RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 SLC24A1O60721 1099 aa18.69■□□□□ 0.58
CNN3-203ENST00000415017 LRRC7Q96NW7 1537 aa18.68■□□□□ 0.58
CNN3-203ENST00000415017 ZNF335Q9H4Z2 1342 aaPredicted RBP18.67■□□□□ 0.58
CNN3-203ENST00000415017 C11orf95C9JLR9 678 aaPredicted RBP18.66■□□□□ 0.58
CNN3-203ENST00000415017 PUS7Q96PZ0 661 aaKnown RBP18.66■□□□□ 0.58
CNN3-203ENST00000415017 HIRIP3Q9BW71 556 aaPredicted RBP18.66■□□□□ 0.58
CNN3-203ENST00000415017 CDC42BPGQ6DT37 1551 aa18.66■□□□□ 0.58
CNN3-203ENST00000415017 POGKQ9P215 609 aa18.65■□□□□ 0.58
CNN3-203ENST00000415017 DISP3Q9P2K9 1392 aa18.65■□□□□ 0.58
CNN3-203ENST00000415017 ADGRL3Q9HAR2 1447 aa18.65■□□□□ 0.58
CNN3-203ENST00000415017 FMN2Q9NZ56 1722 aa18.63■□□□□ 0.57
CNN3-203ENST00000415017 ZNF316A6NFI3 1004 aaPredicted RBP18.63■□□□□ 0.57
CNN3-203ENST00000415017 MYOM1P52179 1685 aa18.61■□□□□ 0.57
CNN3-203ENST00000415017 USP32Q8NFA0 1604 aa18.61■□□□□ 0.57
CNN3-203ENST00000415017 TMEM94Q12767 1356 aa18.61■□□□□ 0.57
CNN3-203ENST00000415017 TMF1P82094 1093 aa18.61■□□□□ 0.57
CNN3-203ENST00000415017 DCCP43146 1447 aa18.6■□□□□ 0.57
CNN3-203ENST00000415017 CCDC7Q96M83 1385 aa18.6■□□□□ 0.57
CNN3-203ENST00000415017 WASHC2AQ641Q2 1341 aa18.6■□□□□ 0.57
CNN3-203ENST00000415017 PROSER2Q86WR7 435 aaPredicted RBP18.6■□□□□ 0.57
CNN3-203ENST00000415017 TOPAZ1Q8N9V7 1692 aa18.6■□□□□ 0.57
CNN3-203ENST00000415017 KIF7Q2M1P5 1343 aa18.59■□□□□ 0.57
CNN3-203ENST00000415017 MINK1Q8N4C8 1332 aaPredicted RBP18.59■□□□□ 0.57
CNN3-203ENST00000415017 WASLO00401 505 aaPredicted RBP18.59■□□□□ 0.57
CNN3-203ENST00000415017 SAFB2Q14151 953 aaKnown RBP eCLIP18.59■□□□□ 0.57
CNN3-203ENST00000415017 EVC2Q86UK5 1308 aa18.58■□□□□ 0.57
CNN3-203ENST00000415017 RGPD8O14715 1765 aaPredicted RBP18.58■□□□□ 0.56
CNN3-203ENST00000415017 CDCA8Q53HL2 280 aa18.56■□□□□ 0.56
CNN3-203ENST00000415017 CDK19Q9BWU1 502 aa18.56■□□□□ 0.56
CNN3-203ENST00000415017 C19orf44Q9H6X5 657 aa18.56■□□□□ 0.56
CNN3-203ENST00000415017 ATP7BP35670 1465 aa18.56■□□□□ 0.56
CNN3-203ENST00000415017 ITSN1Q15811 1721 aa18.55■□□□□ 0.56
CNN3-203ENST00000415017 ANKARQ7Z5J8 1434 aa18.55■□□□□ 0.56
CNN3-203ENST00000415017 ILDR1Q86SU0 546 aaPredicted RBP18.53■□□□□ 0.56
CNN3-203ENST00000415017 RBM33Q96EV2 1170 aaKnown RBP18.53■□□□□ 0.56
CNN3-203ENST00000415017 IQSEC2Q5JU85 1478 aa18.52■□□□□ 0.56
CNN3-203ENST00000415017 PRR36Q9H6K5 1346 aa18.52■□□□□ 0.56
CNN3-203ENST00000415017 ATAD2Q6PL18 1390 aa18.51■□□□□ 0.55
CNN3-203ENST00000415017 CABP2Q9NPB3 220 aa18.5■□□□□ 0.55
CNN3-203ENST00000415017 NINLQ9Y2I6 1382 aa18.5■□□□□ 0.55
CNN3-203ENST00000415017 MST1RQ04912 1400 aa18.49■□□□□ 0.55
CNN3-203ENST00000415017 MSH6P52701 1360 aa18.49■□□□□ 0.55
CNN3-203ENST00000415017 CD163L1Q9NR16 1453 aa18.49■□□□□ 0.55
CNN3-203ENST00000415017 AKAP12Q02952 1782 aa18.49■□□□□ 0.55
CNN3-203ENST00000415017 NUDT16Q96DE0 195 aaKnown RBP18.48■□□□□ 0.55
CNN3-203ENST00000415017 C1orf167Q5SNV9 1468 aa18.46■□□□□ 0.55
CNN3-203ENST00000415017 PLEKHG3A1L390 1219 aa18.46■□□□□ 0.55
CNN3-203ENST00000415017 SRPK2P78362 688 aaKnown RBP18.46■□□□□ 0.55
CNN3-203ENST00000415017 CADPS2Q86UW7 1296 aa18.46■□□□□ 0.55
CNN3-203ENST00000415017 CCDC61Q9Y6R9 512 aa18.46■□□□□ 0.55
CNN3-203ENST00000415017 MON2Q7Z3U7 1717 aa18.46■□□□□ 0.55
CNN3-203ENST00000415017 CPSF1Q10570 1443 aaKnown RBP18.45■□□□□ 0.54
CNN3-203ENST00000415017 KIF1AQ12756 1690 aa18.44■□□□□ 0.54
CNN3-203ENST00000415017 POLR3AO14802 1390 aaPredicted RBP18.43■□□□□ 0.54
CNN3-203ENST00000415017 PPIP5K1Q6PFW1 1433 aa18.43■□□□□ 0.54
CNN3-203ENST00000415017 C14orf37Q86TY3 774 aa18.43■□□□□ 0.54
CNN3-203ENST00000415017 ATF3P18847 181 aa18.42■□□□□ 0.54
CNN3-203ENST00000415017 SLC12A5Q9H2X9 1139 aa18.42■□□□□ 0.54
CNN3-203ENST00000415017 CABP1Q9NZU7 370 aa18.41■□□□□ 0.54
CNN3-203ENST00000415017 NRKQ7Z2Y5 1582 aa18.41■□□□□ 0.54
CNN3-203ENST00000415017 ANKRD36BQ8N2N9 1353 aa18.41■□□□□ 0.54
CNN3-203ENST00000415017 PER1O15534 1290 aaPredicted RBP18.4■□□□□ 0.54
CNN3-203ENST00000415017 SSH2Q76I76 1423 aa18.39■□□□□ 0.53
CNN3-203ENST00000415017 SLAIN2Q9P270 581 aa18.38■□□□□ 0.53
CNN3-203ENST00000415017 A0A1W2PP64 1363 aa18.38■□□□□ 0.53
CNN3-203ENST00000415017 DDX10Q13206 875 aaKnown RBP18.37■□□□□ 0.53
CNN3-203ENST00000415017 CERKQ8TCT0 537 aa18.37■□□□□ 0.53
CNN3-203ENST00000415017 NHSL1Q5SYE7 1610 aa18.37■□□□□ 0.53
CNN3-203ENST00000415017 NUTM2FA1L443 756 aa18.36■□□□□ 0.53
CNN3-203ENST00000415017 ORAI2Q96SN7 254 aa18.36■□□□□ 0.53
CNN3-203ENST00000415017 CARD14Q9BXL6 1004 aa18.36■□□□□ 0.53
CNN3-203ENST00000415017 PANK3Q9H999 370 aa18.36■□□□□ 0.53
CNN3-203ENST00000415017 TRPM3Q9HCF6 1732 aaPredicted RBP18.36■□□□□ 0.53
CNN3-203ENST00000415017 BRD4O60885 1362 aaPredicted RBP18.35■□□□□ 0.53
CNN3-203ENST00000415017 ACEP12821 1306 aa18.35■□□□□ 0.53
CNN3-203ENST00000415017 ZNF692Q9BU19 519 aaPredicted RBP18.35■□□□□ 0.53
CNN3-203ENST00000415017 PHF8Q9UPP1 1060 aa18.35■□□□□ 0.53
CNN3-203ENST00000415017 TMC1Q8TDI8 760 aa18.34■□□□□ 0.53
CNN3-203ENST00000415017 TERF2IPQ9NYB0 399 aa18.34■□□□□ 0.53
CNN3-203ENST00000415017 USP54Q70EL1 1684 aa18.34■□□□□ 0.53
CNN3-203ENST00000415017 USP6P35125 1406 aa18.33■□□□□ 0.53
CNN3-203ENST00000415017 BRINP3Q76B58 766 aa18.33■□□□□ 0.52
CNN3-203ENST00000415017 POLR3GLQ9BT43 218 aa18.33■□□□□ 0.52
CNN3-203ENST00000415017 ROBO1Q9Y6N7 1651 aa18.33■□□□□ 0.52
CNN3-203ENST00000415017 EDC4Q6P2E9 1401 aaKnown RBP18.32■□□□□ 0.52
CNN3-203ENST00000415017 ANKRD26Q9UPS8 1709 aa18.32■□□□□ 0.52
CNN3-203ENST00000415017 NPC1L1Q9UHC9 1359 aa18.32■□□□□ 0.52
CNN3-203ENST00000415017 ESCO1Q5FWF5 840 aa18.32■□□□□ 0.52
CNN3-203ENST00000415017 KIF20BQ96Q89 1820 aa18.32■□□□□ 0.52
CNN3-203ENST00000415017 PMFBP1Q8TBY8 1022 aa18.31■□□□□ 0.52
CNN3-203ENST00000415017 PXDNQ92626 1479 aa18.31■□□□□ 0.52
CNN3-203ENST00000415017 AHDC1Q5TGY3 1603 aaPredicted RBP18.31■□□□□ 0.52
CNN3-203ENST00000415017 KTN1Q86UP2 1357 aaKnown RBP18.3■□□□□ 0.52
CNN3-203ENST00000415017 MARF1Q9Y4F3 1742 aaKnown RBP18.3■□□□□ 0.52
CNN3-203ENST00000415017 HDGFL2Q7Z4V5 671 aaPredicted RBP18.3■□□□□ 0.52
CNN3-203ENST00000415017 ALS2Q96Q42 1657 aa18.3■□□□□ 0.52
CNN3-203ENST00000415017 AMER1Q5JTC6 1135 aaPredicted RBP18.29■□□□□ 0.52
CNN3-203ENST00000415017 NSD3Q9BZ95 1437 aa18.29■□□□□ 0.52
CNN3-203ENST00000415017 PIK3C2AO00443 1686 aa18.28■□□□□ 0.52
CNN3-203ENST00000415017 TOM1O60784 492 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms