RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 PLEKHH1Q9ULM0 1364 aa23.51■■□□□ 1.35
LINC00398-201ENST00000414407 RALGAPBQ86X10 1494 aa23.5■■□□□ 1.35
LINC00398-201ENST00000414407 POGKQ9P215 609 aa23.5■■□□□ 1.35
LINC00398-201ENST00000414407 NALCNQ8IZF0 1738 aa23.49■■□□□ 1.35
LINC00398-201ENST00000414407 SLAIN2Q9P270 581 aa23.48■■□□□ 1.35
LINC00398-201ENST00000414407 ARHGEF28Q8N1W1 1705 aaKnown RBP23.45■■□□□ 1.34
LINC00398-201ENST00000414407 CDC42BPGQ6DT37 1551 aa23.45■■□□□ 1.34
LINC00398-201ENST00000414407 CARD11Q9BXL7 1154 aa23.44■■□□□ 1.34
LINC00398-201ENST00000414407 PIP4K2BP78356 416 aa23.43■■□□□ 1.34
LINC00398-201ENST00000414407 ILDR1Q86SU0 546 aaPredicted RBP23.43■■□□□ 1.34
LINC00398-201ENST00000414407 MST1RQ04912 1400 aa23.42■■□□□ 1.34
LINC00398-201ENST00000414407 EIF3AQ14152 1382 aaKnown RBP23.41■■□□□ 1.34
LINC00398-201ENST00000414407 SAFB2Q14151 953 aaKnown RBP eCLIP23.41■■□□□ 1.34
LINC00398-201ENST00000414407 ADGRB2O60241 1585 aa23.4■■□□□ 1.34
LINC00398-201ENST00000414407 CENPJQ9HC77 1338 aaPredicted RBP23.4■■□□□ 1.34
LINC00398-201ENST00000414407 SCAF1Q9H7N4 1312 aaKnown RBP23.39■■□□□ 1.34
LINC00398-201ENST00000414407 C1orf167Q5SNV9 1468 aa23.37■■□□□ 1.33
LINC00398-201ENST00000414407 MINK1Q8N4C8 1332 aaPredicted RBP23.36■■□□□ 1.33
LINC00398-201ENST00000414407 ROBO1Q9Y6N7 1651 aa23.34■■□□□ 1.33
LINC00398-201ENST00000414407 WASLO00401 505 aaPredicted RBP23.33■■□□□ 1.33
LINC00398-201ENST00000414407 BRINP3Q76B58 766 aa23.33■■□□□ 1.33
LINC00398-201ENST00000414407 HIRIP3Q9BW71 556 aaPredicted RBP23.33■■□□□ 1.33
LINC00398-201ENST00000414407 FMN2Q9NZ56 1722 aa23.33■■□□□ 1.32
LINC00398-201ENST00000414407 ANKARQ7Z5J8 1434 aa23.31■■□□□ 1.32
LINC00398-201ENST00000414407 SBNO2Q9Y2G9 1366 aa23.3■■□□□ 1.32
LINC00398-201ENST00000414407 QRICH2Q9H0J4 1663 aa23.29■■□□□ 1.32
LINC00398-201ENST00000414407 TULP4Q9NRJ4 1543 aa23.28■■□□□ 1.32
LINC00398-201ENST00000414407 SLC24A1O60721 1099 aa23.27■■□□□ 1.32
LINC00398-201ENST00000414407 HSPA1LP34931 641 aa23.27■■□□□ 1.32
LINC00398-201ENST00000414407 ORAI2Q96SN7 254 aa23.27■■□□□ 1.32
LINC00398-201ENST00000414407 CDK19Q9BWU1 502 aa23.27■■□□□ 1.32
LINC00398-201ENST00000414407 NUTM2FA1L443 756 aa23.26■■□□□ 1.31
LINC00398-201ENST00000414407 ESCO1Q5FWF5 840 aa23.26■■□□□ 1.31
LINC00398-201ENST00000414407 USP47Q96K76 1375 aa23.26■■□□□ 1.31
LINC00398-201ENST00000414407 EVC2Q86UK5 1308 aa23.25■■□□□ 1.31
LINC00398-201ENST00000414407 AHDC1Q5TGY3 1603 aaPredicted RBP23.25■■□□□ 1.31
LINC00398-201ENST00000414407 ST20-MTHFSA0A0A6YYL1 179 aa23.23■■□□□ 1.31
LINC00398-201ENST00000414407 USP32Q8NFA0 1604 aa23.22■■□□□ 1.31
LINC00398-201ENST00000414407 PRR36Q9H6K5 1346 aa23.22■■□□□ 1.31
LINC00398-201ENST00000414407 NUDT16Q96DE0 195 aaKnown RBP23.21■■□□□ 1.31
LINC00398-201ENST00000414407 PHF8Q9UPP1 1060 aa23.21■■□□□ 1.31
LINC00398-201ENST00000414407 KIF1AQ12756 1690 aa23.2■■□□□ 1.3
LINC00398-201ENST00000414407 ATP7BP35670 1465 aa23.2■■□□□ 1.3
LINC00398-201ENST00000414407 SRPK2P78362 688 aaKnown RBP23.2■■□□□ 1.3
LINC00398-201ENST00000414407 TESK2Q96S53 571 aa23.2■■□□□ 1.3
LINC00398-201ENST00000414407 NHSL1Q5SYE7 1610 aa23.19■■□□□ 1.3
LINC00398-201ENST00000414407 NPHP3Q7Z494 1330 aa23.19■■□□□ 1.3
LINC00398-201ENST00000414407 CCDC61Q9Y6R9 512 aa23.19■■□□□ 1.3
LINC00398-201ENST00000414407 PHLPP1O60346 1717 aa23.19■■□□□ 1.3
LINC00398-201ENST00000414407 PUS7Q96PZ0 661 aaKnown RBP23.17■■□□□ 1.3
LINC00398-201ENST00000414407 CABP2Q9NPB3 220 aa23.17■■□□□ 1.3
LINC00398-201ENST00000414407 RGPD8O14715 1765 aaPredicted RBP23.17■■□□□ 1.3
LINC00398-201ENST00000414407 SOS2Q07890 1332 aaPredicted RBP23.16■■□□□ 1.3
LINC00398-201ENST00000414407 FOXO3O43524 673 aa23.16■■□□□ 1.3
LINC00398-201ENST00000414407 EIF4G2P78344 907 aaKnown RBP eCLIP23.16■■□□□ 1.3
LINC00398-201ENST00000414407 COL16A1Q07092 1604 aaPredicted RBP23.15■■□□□ 1.3
LINC00398-201ENST00000414407 ITSN1Q15811 1721 aa23.14■■□□□ 1.3
LINC00398-201ENST00000414407 PLEKHG3A1L390 1219 aa23.14■■□□□ 1.29
LINC00398-201ENST00000414407 DDX17Q92841 729 aaKnown RBP23.14■■□□□ 1.29
LINC00398-201ENST00000414407 LRRC59Q96AG4 307 aaKnown RBP23.14■■□□□ 1.29
LINC00398-201ENST00000414407 ATAD2Q6PL18 1390 aa23.14■■□□□ 1.29
LINC00398-201ENST00000414407 TOPAZ1Q8N9V7 1692 aa23.13■■□□□ 1.29
LINC00398-201ENST00000414407 PMFBP1Q8TBY8 1022 aa23.12■■□□□ 1.29
LINC00398-201ENST00000414407 PXDNQ92626 1479 aa23.11■■□□□ 1.29
LINC00398-201ENST00000414407 TMF1P82094 1093 aa23.11■■□□□ 1.29
LINC00398-201ENST00000414407 JCADQ9P266 1359 aa23.11■■□□□ 1.29
LINC00398-201ENST00000414407 PPIP5K1Q6PFW1 1433 aa23.1■■□□□ 1.29
LINC00398-201ENST00000414407 PSME1Q06323 249 aa23.1■■□□□ 1.29
LINC00398-201ENST00000414407 POLR3AO14802 1390 aaPredicted RBP23.1■■□□□ 1.29
LINC00398-201ENST00000414407 HSPA5P11021 654 aaKnown RBP23.09■■□□□ 1.29
LINC00398-201ENST00000414407 KRT28Q7Z3Y7 464 aa23.09■■□□□ 1.29
LINC00398-201ENST00000414407 NGDNQ8NEJ9 315 aaKnown RBP23.09■■□□□ 1.29
LINC00398-201ENST00000414407 CDCA8Q53HL2 280 aa23.08■■□□□ 1.29
LINC00398-201ENST00000414407 CABP1Q9NZU7 370 aa23.07■■□□□ 1.28
LINC00398-201ENST00000414407 ACEP12821 1306 aa23.07■■□□□ 1.28
LINC00398-201ENST00000414407 SBNO1A3KN83 1393 aa23.06■■□□□ 1.28
LINC00398-201ENST00000414407 DISP3Q9P2K9 1392 aa23.05■■□□□ 1.28
LINC00398-201ENST00000414407 XPCQ01831 940 aaPredicted RBP23.05■■□□□ 1.28
LINC00398-201ENST00000414407 ZEB1P37275 1124 aaPredicted RBP23.04■■□□□ 1.28
LINC00398-201ENST00000414407 NINLQ9Y2I6 1382 aa23.03■■□□□ 1.28
LINC00398-201ENST00000414407 SPATA31A6Q5VVP1 1343 aa23.03■■□□□ 1.28
LINC00398-201ENST00000414407 SPATA31A3Q5VYP0 1347 aa23.03■■□□□ 1.28
LINC00398-201ENST00000414407 SHPRHQ149N8 1683 aa23.03■■□□□ 1.28
LINC00398-201ENST00000414407 BRD4O60885 1362 aaPredicted RBP23.02■■□□□ 1.28
LINC00398-201ENST00000414407 PNPLA6Q8IY17 1366 aa23.02■■□□□ 1.28
LINC00398-201ENST00000414407 ZNF692Q9BU19 519 aaPredicted RBP23.02■■□□□ 1.28
LINC00398-201ENST00000414407 TNS3Q68CZ2 1445 aa23■■□□□ 1.27
LINC00398-201ENST00000414407 CPSF1Q10570 1443 aaKnown RBP22.99■■□□□ 1.27
LINC00398-201ENST00000414407 TRPM3Q9HCF6 1732 aaPredicted RBP22.98■■□□□ 1.27
LINC00398-201ENST00000414407 ARHGEF10O15013 1369 aa22.98■■□□□ 1.27
LINC00398-201ENST00000414407 TMC1Q8TDI8 760 aa22.97■■□□□ 1.27
LINC00398-201ENST00000414407 SLC12A5Q9H2X9 1139 aa22.96■■□□□ 1.27
LINC00398-201ENST00000414407 USP6P35125 1406 aa22.96■■□□□ 1.27
LINC00398-201ENST00000414407 COL22A1Q8NFW1 1626 aaPredicted RBP22.96■■□□□ 1.27
LINC00398-201ENST00000414407 TERF2IPQ9NYB0 399 aa22.95■■□□□ 1.26
LINC00398-201ENST00000414407 HDGFL2Q7Z4V5 671 aaPredicted RBP22.94■■□□□ 1.26
LINC00398-201ENST00000414407 CD163L1Q9NR16 1453 aa22.93■■□□□ 1.26
LINC00398-201ENST00000414407 SSH2Q76I76 1423 aa22.93■■□□□ 1.26
LINC00398-201ENST00000414407 PAK3O75914 559 aaPredicted RBP22.93■■□□□ 1.26
LINC00398-201ENST00000414407 ALS2Q96Q42 1657 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms