RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 MYOM2P54296 1465 aa19.97■□□□□ 0.79
CTHRC1-202ENST00000415886 CDC42BPGQ6DT37 1551 aa19.96■□□□□ 0.79
CTHRC1-202ENST00000415886 RRBP1Q9P2E9 1410 aaKnown RBP19.96■□□□□ 0.79
CTHRC1-202ENST00000415886 RPGRIP1LQ68CZ1 1315 aa19.96■□□□□ 0.79
CTHRC1-202ENST00000415886 PXDNQ92626 1479 aa19.94■□□□□ 0.78
CTHRC1-202ENST00000415886 ESCO1Q5FWF5 840 aa19.94■□□□□ 0.78
CTHRC1-202ENST00000415886 NPHP3Q7Z494 1330 aa19.93■□□□□ 0.78
CTHRC1-202ENST00000415886 BCL9LQ86UU0 1499 aa19.92■□□□□ 0.78
CTHRC1-202ENST00000415886 XPCQ01831 940 aaPredicted RBP19.92■□□□□ 0.78
CTHRC1-202ENST00000415886 MARF1Q9Y4F3 1742 aaKnown RBP19.92■□□□□ 0.78
CTHRC1-202ENST00000415886 SLC4A1APQ9BWU0 796 aaKnown RBP19.91■□□□□ 0.78
CTHRC1-202ENST00000415886 FOXO3O43524 673 aa19.9■□□□□ 0.78
CTHRC1-202ENST00000415886 NUTM2FA1L443 756 aa19.89■□□□□ 0.77
CTHRC1-202ENST00000415886 ADGRF5Q8IZF2 1346 aa19.88■□□□□ 0.77
CTHRC1-202ENST00000415886 FOXD1Q16676 465 aa19.87■□□□□ 0.77
CTHRC1-202ENST00000415886 TECPR2O15040 1411 aa19.86■□□□□ 0.77
CTHRC1-202ENST00000415886 WAPLQ7Z5K2 1190 aa19.86■□□□□ 0.77
CTHRC1-202ENST00000415886 STK26Q9P289 416 aa19.86■□□□□ 0.77
CTHRC1-202ENST00000415886 ZRANB1Q9UGI0 708 aa19.86■□□□□ 0.77
CTHRC1-202ENST00000415886 GJD4Q96KN9 370 aaPredicted RBP19.85■□□□□ 0.77
CTHRC1-202ENST00000415886 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.85■□□□□ 0.77
CTHRC1-202ENST00000415886 LRPPRCP42704 1394 aaKnown RBP19.84■□□□□ 0.77
CTHRC1-202ENST00000415886 PLEKHH1Q9ULM0 1364 aa19.84■□□□□ 0.77
CTHRC1-202ENST00000415886 KNDC1Q76NI1 1749 aa19.83■□□□□ 0.77
CTHRC1-202ENST00000415886 IFT172Q9UG01 1749 aa19.83■□□□□ 0.77
CTHRC1-202ENST00000415886 GLI3P10071 1580 aa19.83■□□□□ 0.76
CTHRC1-202ENST00000415886 FMN2Q9NZ56 1722 aa19.82■□□□□ 0.76
CTHRC1-202ENST00000415886 RGL3Q3MIN7 710 aa19.82■□□□□ 0.76
CTHRC1-202ENST00000415886 CCDC144AA2RUR9 1427 aa19.82■□□□□ 0.76
CTHRC1-202ENST00000415886 SLIT2O94813 1529 aa19.81■□□□□ 0.76
CTHRC1-202ENST00000415886 RALGAPBQ86X10 1494 aa19.81■□□□□ 0.76
CTHRC1-202ENST00000415886 TMEM132EQ6IEE7 984 aa19.81■□□□□ 0.76
CTHRC1-202ENST00000415886 CCDC125Q86Z20 511 aa19.81■□□□□ 0.76
CTHRC1-202ENST00000415886 SPATA31E1Q6ZUB1 1445 aa19.81■□□□□ 0.76
CTHRC1-202ENST00000415886 UNC5CLQ8IV45 518 aa19.8■□□□□ 0.76
CTHRC1-202ENST00000415886 KIF1AQ12756 1690 aa19.8■□□□□ 0.76
CTHRC1-202ENST00000415886 ABCC11Q96J66 1382 aa19.8■□□□□ 0.76
CTHRC1-202ENST00000415886 USP32Q8NFA0 1604 aa19.8■□□□□ 0.76
CTHRC1-202ENST00000415886 SPATA31A3Q5VYP0 1347 aa19.79■□□□□ 0.76
CTHRC1-202ENST00000415886 ANKRD30BQ9BXX2 1392 aa19.79■□□□□ 0.76
CTHRC1-202ENST00000415886 PIK3C2GO75747 1445 aa19.78■□□□□ 0.76
CTHRC1-202ENST00000415886 EP400Q96L91 3159 aa19.77■□□□□ 0.76
CTHRC1-202ENST00000415886 YTHDC2Q9H6S0 1430 aaKnown RBP19.76■□□□□ 0.75
CTHRC1-202ENST00000415886 BRWD3Q6RI45 1802 aa19.76■□□□□ 0.75
CTHRC1-202ENST00000415886 BLMP54132 1417 aaPredicted RBP19.76■□□□□ 0.75
CTHRC1-202ENST00000415886 KRT28Q7Z3Y7 464 aa19.75■□□□□ 0.75
CTHRC1-202ENST00000415886 SRCAPQ6ZRS2 3230 aa19.74■□□□□ 0.75
CTHRC1-202ENST00000415886 TNS3Q68CZ2 1445 aa19.74■□□□□ 0.75
CTHRC1-202ENST00000415886 RGPD8O14715 1765 aaPredicted RBP19.73■□□□□ 0.75
CTHRC1-202ENST00000415886 PLCH1Q4KWH8 1693 aa19.73■□□□□ 0.75
CTHRC1-202ENST00000415886 PLEKHG5O94827 1062 aa19.72■□□□□ 0.75
CTHRC1-202ENST00000415886 HAP1P54257 671 aaPredicted RBP19.72■□□□□ 0.75
CTHRC1-202ENST00000415886 DEFB132Q7Z7B7 95 aa19.72■□□□□ 0.75
CTHRC1-202ENST00000415886 CABLES1Q8TDN4 633 aa19.72■□□□□ 0.75
CTHRC1-202ENST00000415886 ABCA3Q99758 1704 aa19.71■□□□□ 0.75
CTHRC1-202ENST00000415886 SEPT12Q8IYM1 358 aa19.71■□□□□ 0.75
CTHRC1-202ENST00000415886 MPHOSPH9Q99550 1183 aa19.7■□□□□ 0.74
CTHRC1-202ENST00000415886 PHF8Q9UPP1 1060 aa19.7■□□□□ 0.74
CTHRC1-202ENST00000415886 NWD2Q9ULI1 1742 aa19.69■□□□□ 0.74
CTHRC1-202ENST00000415886 VPS72Q15906 364 aa19.69■□□□□ 0.74
CTHRC1-202ENST00000415886 NRXN1Q9ULB1 1477 aa19.68■□□□□ 0.74
CTHRC1-202ENST00000415886 PSME1Q06323 249 aa19.67■□□□□ 0.74
CTHRC1-202ENST00000415886 SF3B2Q13435 895 aaKnown RBP19.67■□□□□ 0.74
CTHRC1-202ENST00000415886 LMOD2Q6P5Q4 547 aa19.67■□□□□ 0.74
CTHRC1-202ENST00000415886 SIRT1Q96EB6 747 aa19.67■□□□□ 0.74
CTHRC1-202ENST00000415886 CCDC9Q9Y3X0 531 aaKnown RBP19.67■□□□□ 0.74
CTHRC1-202ENST00000415886 SAFB2Q14151 953 aaKnown RBP eCLIP19.66■□□□□ 0.74
CTHRC1-202ENST00000415886 C14orf93Q9H972 538 aaKnown RBP19.66■□□□□ 0.74
CTHRC1-202ENST00000415886 SBNO1A3KN83 1393 aa19.66■□□□□ 0.74
CTHRC1-202ENST00000415886 CFAP70Q5T0N1 1121 aa19.65■□□□□ 0.74
CTHRC1-202ENST00000415886 PRAM1Q96QH2 718 aa19.64■□□□□ 0.73
CTHRC1-202ENST00000415886 ARHGEF10O15013 1369 aa19.64■□□□□ 0.73
CTHRC1-202ENST00000415886 DHX57Q6P158 1386 aaKnown RBP19.64■□□□□ 0.73
CTHRC1-202ENST00000415886 ONECUT3O60422 494 aaPredicted RBP19.63■□□□□ 0.73
CTHRC1-202ENST00000415886 KRT27Q7Z3Y8 459 aa19.63■□□□□ 0.73
CTHRC1-202ENST00000415886 NRAPQ86VF7 1730 aa19.62■□□□□ 0.73
CTHRC1-202ENST00000415886 PMFBP1Q8TBY8 1022 aa19.62■□□□□ 0.73
CTHRC1-202ENST00000415886 FAM83GA6ND36 823 aa19.61■□□□□ 0.73
CTHRC1-202ENST00000415886 LRP5O75197 1615 aa19.61■□□□□ 0.73
CTHRC1-202ENST00000415886 ANKARQ7Z5J8 1434 aa19.6■□□□□ 0.73
CTHRC1-202ENST00000415886 TRPM3Q9HCF6 1732 aaPredicted RBP19.6■□□□□ 0.73
CTHRC1-202ENST00000415886 A0A0G2JS52 829 aa19.6■□□□□ 0.73
CTHRC1-202ENST00000415886 MYT1Q01538 1121 aa19.6■□□□□ 0.73
CTHRC1-202ENST00000415886 DLC1Q96QB1 1528 aa19.6■□□□□ 0.73
CTHRC1-202ENST00000415886 ADGRB2O60241 1585 aa19.59■□□□□ 0.73
CTHRC1-202ENST00000415886 POGKQ9P215 609 aa19.58■□□□□ 0.72
CTHRC1-202ENST00000415886 FAM98CQ17RN3 349 aaKnown RBP19.57■□□□□ 0.72
CTHRC1-202ENST00000415886 ALS2Q96Q42 1657 aa19.56■□□□□ 0.72
CTHRC1-202ENST00000415886 PSDA5PKW4 1024 aaPredicted RBP19.56■□□□□ 0.72
CTHRC1-202ENST00000415886 BAG6P46379 1132 aa19.56■□□□□ 0.72
CTHRC1-202ENST00000415886 BTG4Q9NY30 223 aa19.56■□□□□ 0.72
CTHRC1-202ENST00000415886 COL14A1Q05707 1796 aaKnown RBP19.55■□□□□ 0.72
CTHRC1-202ENST00000415886 ADGRB1O14514 1584 aa19.55■□□□□ 0.72
CTHRC1-202ENST00000415886 HIRIP3Q9BW71 556 aaPredicted RBP19.55■□□□□ 0.72
CTHRC1-202ENST00000415886 PRR36Q9H6K5 1346 aa19.53■□□□□ 0.72
CTHRC1-202ENST00000415886 GPRASP1Q5JY77 1395 aa19.53■□□□□ 0.72
CTHRC1-202ENST00000415886 TULP4Q9NRJ4 1543 aa19.52■□□□□ 0.72
CTHRC1-202ENST00000415886 CRYBG1Q9Y4K1 1723 aa19.52■□□□□ 0.72
CTHRC1-202ENST00000415886 FAM182BQ5T319 152 aa19.52■□□□□ 0.72
CTHRC1-202ENST00000415886 TRAK1Q9UPV9 953 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms