RNA–Protein interactions for RNA: ENST00000414044.1

VTA1P1-201, Transcript of vesicle trafficking 1 pseudogene 1, humanhuman

BASIC

Gene VTA1P1, Length 866 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1P1-201ENST00000414044 PRR20CP86479 221 aa9.11□□□□□ -0.95
VTA1P1-201ENST00000414044 PRR20DP86480 221 aa9.11□□□□□ -0.95
VTA1P1-201ENST00000414044 PRR20BP86481 221 aa9.11□□□□□ -0.95
VTA1P1-201ENST00000414044 PRR20AP86496 221 aa9.11□□□□□ -0.95
VTA1P1-201ENST00000414044 AMHR2Q16671 573 aa9.11□□□□□ -0.95
VTA1P1-201ENST00000414044 FAM117AQ9C073 453 aa9.11□□□□□ -0.95
VTA1P1-201ENST00000414044 PPEF1O14829 653 aaPredicted RBP9.1□□□□□ -0.95
VTA1P1-201ENST00000414044 LIAT1Q6ZQX7 453 aa9.1□□□□□ -0.95
VTA1P1-201ENST00000414044 DDRGK1Q96HY6 314 aa9.1□□□□□ -0.95
VTA1P1-201ENST00000414044 TTLL12Q14166 644 aaPredicted RBP9.09□□□□□ -0.95
VTA1P1-201ENST00000414044 MSS51Q4VC12 460 aa9.09□□□□□ -0.95
VTA1P1-201ENST00000414044 BRICD5Q6PL45 260 aa9.09□□□□□ -0.95
VTA1P1-201ENST00000414044 ZMYND15Q9H091 742 aa9.09□□□□□ -0.95
VTA1P1-201ENST00000414044 FAM217BQ9NTX9 383 aaPredicted RBP9.09□□□□□ -0.95
VTA1P1-201ENST00000414044 TRIM67Q6ZTA4 783 aa9.08□□□□□ -0.96
VTA1P1-201ENST00000414044 NUTM1Q86Y26 1132 aa9.08□□□□□ -0.96
VTA1P1-201ENST00000414044 PARP9Q8IXQ6 854 aa9.08□□□□□ -0.96
VTA1P1-201ENST00000414044 PLEKHG3A1L390 1219 aa9.07□□□□□ -0.96
VTA1P1-201ENST00000414044 LCE2BO14633 110 aa9.07□□□□□ -0.96
VTA1P1-201ENST00000414044 RPIAP49247 311 aa9.07□□□□□ -0.96
VTA1P1-201ENST00000414044 FAM160A2Q8N612 972 aaPredicted RBP9.07□□□□□ -0.96
VTA1P1-201ENST00000414044 RSPH6AQ9H0K4 717 aa9.07□□□□□ -0.96
VTA1P1-201ENST00000414044 ZNF697Q5TEC3 545 aa9.06□□□□□ -0.96
VTA1P1-201ENST00000414044 HOXA2O43364 376 aa9.05□□□□□ -0.96
VTA1P1-201ENST00000414044 PLA2G2CQ5R387 149 aa9.05□□□□□ -0.96
VTA1P1-201ENST00000414044 FCF1Q9Y324 198 aaKnown RBP9.05□□□□□ -0.96
VTA1P1-201ENST00000414044 GDF9O60383 454 aa9.04□□□□□ -0.96
VTA1P1-201ENST00000414044 RNF19BQ6ZMZ0 732 aa9.04□□□□□ -0.96
VTA1P1-201ENST00000414044 ZBTB24O43167 697 aaPredicted RBP9.03□□□□□ -0.96
VTA1P1-201ENST00000414044 DGAT1O75907 488 aa9.03□□□□□ -0.96
VTA1P1-201ENST00000414044 CD2BP2O95400 341 aaKnown RBP9.03□□□□□ -0.96
VTA1P1-201ENST00000414044 USB1Q9BQ65 265 aaKnown RBP9.03□□□□□ -0.96
VTA1P1-201ENST00000414044 SSTR3P32745 418 aaPredicted RBP9.02□□□□□ -0.97
VTA1P1-201ENST00000414044 MMP16P51512 607 aa9.01□□□□□ -0.97
VTA1P1-201ENST00000414044 PRDM9Q9NQV7 894 aa9.01□□□□□ -0.97
VTA1P1-201ENST00000414044 DIXDC1Q155Q3 683 aa9□□□□□ -0.97
VTA1P1-201ENST00000414044 PKDCCQ504Y2 493 aa9□□□□□ -0.97
VTA1P1-201ENST00000414044 GIGYF2Q6Y7W6 1299 aaKnown RBP9□□□□□ -0.97
VTA1P1-201ENST00000414044 GOPCQ9HD26 462 aa9□□□□□ -0.97
VTA1P1-201ENST00000414044 FLIIQ13045 1269 aa8.98□□□□□ -0.97
VTA1P1-201ENST00000414044 DXOO77932 396 aaKnown RBP8.97□□□□□ -0.97
VTA1P1-201ENST00000414044 FDX1P10109 184 aa8.97□□□□□ -0.97
VTA1P1-201ENST00000414044 RETREG3Q86VR2 466 aa8.97□□□□□ -0.97
VTA1P1-201ENST00000414044 HLA-CQ95604 372 aa8.97□□□□□ -0.97
VTA1P1-201ENST00000414044 REPIN1Q9BWE0 567 aaKnown RBP8.97□□□□□ -0.97
VTA1P1-201ENST00000414044 PKD2L1Q9P0L9 805 aa8.97□□□□□ -0.97
VTA1P1-201ENST00000414044 TNFRSF10AO00220 468 aa8.96□□□□□ -0.98
VTA1P1-201ENST00000414044 C6orf229H3BNL8 230 aa8.95□□□□□ -0.98
VTA1P1-201ENST00000414044 JUNDP17535 347 aa8.95□□□□□ -0.98
VTA1P1-201ENST00000414044 MYT1Q01538 1121 aa8.95□□□□□ -0.98
VTA1P1-201ENST00000414044 GUCA2AQ02747 115 aa8.95□□□□□ -0.98
VTA1P1-201ENST00000414044 SPIRE2Q8WWL2 714 aa8.95□□□□□ -0.98
VTA1P1-201ENST00000414044 BEGAINQ9BUH8 593 aa8.95□□□□□ -0.98
VTA1P1-201ENST00000414044 FAM187AA6NFU0 413 aa8.94□□□□□ -0.98
VTA1P1-201ENST00000414044 MS4A1P11836 297 aa8.94□□□□□ -0.98
VTA1P1-201ENST00000414044 FOXC1Q12948 553 aa8.94□□□□□ -0.98
VTA1P1-201ENST00000414044 SPDYE5A6NIY4 337 aa8.93□□□□□ -0.98
VTA1P1-201ENST00000414044 UBTFP17480 764 aaKnown RBP8.93□□□□□ -0.98
VTA1P1-201ENST00000414044 CCDC24Q8N4L8 307 aa8.93□□□□□ -0.98
VTA1P1-201ENST00000414044 PCMTD1Q96MG8 357 aaPredicted RBP8.93□□□□□ -0.98
VTA1P1-201ENST00000414044 TOR4AQ9NXH8 423 aa8.93□□□□□ -0.98
VTA1P1-201ENST00000414044 TRIM32Q13049 653 aa8.92□□□□□ -0.98
VTA1P1-201ENST00000414044 CYP4X1Q8N118 509 aa8.92□□□□□ -0.98
VTA1P1-201ENST00000414044 GJA5P36382 358 aa8.91□□□□□ -0.98
VTA1P1-201ENST00000414044 ZNF787Q6DD87 383 aa8.91□□□□□ -0.98
VTA1P1-201ENST00000414044 MOXD2PA6NHM9 499 aa8.9□□□□□ -0.98
VTA1P1-201ENST00000414044 WNT7AO00755 349 aa8.9□□□□□ -0.98
VTA1P1-201ENST00000414044 SH3D19Q5HYK7 790 aa8.9□□□□□ -0.98
VTA1P1-201ENST00000414044 CRIPAKQ8N1N5 446 aa8.9□□□□□ -0.98
VTA1P1-201ENST00000414044 SYMPKQ92797 1274 aaKnown RBP8.9□□□□□ -0.98
VTA1P1-201ENST00000414044 NUDT12Q9BQG2 462 aa8.9□□□□□ -0.98
VTA1P1-201ENST00000414044 C1orf115Q9H7X2 142 aa8.9□□□□□ -0.98
VTA1P1-201ENST00000414044 AVPP01185 164 aa8.89□□□□□ -0.99
VTA1P1-201ENST00000414044 MTMR2Q13614 643 aa8.89□□□□□ -0.99
VTA1P1-201ENST00000414044 TBC1D2Q9BYX2 928 aa8.89□□□□□ -0.99
VTA1P1-201ENST00000414044 NDUFV2P19404 249 aa8.88□□□□□ -0.99
VTA1P1-201ENST00000414044 PCDHGC3Q9UN70 934 aa8.88□□□□□ -0.99
VTA1P1-201ENST00000414044 TTC24A2A3L6 582 aaPredicted RBP8.87□□□□□ -0.99
VTA1P1-201ENST00000414044 WNT7BP56706 349 aa8.87□□□□□ -0.99
VTA1P1-201ENST00000414044 CTC1Q2NKJ3 1217 aa8.87□□□□□ -0.99
VTA1P1-201ENST00000414044 ARID3AQ99856 593 aa8.87□□□□□ -0.99
VTA1P1-201ENST00000414044 CCNYL3P0C7X3 344 aa8.86□□□□□ -0.99
VTA1P1-201ENST00000414044 PTPRNQ16849 979 aa8.86□□□□□ -0.99
VTA1P1-201ENST00000414044 DESI1Q6ICB0 168 aa8.86□□□□□ -0.99
VTA1P1-201ENST00000414044 RSBN1LQ6PCB5 846 aaPredicted RBP8.86□□□□□ -0.99
VTA1P1-201ENST00000414044 AAASQ9NRG9 546 aa8.86□□□□□ -0.99
VTA1P1-201ENST00000414044 A6NJR5 290 aa8.85□□□□□ -0.99
VTA1P1-201ENST00000414044 SMCPP49901 116 aaPredicted RBP8.85□□□□□ -0.99
VTA1P1-201ENST00000414044 SNIP1Q8TAD8 396 aaKnown RBP8.85□□□□□ -0.99
VTA1P1-201ENST00000414044 PRR7Q8TB68 274 aa8.85□□□□□ -0.99
VTA1P1-201ENST00000414044 ZBTB3Q9H5J0 574 aa8.85□□□□□ -0.99
VTA1P1-201ENST00000414044 ARID3CA6NKF2 412 aa8.84□□□□□ -0.99
VTA1P1-201ENST00000414044 APBB1O00213 710 aa8.84□□□□□ -0.99
VTA1P1-201ENST00000414044 SPTLC1O15269 473 aa8.84□□□□□ -0.99
VTA1P1-201ENST00000414044 MCM6Q14566 821 aa8.83□□□□□ -1
VTA1P1-201ENST00000414044 PRPF38BQ5VTL8 546 aaKnown RBP8.83□□□□□ -1
VTA1P1-201ENST00000414044 SKIV2LQ15477 1246 aaKnown RBP8.82□□□□□ -1
VTA1P1-201ENST00000414044 RIC3Q7Z5B4 369 aa8.82□□□□□ -1
VTA1P1-201ENST00000414044 CLUAP1Q96AJ1 413 aa8.82□□□□□ -1
VTA1P1-201ENST00000414044 MRGPRX2Q96LB1 330 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms