RNA–Protein interactions for RNA: ENST00000415469.5

LINC00858-201, long intergenic non-protein coding RNA 858, humanhuman

TSL 2 BASIC

Gene LINC00858, Length 2,685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00858-201ENST00000415469 DUSP27Q5VZP5 1158 aa12.34□□□□□ -0.43
LINC00858-201ENST00000415469 STAG3Q9UJ98 1225 aa12.33□□□□□ -0.44
LINC00858-201ENST00000415469 NPC1L1Q9UHC9 1359 aa12.33□□□□□ -0.44
LINC00858-201ENST00000415469 SRPK2P78362 688 aaKnown RBP12.32□□□□□ -0.44
LINC00858-201ENST00000415469 ZNF521Q96K83 1311 aa12.32□□□□□ -0.44
LINC00858-201ENST00000415469 GOLGA2Q08379 1002 aa12.32□□□□□ -0.44
LINC00858-201ENST00000415469 TMEM131LA2VDJ0 1609 aa12.32□□□□□ -0.44
LINC00858-201ENST00000415469 PRAM1Q96QH2 718 aa12.31□□□□□ -0.44
LINC00858-201ENST00000415469 ANP32EQ9BTT0 268 aa12.31□□□□□ -0.44
LINC00858-201ENST00000415469 ARHGAP31Q2M1Z3 1444 aa12.31□□□□□ -0.44
LINC00858-201ENST00000415469 EVC2Q86UK5 1308 aa12.3□□□□□ -0.44
LINC00858-201ENST00000415469 CLTCQ00610 1675 aaKnown RBP12.3□□□□□ -0.44
LINC00858-201ENST00000415469 SLC52A1Q9NWF4 448 aa12.3□□□□□ -0.44
LINC00858-201ENST00000415469 INSRP06213 1382 aa12.3□□□□□ -0.44
LINC00858-201ENST00000415469 MTHFSP49914 203 aa12.29□□□□□ -0.44
LINC00858-201ENST00000415469 SLFN5Q08AF3 891 aa12.29□□□□□ -0.44
LINC00858-201ENST00000415469 GGNBP2Q9H3C7 697 aa12.28□□□□□ -0.44
LINC00858-201ENST00000415469 POGKQ9P215 609 aa12.28□□□□□ -0.44
LINC00858-201ENST00000415469 SHPRHQ149N8 1683 aa12.28□□□□□ -0.44
LINC00858-201ENST00000415469 SLC24A1O60721 1099 aa12.28□□□□□ -0.44
LINC00858-201ENST00000415469 BCAR3O75815 825 aa12.28□□□□□ -0.44
LINC00858-201ENST00000415469 A0A1W2PP64 1363 aa12.27□□□□□ -0.44
LINC00858-201ENST00000415469 CGNL1Q0VF96 1302 aa12.27□□□□□ -0.45
LINC00858-201ENST00000415469 FANCIQ9NVI1 1328 aa12.27□□□□□ -0.45
LINC00858-201ENST00000415469 WAPLQ7Z5K2 1190 aa12.27□□□□□ -0.45
LINC00858-201ENST00000415469 PTPRMP28827 1452 aa12.27□□□□□ -0.45
LINC00858-201ENST00000415469 YTHDC2Q9H6S0 1430 aaKnown RBP12.26□□□□□ -0.45
LINC00858-201ENST00000415469 FBLN1P23142 703 aa12.25□□□□□ -0.45
LINC00858-201ENST00000415469 PLPPR3Q6T4P5 718 aa12.25□□□□□ -0.45
LINC00858-201ENST00000415469 POLR3AO14802 1390 aaPredicted RBP12.25□□□□□ -0.45
LINC00858-201ENST00000415469 ANKRD36BQ8N2N9 1353 aa12.25□□□□□ -0.45
LINC00858-201ENST00000415469 ALKQ9UM73 1620 aa12.24□□□□□ -0.45
LINC00858-201ENST00000415469 NPM2Q86SE8 214 aaKnown RBP12.24□□□□□ -0.45
LINC00858-201ENST00000415469 WWC1Q8IX03 1113 aa12.24□□□□□ -0.45
LINC00858-201ENST00000415469 TCP11L2Q8N4U5 519 aa12.23□□□□□ -0.45
LINC00858-201ENST00000415469 U2AF1L5P0DN76 240 aaPredicted RBP12.23□□□□□ -0.45
LINC00858-201ENST00000415469 U2AF1Q01081 240 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC00858-201ENST00000415469 CDK19Q9BWU1 502 aa12.23□□□□□ -0.45
LINC00858-201ENST00000415469 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC00858-201ENST00000415469 U2SURPO15042 1029 aaKnown RBP12.22□□□□□ -0.45
LINC00858-201ENST00000415469 TRMT2AQ8IZ69 625 aaKnown RBP12.22□□□□□ -0.45
LINC00858-201ENST00000415469 BCL2L13Q9BXK5 485 aa12.22□□□□□ -0.45
LINC00858-201ENST00000415469 CABP1Q9NZU7 370 aa12.22□□□□□ -0.45
LINC00858-201ENST00000415469 NKTRP30414 1462 aaKnown RBP12.22□□□□□ -0.45
LINC00858-201ENST00000415469 ZFYVE9O95405 1425 aa12.21□□□□□ -0.45
LINC00858-201ENST00000415469 ERICH6Q7L0X2 663 aa12.21□□□□□ -0.45
LINC00858-201ENST00000415469 A2ML1A8K2U0 1454 aa12.21□□□□□ -0.46
LINC00858-201ENST00000415469 KIF13AQ9H1H9 1805 aa12.21□□□□□ -0.46
LINC00858-201ENST00000415469 NCKAP5LQ9HCH0 1330 aa12.2□□□□□ -0.46
LINC00858-201ENST00000415469 E9PSI1 815 aa12.2□□□□□ -0.46
LINC00858-201ENST00000415469 RUNDC1Q96C34 613 aa12.2□□□□□ -0.46
LINC00858-201ENST00000415469 RIMS2Q9UQ26 1411 aa12.2□□□□□ -0.46
LINC00858-201ENST00000415469 CD163L1Q9NR16 1453 aa12.2□□□□□ -0.46
LINC00858-201ENST00000415469 USP32Q8NFA0 1604 aa12.2□□□□□ -0.46
LINC00858-201ENST00000415469 PAK3O75914 559 aaPredicted RBP12.2□□□□□ -0.46
LINC00858-201ENST00000415469 TNNQ9UQP3 1299 aa12.2□□□□□ -0.46
LINC00858-201ENST00000415469 FYB1O15117 783 aa12.19□□□□□ -0.46
LINC00858-201ENST00000415469 FRAT1Q92837 279 aaPredicted RBP12.19□□□□□ -0.46
LINC00858-201ENST00000415469 CFAP53Q96M91 514 aa12.19□□□□□ -0.46
LINC00858-201ENST00000415469 PPM1GO15355 546 aaPredicted RBP12.19□□□□□ -0.46
LINC00858-201ENST00000415469 IQSEC2Q5JU85 1478 aa12.19□□□□□ -0.46
LINC00858-201ENST00000415469 ABCC11Q96J66 1382 aa12.19□□□□□ -0.46
LINC00858-201ENST00000415469 TXNDC2Q86VQ3 553 aa12.18□□□□□ -0.46
LINC00858-201ENST00000415469 PANK1Q8TE04 598 aa12.18□□□□□ -0.46
LINC00858-201ENST00000415469 ESF1Q9H501 851 aaKnown RBP12.18□□□□□ -0.46
LINC00858-201ENST00000415469 METP08581 1390 aa12.17□□□□□ -0.46
LINC00858-201ENST00000415469 CANXP27824 592 aaKnown RBP12.17□□□□□ -0.46
LINC00858-201ENST00000415469 ARHGEF40Q8TER5 1519 aa12.17□□□□□ -0.46
LINC00858-201ENST00000415469 SPATA31D1Q6ZQQ2 1576 aa12.17□□□□□ -0.46
LINC00858-201ENST00000415469 PDE4AP27815 886 aa12.16□□□□□ -0.46
LINC00858-201ENST00000415469 TSR2Q969E8 191 aaKnown RBP12.16□□□□□ -0.46
LINC00858-201ENST00000415469 ZRANB1Q9UGI0 708 aa12.16□□□□□ -0.46
LINC00858-201ENST00000415469 AGLP35573 1532 aa12.16□□□□□ -0.46
LINC00858-201ENST00000415469 TERF2IPQ9NYB0 399 aa12.16□□□□□ -0.46
LINC00858-201ENST00000415469 COG6Q9Y2V7 657 aa12.16□□□□□ -0.46
LINC00858-201ENST00000415469 ZMYM3Q14202 1370 aa12.16□□□□□ -0.46
LINC00858-201ENST00000415469 NUTM2FA1L443 756 aa12.15□□□□□ -0.46
LINC00858-201ENST00000415469 CEBPAP49715 358 aaPredicted RBP12.15□□□□□ -0.46
LINC00858-201ENST00000415469 ATAD2Q6PL18 1390 aa12.15□□□□□ -0.46
LINC00858-201ENST00000415469 KDM2BQ8NHM5 1336 aa12.15□□□□□ -0.46
LINC00858-201ENST00000415469 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.15□□□□□ -0.46
LINC00858-201ENST00000415469 REREQ9P2R6 1566 aa12.15□□□□□ -0.46
LINC00858-201ENST00000415469 NLRP1Q9C000 1473 aa12.15□□□□□ -0.47
LINC00858-201ENST00000415469 TCERG1O14776 1098 aaKnown RBP12.14□□□□□ -0.47
LINC00858-201ENST00000415469 RGS3P49796 1198 aa12.14□□□□□ -0.47
LINC00858-201ENST00000415469 HDGFL2Q7Z4V5 671 aaPredicted RBP12.14□□□□□ -0.47
LINC00858-201ENST00000415469 SETD1AO15047 1707 aaKnown RBP12.14□□□□□ -0.47
LINC00858-201ENST00000415469 CLUAP1Q96AJ1 413 aa12.14□□□□□ -0.47
LINC00858-201ENST00000415469 NRXN3Q9Y4C0 1643 aa12.14□□□□□ -0.47
LINC00858-201ENST00000415469 NSD2O96028 1365 aa12.14□□□□□ -0.47
LINC00858-201ENST00000415469 ANP32AP39687 249 aaKnown RBP12.14□□□□□ -0.47
LINC00858-201ENST00000415469 PUS7Q96PZ0 661 aaKnown RBP12.14□□□□□ -0.47
LINC00858-201ENST00000415469 NOP58Q9Y2X3 529 aaKnown RBP12.13□□□□□ -0.47
LINC00858-201ENST00000415469 COL3A1P02461 1466 aaPredicted RBP12.12□□□□□ -0.47
LINC00858-201ENST00000415469 RLBP1P12271 317 aa12.12□□□□□ -0.47
LINC00858-201ENST00000415469 NME9Q86XW9 330 aa12.12□□□□□ -0.47
LINC00858-201ENST00000415469 IGHDP01880 384 aa12.12□□□□□ -0.47
LINC00858-201ENST00000415469 RARSP54136 660 aaKnown RBP12.12□□□□□ -0.47
LINC00858-201ENST00000415469 BACH2Q9BYV9 841 aa12.12□□□□□ -0.47
LINC00858-201ENST00000415469 KIF20BQ96Q89 1820 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms