416004 KIF1AQ12756 1690 aa12.96□□□□□ -0.33
CHRNA1-206ENST00000416004 SAFB2Q14151 953 aaKnown RBP eCLIP12.96□□□□□ -0.33
CHRNA1-206ENST00000416004 NBPF1Q3BBV0 1214 aa12.96□□□□□ -0.33
CHRNA1-206ENST00000416004 ORAI2Q96SN7 254 aa12.96□□□□□ -0.33
CHRNA1-206ENST00000416004 TRPM1Q7Z4N2 1603 aa12.95□□□□□ -0.34
CHRNA1-206ENST00000416004 NUTM2BA6NNL0 878 aaPredicted RBP12.95□□□□□ -0.34
CHRNA1-206ENST00000416004 NUTM2EB1AL46 878 aaPredicted RBP12.95□□□□□ -0.34
CHRNA1-206ENST00000416004 EIF4G2P78344 907 aaKnown RBP eCLIP12.95□□□□□ -0.34
CHRNA1-206ENST00000416004 NUTM2AQ8IVF1 878 aaPredicted RBP12.95□□□□□ -0.34
CHRNA1-206ENST00000416004 NUTM2FA1L443 756 aa12.95□□□□□ -0.34
CHRNA1-206ENST00000416004 SOCS7O14512 581 aa12.95□□□□□ -0.34
CHRNA1-206ENST00000416004 PLEKHH1Q9ULM0 1364 aa12.95□□□□□ -0.34
CHRNA1-206ENST00000416004 ROCK2O75116 1388 aaKnown RBP12.94□□□□□ -0.34
CHRNA1-206ENST00000416004 ADGRB1O14514 1584 aa12.94□□□□□ -0.34
CHRNA1-206ENST00000416004 CARD11Q9BXL7 1154 aa12.93□□□□□ -0.34
CHRNA1-206ENST00000416004 USP47Q96K76 1375 aa12.93□□□□□ -0.34
CHRNA1-206ENST00000416004 PSME1Q06323 249 aa12.93□□□□□ -0.34
CHRNA1-206ENST00000416004 DIEXFQ68CQ4 756 aaKnown RBP12.93□□□□□ -0.34
CHRNA1-206ENST00000416004 ZNF772Q68DY9 489 aaPredicted RBP12.93□□□□□ -0.34
CHRNA1-206ENST00000416004 DDX17Q92841 729 aaKnown RBP12.92□□□□□ -0.34
CHRNA1-206ENST00000416004 GPRASP1Q5JY77 1395 aa12.92□□□□□ -0.34
CHRNA1-206ENST00000416004 ARHGEF28Q8N1W1 1705 aaKnown RBP12.91□□□□□ -0.34
CHRNA1-206ENST00000416004 SOS2Q07890 1332 aaPredicted RBP12.91□□□□□ -0.34
CHRNA1-206ENST00000416004 RGPD8O14715 1765 aaPredicted RBP12.91□□□□□ -0.34
CHRNA1-206ENST00000416004 ADGRB2O60241 1585 aa12.91□□□□□ -0.34
CHRNA1-206ENST00000416004 FOXO3O43524 673 aa12.91□□□□□ -0.34
CHRNA1-206ENST00000416004 MINK1Q8N4C8 1332 aaPredicted RBP12.9□□□□□ -0.34
CHRNA1-206ENST00000416004 PNPLA6Q8IY17 1366 aa12.9□□□□□ -0.34
CHRNA1-206ENST00000416004 PHF8Q9UPP1 1060 aa12.9□□□□□ -0.34
CHRNA1-206ENST00000416004 ANKARQ7Z5J8 1434 aa12.9□□□□□ -0.34
CHRNA1-206ENST00000416004 C11orf95C9JLR9 678 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-206ENST00000416004 ITSN1Q15811 1721 aa12.89□□□□□ -0.35
CHRNA1-206ENST00000416004 HAP1P54257 671 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-206ENST00000416004 LRP6O75581 1613 aa12.88□□□□□ -0.35
CHRNA1-206ENST00000416004 WASLO00401 505 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-206ENST00000416004 KRT28Q7Z3Y7 464 aa12.87□□□□□ -0.35
CHRNA1-206ENST00000416004 C8orf37Q96NL8 207 aa12.87□□□□□ -0.35
CHRNA1-206ENST00000416004 WASHC2AQ641Q2 1341 aa12.87□□□□□ -0.35
CHRNA1-206ENST00000416004 TULP4Q9NRJ4 1543 aa12.87□□□□□ -0.35
CHRNA1-206ENST00000416004 XPCQ01831 940 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-206ENST00000416004 COL22A1Q8NFW1 1626 aaPredicted RBP12.86□□□□□ -0.35
CHRNA1-206ENST00000416004 PXDNQ92626 1479 aa12.86□□□□□ -0.35
CHRNA1-206ENST00000416004 ST20-MTHFSA0A0A6YYL1 179 aa12.86□□□□□ -0.35
CHRNA1-206ENST00000416004 NGLY1Q96IV0 654 aa12.86□□□□□ -0.35
CHRNA1-206ENST00000416004 ADAMTS2O95450 1211 aa12.85□□□□□ -0.35
CHRNA1-206ENST00000416004 LMOD2Q6P5Q4 547 aa12.85□□□□□ -0.35
CHRNA1-206ENST00000416004 RGS17Q9UGC6 210 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-206ENST00000416004 DDX10Q13206 875 aaKnown RBP12.85□□□□□ -0.35
CHRNA1-206ENST00000416004 NGDNQ8NEJ9 315 aaKnown RBP12.85□□□□□ -0.35
CHRNA1-206ENST00000416004 AFF2P51816 1311 aa12.84□□□□□ -0.35
CHRNA1-206ENST00000416004 PMFBP1Q8TBY8 1022 aa12.84□□□□□ -0.35
CHRNA1-206ENST00000416004 CENPJQ9HC77 1338 aaPredicted RBP12.84□□□□□ -0.35
CHRNA1-206ENST00000416004 ARHGEF10O15013 1369 aa12.84□□□□□ -0.35
CHRNA1-206ENST00000416004 POTEAQ6S8J7 498 aa12.83□□□□□ -0.36
CHRNA1-206ENST00000416004 MARF1Q9Y4F3 1742 aaKnown RBP12.83□□□□□ -0.36
CHRNA1-206ENST00000416004 QRICH2Q9H0J4 1663 aa12.83□□□□□ -0.36
CHRNA1-206ENST00000416004 TNS3Q68CZ2 1445 aa12.83□□□□□ -0.36
CHRNA1-206ENST00000416004 CCDC7Q96M83 1385 aa12.83□□□□□ -0.36
CHRNA1-206ENST00000416004 KIF7Q2M1P5 1343 aa12.83□□□□□ -0.36
CHRNA1-206ENST00000416004 SPATA31A3Q5VYP0 1347 aa12.83□□□□□ -0.36
CHRNA1-206ENST00000416004 RXRBP28702 533 aa12.82□□□□□ -0.36
CHRNA1-206ENST00000416004 USP32Q8NFA0 1604 aa12.82□□□□□ -0.36
CHRNA1-206ENST00000416004 SBNO1A3KN83 1393 aa12.82□□□□□ -0.36
CHRNA1-206ENST00000416004 SRPK2P78362 688 aaKnown RBP12.82□□□□□ -0.36
CHRNA1-206ENST00000416004 CDK19Q9BWU1 502 aa12.82□□□□□ -0.36
CHRNA1-206ENST00000416004 PAK3O75914 559 aaPredicted RBP12.8□□□□□ -0.36
CHRNA1-206ENST00000416004 NUDT16Q96DE0 195 aaKnown RBP12.8□□□□□ -0.36
CHRNA1-206ENST00000416004 TESK2Q96S53 571 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms