RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 ADGRL3Q9HAR2 1447 aa12.65□□□□□ -0.38
UPF3AP1-201ENST00000413731 RGS12O14924 1447 aa12.64□□□□□ -0.39
UPF3AP1-201ENST00000413731 NUTM2BA6NNL0 878 aaPredicted RBP12.64□□□□□ -0.39
UPF3AP1-201ENST00000413731 NUTM2EB1AL46 878 aaPredicted RBP12.64□□□□□ -0.39
UPF3AP1-201ENST00000413731 NUTM2AQ8IVF1 878 aaPredicted RBP12.64□□□□□ -0.39
UPF3AP1-201ENST00000413731 METP08581 1390 aa12.64□□□□□ -0.39
UPF3AP1-201ENST00000413731 LAMC1P11047 1609 aa12.63□□□□□ -0.39
UPF3AP1-201ENST00000413731 AFF2P51816 1311 aa12.62□□□□□ -0.39
UPF3AP1-201ENST00000413731 PNPLA6Q8IY17 1366 aa12.62□□□□□ -0.39
UPF3AP1-201ENST00000413731 RXRBP28702 533 aa12.61□□□□□ -0.39
UPF3AP1-201ENST00000413731 DDX17Q92841 729 aaKnown RBP12.61□□□□□ -0.39
UPF3AP1-201ENST00000413731 POLA2Q14181 598 aa12.6□□□□□ -0.39
UPF3AP1-201ENST00000413731 VSIG10Q8N0Z9 540 aa12.6□□□□□ -0.39
UPF3AP1-201ENST00000413731 ITGAEP38570 1179 aa12.59□□□□□ -0.39
UPF3AP1-201ENST00000413731 C1orf167Q5SNV9 1468 aa12.59□□□□□ -0.39
UPF3AP1-201ENST00000413731 PPLO60437 1756 aa12.58□□□□□ -0.39
UPF3AP1-201ENST00000413731 PTCH1Q13635 1447 aa12.58□□□□□ -0.4
UPF3AP1-201ENST00000413731 ZNF326Q5BKZ1 582 aaKnown RBP12.58□□□□□ -0.4
UPF3AP1-201ENST00000413731 C8orf37Q96NL8 207 aa12.58□□□□□ -0.4
UPF3AP1-201ENST00000413731 COL22A1Q8NFW1 1626 aaPredicted RBP12.58□□□□□ -0.4
UPF3AP1-201ENST00000413731 MARF1Q9Y4F3 1742 aaKnown RBP12.57□□□□□ -0.4
UPF3AP1-201ENST00000413731 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.56□□□□□ -0.4
UPF3AP1-201ENST00000413731 PRKCSHP14314 528 aaPredicted RBP12.55□□□□□ -0.4
UPF3AP1-201ENST00000413731 KLHL34Q8N239 644 aa12.55□□□□□ -0.4
UPF3AP1-201ENST00000413731 LRRC59Q96AG4 307 aaKnown RBP12.55□□□□□ -0.4
UPF3AP1-201ENST00000413731 PRAG1Q86YV5 1406 aa12.54□□□□□ -0.4
UPF3AP1-201ENST00000413731 PPARGC1BQ86YN6 1023 aaKnown RBP12.54□□□□□ -0.4
UPF3AP1-201ENST00000413731 ROBO2Q9HCK4 1378 aa12.54□□□□□ -0.4
UPF3AP1-201ENST00000413731 CDC42BPGQ6DT37 1551 aa12.53□□□□□ -0.4
UPF3AP1-201ENST00000413731 RBM6P78332 1123 aaKnown RBP12.53□□□□□ -0.4
UPF3AP1-201ENST00000413731 ADAMTS2O95450 1211 aa12.52□□□□□ -0.41
UPF3AP1-201ENST00000413731 QTRT2Q9H974 415 aaKnown RBP12.52□□□□□ -0.41
UPF3AP1-201ENST00000413731 SPINK5Q9NQ38 1064 aaPredicted RBP12.52□□□□□ -0.41
UPF3AP1-201ENST00000413731 CAPN15O75808 1086 aa12.51□□□□□ -0.41
UPF3AP1-201ENST00000413731 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
UPF3AP1-201ENST00000413731 MYOM2P54296 1465 aa12.51□□□□□ -0.41
UPF3AP1-201ENST00000413731 IFT172Q9UG01 1749 aa12.51□□□□□ -0.41
UPF3AP1-201ENST00000413731 SOS2Q07890 1332 aaPredicted RBP12.5□□□□□ -0.41
UPF3AP1-201ENST00000413731 ATRNO75882 1429 aa12.5□□□□□ -0.41
UPF3AP1-201ENST00000413731 NAIPQ13075 1403 aa12.5□□□□□ -0.41
UPF3AP1-201ENST00000413731 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.5□□□□□ -0.41
UPF3AP1-201ENST00000413731 KNDC1Q76NI1 1749 aa12.49□□□□□ -0.41
UPF3AP1-201ENST00000413731 PXDNQ92626 1479 aa12.49□□□□□ -0.41
UPF3AP1-201ENST00000413731 ATAD2Q6PL18 1390 aa12.49□□□□□ -0.41
UPF3AP1-201ENST00000413731 ECM2O94769 699 aaPredicted RBP12.49□□□□□ -0.41
UPF3AP1-201ENST00000413731 NGLY1Q96IV0 654 aa12.49□□□□□ -0.41
UPF3AP1-201ENST00000413731 ORAI2Q96SN7 254 aa12.49□□□□□ -0.41
UPF3AP1-201ENST00000413731 HFM1A2PYH4 1435 aa12.48□□□□□ -0.41
UPF3AP1-201ENST00000413731 RRBP1Q9P2E9 1410 aaKnown RBP12.48□□□□□ -0.41
UPF3AP1-201ENST00000413731 SPOCK2Q92563 424 aa12.48□□□□□ -0.41
UPF3AP1-201ENST00000413731 RNF39Q9H2S5 420 aa12.48□□□□□ -0.41
UPF3AP1-201ENST00000413731 BBXQ8WY36 941 aaPredicted RBP12.47□□□□□ -0.41
UPF3AP1-201ENST00000413731 USP21Q9UK80 565 aa12.47□□□□□ -0.41
UPF3AP1-201ENST00000413731 EP400Q96L91 3159 aa12.47□□□□□ -0.41
UPF3AP1-201ENST00000413731 BRWD3Q6RI45 1802 aa12.46□□□□□ -0.41
UPF3AP1-201ENST00000413731 FMN2Q9NZ56 1722 aa12.46□□□□□ -0.41
UPF3AP1-201ENST00000413731 PAXIP1Q6ZW49 1069 aaPredicted RBP12.46□□□□□ -0.41
UPF3AP1-201ENST00000413731 CFAP44Q96MT7 982 aa12.46□□□□□ -0.41
UPF3AP1-201ENST00000413731 TRPC5Q9UL62 973 aaPredicted RBP12.45□□□□□ -0.42
UPF3AP1-201ENST00000413731 RGPD8O14715 1765 aaPredicted RBP12.45□□□□□ -0.42
UPF3AP1-201ENST00000413731 ABCA3Q99758 1704 aa12.45□□□□□ -0.42
UPF3AP1-201ENST00000413731 KIF1AQ12756 1690 aa12.45□□□□□ -0.42
UPF3AP1-201ENST00000413731 GLI3P10071 1580 aa12.44□□□□□ -0.42
UPF3AP1-201ENST00000413731 BCL9LQ86UU0 1499 aa12.44□□□□□ -0.42
UPF3AP1-201ENST00000413731 USP32Q8NFA0 1604 aa12.44□□□□□ -0.42
UPF3AP1-201ENST00000413731 PLCH1Q4KWH8 1693 aa12.43□□□□□ -0.42
UPF3AP1-201ENST00000413731 VGFO15240 615 aaPredicted RBP12.43□□□□□ -0.42
UPF3AP1-201ENST00000413731 FNBP4Q8N3X1 1017 aaPredicted RBP12.43□□□□□ -0.42
UPF3AP1-201ENST00000413731 ZBTB12Q9Y330 459 aaPredicted RBP12.43□□□□□ -0.42
UPF3AP1-201ENST00000413731 TECPR2O15040 1411 aa12.43□□□□□ -0.42
UPF3AP1-201ENST00000413731 SRCAPQ6ZRS2 3230 aa12.43□□□□□ -0.42
UPF3AP1-201ENST00000413731 NPHP3Q7Z494 1330 aa12.42□□□□□ -0.42
UPF3AP1-201ENST00000413731 XPCQ01831 940 aaPredicted RBP12.42□□□□□ -0.42
UPF3AP1-201ENST00000413731 RPGRIP1LQ68CZ1 1315 aa12.41□□□□□ -0.42
UPF3AP1-201ENST00000413731 ESCO1Q5FWF5 840 aa12.4□□□□□ -0.42
UPF3AP1-201ENST00000413731 PLEKHH1Q9ULM0 1364 aa12.4□□□□□ -0.42
UPF3AP1-201ENST00000413731 RALGAPBQ86X10 1494 aa12.4□□□□□ -0.43
UPF3AP1-201ENST00000413731 SLIT2O94813 1529 aa12.39□□□□□ -0.43
UPF3AP1-201ENST00000413731 NWD2Q9ULI1 1742 aa12.39□□□□□ -0.43
UPF3AP1-201ENST00000413731 ADGRF5Q8IZF2 1346 aa12.38□□□□□ -0.43
UPF3AP1-201ENST00000413731 SPATA31E1Q6ZUB1 1445 aa12.38□□□□□ -0.43
UPF3AP1-201ENST00000413731 FOXO3O43524 673 aa12.38□□□□□ -0.43
UPF3AP1-201ENST00000413731 LRPPRCP42704 1394 aaKnown RBP12.38□□□□□ -0.43
UPF3AP1-201ENST00000413731 PIK3C2GO75747 1445 aa12.37□□□□□ -0.43
UPF3AP1-201ENST00000413731 NUTM2FA1L443 756 aa12.37□□□□□ -0.43
UPF3AP1-201ENST00000413731 TPRNQ4KMQ1 711 aa12.37□□□□□ -0.43
UPF3AP1-201ENST00000413731 KDM2AQ9Y2K7 1162 aa12.37□□□□□ -0.43
UPF3AP1-201ENST00000413731 CCDC144AA2RUR9 1427 aa12.37□□□□□ -0.43
UPF3AP1-201ENST00000413731 WAPLQ7Z5K2 1190 aa12.36□□□□□ -0.43
UPF3AP1-201ENST00000413731 PLCD3Q8N3E9 789 aa12.36□□□□□ -0.43
UPF3AP1-201ENST00000413731 GJD4Q96KN9 370 aaPredicted RBP12.36□□□□□ -0.43
UPF3AP1-201ENST00000413731 STK26Q9P289 416 aa12.36□□□□□ -0.43
UPF3AP1-201ENST00000413731 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
UPF3AP1-201ENST00000413731 NRAPQ86VF7 1730 aa12.36□□□□□ -0.43
UPF3AP1-201ENST00000413731 LRP5O75197 1615 aa12.35□□□□□ -0.43
UPF3AP1-201ENST00000413731 TNS3Q68CZ2 1445 aa12.35□□□□□ -0.43
UPF3AP1-201ENST00000413731 ABCB7O75027 752 aa12.34□□□□□ -0.43
UPF3AP1-201ENST00000413731 BLMP54132 1417 aaPredicted RBP12.34□□□□□ -0.43
UPF3AP1-201ENST00000413731 YTHDC2Q9H6S0 1430 aaKnown RBP12.34□□□□□ -0.43
UPF3AP1-201ENST00000413731 SPATA31A3Q5VYP0 1347 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms