RNA–Protein interactions for RNA: ENST00000415597.5

LMCD1-203, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 5

Gene LMCD1, Length 870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-203ENST00000415597 TMEM132EQ6IEE7 984 aa15.83■□□□□ 0.12
LMCD1-203ENST00000415597 ABCC11Q96J66 1382 aa15.83■□□□□ 0.12
LMCD1-203ENST00000415597 PPLO60437 1756 aa15.82■□□□□ 0.12
LMCD1-203ENST00000415597 WAPLQ7Z5K2 1190 aa15.82■□□□□ 0.12
LMCD1-203ENST00000415597 SPATA31E1Q6ZUB1 1445 aa15.82■□□□□ 0.12
LMCD1-203ENST00000415597 NHSL1Q5SYE7 1610 aa15.81■□□□□ 0.12
LMCD1-203ENST00000415597 DHX57Q6P158 1386 aaKnown RBP15.81■□□□□ 0.12
LMCD1-203ENST00000415597 NALCNQ8IZF0 1738 aa15.81■□□□□ 0.12
LMCD1-203ENST00000415597 SIRT1Q96EB6 747 aa15.81■□□□□ 0.12
LMCD1-203ENST00000415597 NUTM2FA1L443 756 aa15.8■□□□□ 0.12
LMCD1-203ENST00000415597 FOXO3O43524 673 aa15.8■□□□□ 0.12
LMCD1-203ENST00000415597 C14orf93Q9H972 538 aaKnown RBP15.8■□□□□ 0.12
LMCD1-203ENST00000415597 USP21Q9UK80 565 aa15.79■□□□□ 0.12
LMCD1-203ENST00000415597 POGKQ9P215 609 aa15.78■□□□□ 0.12
LMCD1-203ENST00000415597 TRPC5Q9UL62 973 aaPredicted RBP15.78■□□□□ 0.12
LMCD1-203ENST00000415597 TECPR2O15040 1411 aa15.77■□□□□ 0.12
LMCD1-203ENST00000415597 PSME1Q06323 249 aa15.77■□□□□ 0.12
LMCD1-203ENST00000415597 UPF1Q92900 1129 aaKnown RBP eCLIP15.77■□□□□ 0.12
LMCD1-203ENST00000415597 STAC3Q96MF2 364 aa15.77■□□□□ 0.12
LMCD1-203ENST00000415597 CDK12Q9NYV4 1490 aaPredicted RBP15.77■□□□□ 0.11
LMCD1-203ENST00000415597 SETD1AO15047 1707 aaKnown RBP15.77■□□□□ 0.11
LMCD1-203ENST00000415597 PIK3C2GO75747 1445 aa15.77■□□□□ 0.11
LMCD1-203ENST00000415597 YTHDC2Q9H6S0 1430 aaKnown RBP15.77■□□□□ 0.11
LMCD1-203ENST00000415597 RAB3GAP2Q9H2M9 1393 aa15.76■□□□□ 0.11
LMCD1-203ENST00000415597 HAP1P54257 671 aaPredicted RBP15.76■□□□□ 0.11
LMCD1-203ENST00000415597 CFAP70Q5T0N1 1121 aa15.76■□□□□ 0.11
LMCD1-203ENST00000415597 CDC42BPGQ6DT37 1551 aa15.75■□□□□ 0.11
LMCD1-203ENST00000415597 HRCP23327 699 aa15.74■□□□□ 0.11
LMCD1-203ENST00000415597 XPCQ01831 940 aaPredicted RBP15.74■□□□□ 0.11
LMCD1-203ENST00000415597 KRT28Q7Z3Y7 464 aa15.73■□□□□ 0.11
LMCD1-203ENST00000415597 FNBP4Q8N3X1 1017 aaPredicted RBP15.73■□□□□ 0.11
LMCD1-203ENST00000415597 KDM2AQ9Y2K7 1162 aa15.73■□□□□ 0.11
LMCD1-203ENST00000415597 SAFB2Q14151 953 aaKnown RBP eCLIP15.72■□□□□ 0.11
LMCD1-203ENST00000415597 PRAM1Q96QH2 718 aa15.72■□□□□ 0.11
LMCD1-203ENST00000415597 PHF8Q9UPP1 1060 aa15.72■□□□□ 0.11
LMCD1-203ENST00000415597 PLEKHH1Q9ULM0 1364 aa15.72■□□□□ 0.11
LMCD1-203ENST00000415597 DCAF11Q8TEB1 546 aa15.71■□□□□ 0.11
LMCD1-203ENST00000415597 LAMC1P11047 1609 aa15.71■□□□□ 0.11
LMCD1-203ENST00000415597 LMOD2Q6P5Q4 547 aa15.7■□□□□ 0.1
LMCD1-203ENST00000415597 MYOM2P54296 1465 aa15.7■□□□□ 0.1
LMCD1-203ENST00000415597 SPATA31A3Q5VYP0 1347 aa15.68■□□□□ 0.1
LMCD1-203ENST00000415597 TRAK1Q9UPV9 953 aa15.68■□□□□ 0.1
LMCD1-203ENST00000415597 IFT172Q9UG01 1749 aa15.68■□□□□ 0.1
LMCD1-203ENST00000415597 EIF3AQ14152 1382 aaKnown RBP15.67■□□□□ 0.1
LMCD1-203ENST00000415597 ATAD2Q6PL18 1390 aa15.67■□□□□ 0.1
LMCD1-203ENST00000415597 PXDNQ92626 1479 aa15.66■□□□□ 0.1
LMCD1-203ENST00000415597 NRXN1Q9ULB1 1477 aa15.66■□□□□ 0.1
LMCD1-203ENST00000415597 KNDC1Q76NI1 1749 aa15.66■□□□□ 0.1
LMCD1-203ENST00000415597 RGS12O14924 1447 aa15.66■□□□□ 0.1
LMCD1-203ENST00000415597 UNC5CLQ8IV45 518 aa15.65■□□□□ 0.1
LMCD1-203ENST00000415597 GJD4Q96KN9 370 aaPredicted RBP15.65■□□□□ 0.1
LMCD1-203ENST00000415597 GPRASP1Q5JY77 1395 aa15.64■□□□□ 0.09
LMCD1-203ENST00000415597 COL22A1Q8NFW1 1626 aaPredicted RBP15.64■□□□□ 0.09
LMCD1-203ENST00000415597 KIF1AQ12756 1690 aa15.63■□□□□ 0.09
LMCD1-203ENST00000415597 ARHGEF10O15013 1369 aa15.63■□□□□ 0.09
LMCD1-203ENST00000415597 ATRNO75882 1429 aa15.63■□□□□ 0.09
LMCD1-203ENST00000415597 PLEKHG5O94827 1062 aa15.63■□□□□ 0.09
LMCD1-203ENST00000415597 CCDC125Q86Z20 511 aa15.63■□□□□ 0.09
LMCD1-203ENST00000415597 PMFBP1Q8TBY8 1022 aa15.63■□□□□ 0.09
LMCD1-203ENST00000415597 MINK1Q8N4C8 1332 aaPredicted RBP15.63■□□□□ 0.09
LMCD1-203ENST00000415597 SBNO1A3KN83 1393 aa15.62■□□□□ 0.09
LMCD1-203ENST00000415597 ANKARQ7Z5J8 1434 aa15.62■□□□□ 0.09
LMCD1-203ENST00000415597 NGDNQ8NEJ9 315 aaKnown RBP15.62■□□□□ 0.09
LMCD1-203ENST00000415597 HIRIP3Q9BW71 556 aaPredicted RBP15.62■□□□□ 0.09
LMCD1-203ENST00000415597 CCDC9Q9Y3X0 531 aaKnown RBP15.62■□□□□ 0.09
LMCD1-203ENST00000415597 DLC1Q96QB1 1528 aa15.62■□□□□ 0.09
LMCD1-203ENST00000415597 TNS3Q68CZ2 1445 aa15.61■□□□□ 0.09
LMCD1-203ENST00000415597 FMN2Q9NZ56 1722 aa15.61■□□□□ 0.09
LMCD1-203ENST00000415597 WASLO00401 505 aaPredicted RBP15.6■□□□□ 0.09
LMCD1-203ENST00000415597 BCL9LQ86UU0 1499 aa15.59■□□□□ 0.09
LMCD1-203ENST00000415597 CABLES1Q8TDN4 633 aa15.59■□□□□ 0.09
LMCD1-203ENST00000415597 PAK3O75914 559 aaPredicted RBP15.58■□□□□ 0.08
LMCD1-203ENST00000415597 SF3B2Q13435 895 aaKnown RBP15.57■□□□□ 0.08
LMCD1-203ENST00000415597 A0A0G2JS52 829 aa15.56■□□□□ 0.08
LMCD1-203ENST00000415597 MYT1Q01538 1121 aa15.56■□□□□ 0.08
LMCD1-203ENST00000415597 VPS72Q15906 364 aa15.56■□□□□ 0.08
LMCD1-203ENST00000415597 ZRANB1Q9UGI0 708 aa15.55■□□□□ 0.08
LMCD1-203ENST00000415597 SLIT2O94813 1529 aa15.54■□□□□ 0.08
LMCD1-203ENST00000415597 ADGRB1O14514 1584 aa15.53■□□□□ 0.08
LMCD1-203ENST00000415597 NUDT16Q96DE0 195 aaKnown RBP15.53■□□□□ 0.08
LMCD1-203ENST00000415597 MARF1Q9Y4F3 1742 aaKnown RBP15.52■□□□□ 0.08
LMCD1-203ENST00000415597 FAM83GA6ND36 823 aa15.52■□□□□ 0.08
LMCD1-203ENST00000415597 SEPT12Q8IYM1 358 aa15.52■□□□□ 0.08
LMCD1-203ENST00000415597 CDK19Q9BWU1 502 aa15.52■□□□□ 0.08
LMCD1-203ENST00000415597 RALGAPBQ86X10 1494 aa15.52■□□□□ 0.07
LMCD1-203ENST00000415597 ADGRB2O60241 1585 aa15.51■□□□□ 0.07
LMCD1-203ENST00000415597 BTG4Q9NY30 223 aa15.51■□□□□ 0.07
LMCD1-203ENST00000415597 TULP4Q9NRJ4 1543 aa15.51■□□□□ 0.07
LMCD1-203ENST00000415597 USP32Q8NFA0 1604 aa15.5■□□□□ 0.07
LMCD1-203ENST00000415597 PRR36Q9H6K5 1346 aa15.5■□□□□ 0.07
LMCD1-203ENST00000415597 RGPD8O14715 1765 aaPredicted RBP15.5■□□□□ 0.07
LMCD1-203ENST00000415597 PRDM11Q9NQV5 511 aa15.5■□□□□ 0.07
LMCD1-203ENST00000415597 CCDC61Q9Y6R9 512 aa15.5■□□□□ 0.07
LMCD1-203ENST00000415597 KRT27Q7Z3Y8 459 aa15.49■□□□□ 0.07
LMCD1-203ENST00000415597 ONECUT3O60422 494 aaPredicted RBP15.48■□□□□ 0.07
LMCD1-203ENST00000415597 SRPK2P78362 688 aaKnown RBP15.48■□□□□ 0.07
LMCD1-203ENST00000415597 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.47■□□□□ 0.07
LMCD1-203ENST00000415597 BLMP54132 1417 aaPredicted RBP15.46■□□□□ 0.07
LMCD1-203ENST00000415597 EVA1CP58658 441 aa15.45■□□□□ 0.06
LMCD1-203ENST00000415597 FAM98CQ17RN3 349 aaKnown RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms