RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 HFM1A2PYH4 1435 aa14.63□□□□□ -0.07
RFFL-203ENST00000413582 PXDNQ92626 1479 aa14.63□□□□□ -0.07
RFFL-203ENST00000413582 PPLO60437 1756 aa14.62□□□□□ -0.07
RFFL-203ENST00000413582 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.62□□□□□ -0.07
RFFL-203ENST00000413582 BCL9LQ86UU0 1499 aa14.62□□□□□ -0.07
RFFL-203ENST00000413582 ZRANB1Q9UGI0 708 aa14.59□□□□□ -0.07
RFFL-203ENST00000413582 VGFO15240 615 aaPredicted RBP14.58□□□□□ -0.08
RFFL-203ENST00000413582 NPHP3Q7Z494 1330 aa14.58□□□□□ -0.08
RFFL-203ENST00000413582 GLI3P10071 1580 aa14.57□□□□□ -0.08
RFFL-203ENST00000413582 NAIPQ13075 1403 aa14.57□□□□□ -0.08
RFFL-203ENST00000413582 FOXD1Q16676 465 aa14.56□□□□□ -0.08
RFFL-203ENST00000413582 CCDC125Q86Z20 511 aa14.55□□□□□ -0.08
RFFL-203ENST00000413582 RPGRIP1LQ68CZ1 1315 aa14.55□□□□□ -0.08
RFFL-203ENST00000413582 BRWD3Q6RI45 1802 aa14.55□□□□□ -0.08
RFFL-203ENST00000413582 ESCO1Q5FWF5 840 aa14.54□□□□□ -0.08
RFFL-203ENST00000413582 GJD4Q96KN9 370 aaPredicted RBP14.54□□□□□ -0.08
RFFL-203ENST00000413582 TECPR2O15040 1411 aa14.54□□□□□ -0.08
RFFL-203ENST00000413582 RALGAPBQ86X10 1494 aa14.54□□□□□ -0.08
RFFL-203ENST00000413582 SLIT2O94813 1529 aa14.54□□□□□ -0.08
RFFL-203ENST00000413582 USP32Q8NFA0 1604 aa14.54□□□□□ -0.08
RFFL-203ENST00000413582 KNDC1Q76NI1 1749 aa14.54□□□□□ -0.08
RFFL-203ENST00000413582 FMN2Q9NZ56 1722 aa14.53□□□□□ -0.08
RFFL-203ENST00000413582 BLMP54132 1417 aaPredicted RBP14.53□□□□□ -0.08
RFFL-203ENST00000413582 XPCQ01831 940 aaPredicted RBP14.53□□□□□ -0.08
RFFL-203ENST00000413582 KIF1AQ12756 1690 aa14.52□□□□□ -0.08
RFFL-203ENST00000413582 FOXO3O43524 673 aa14.52□□□□□ -0.09
RFFL-203ENST00000413582 RRBP1Q9P2E9 1410 aaKnown RBP14.51□□□□□ -0.09
RFFL-203ENST00000413582 LRPPRCP42704 1394 aaKnown RBP14.51□□□□□ -0.09
RFFL-203ENST00000413582 IFT172Q9UG01 1749 aa14.51□□□□□ -0.09
RFFL-203ENST00000413582 PPARGC1BQ86YN6 1023 aaKnown RBP14.5□□□□□ -0.09
RFFL-203ENST00000413582 UNC5CLQ8IV45 518 aa14.5□□□□□ -0.09
RFFL-203ENST00000413582 LRP5O75197 1615 aa14.5□□□□□ -0.09
RFFL-203ENST00000413582 CCDC144AA2RUR9 1427 aa14.49□□□□□ -0.09
RFFL-203ENST00000413582 ABCA3Q99758 1704 aa14.49□□□□□ -0.09
RFFL-203ENST00000413582 PLCH1Q4KWH8 1693 aa14.49□□□□□ -0.09
RFFL-203ENST00000413582 PLEKHH1Q9ULM0 1364 aa14.48□□□□□ -0.09
RFFL-203ENST00000413582 NWD2Q9ULI1 1742 aa14.48□□□□□ -0.09
RFFL-203ENST00000413582 SPATA31A3Q5VYP0 1347 aa14.47□□□□□ -0.09
RFFL-203ENST00000413582 ADGRF5Q8IZF2 1346 aa14.47□□□□□ -0.09
RFFL-203ENST00000413582 NUTM2FA1L443 756 aa14.47□□□□□ -0.09
RFFL-203ENST00000413582 ABCC11Q96J66 1382 aa14.47□□□□□ -0.09
RFFL-203ENST00000413582 WAPLQ7Z5K2 1190 aa14.46□□□□□ -0.09
RFFL-203ENST00000413582 SLC4A1APQ9BWU0 796 aaKnown RBP14.46□□□□□ -0.09
RFFL-203ENST00000413582 RGPD8O14715 1765 aaPredicted RBP14.46□□□□□ -0.09
RFFL-203ENST00000413582 TNS3Q68CZ2 1445 aa14.46□□□□□ -0.09
RFFL-203ENST00000413582 SPATA31E1Q6ZUB1 1445 aa14.46□□□□□ -0.09
RFFL-203ENST00000413582 PIK3C2GO75747 1445 aa14.45□□□□□ -0.1
RFFL-203ENST00000413582 DEFB132Q7Z7B7 95 aa14.45□□□□□ -0.1
RFFL-203ENST00000413582 STK26Q9P289 416 aa14.44□□□□□ -0.1
RFFL-203ENST00000413582 ANKRD30BQ9BXX2 1392 aa14.43□□□□□ -0.1
RFFL-203ENST00000413582 YTHDC2Q9H6S0 1430 aaKnown RBP14.42□□□□□ -0.1
RFFL-203ENST00000413582 NRAPQ86VF7 1730 aa14.42□□□□□ -0.1
RFFL-203ENST00000413582 VPS72Q15906 364 aa14.42□□□□□ -0.1
RFFL-203ENST00000413582 SEPT12Q8IYM1 358 aa14.42□□□□□ -0.1
RFFL-203ENST00000413582 KRT28Q7Z3Y7 464 aa14.41□□□□□ -0.1
RFFL-203ENST00000413582 NRXN1Q9ULB1 1477 aa14.41□□□□□ -0.1
RFFL-203ENST00000413582 SF3B2Q13435 895 aaKnown RBP14.4□□□□□ -0.1
RFFL-203ENST00000413582 TMEM132EQ6IEE7 984 aa14.4□□□□□ -0.1
RFFL-203ENST00000413582 SBNO1A3KN83 1393 aa14.39□□□□□ -0.11
RFFL-203ENST00000413582 ONECUT3O60422 494 aaPredicted RBP14.39□□□□□ -0.11
RFFL-203ENST00000413582 CABLES1Q8TDN4 633 aa14.39□□□□□ -0.11
RFFL-203ENST00000413582 HAP1P54257 671 aaPredicted RBP14.38□□□□□ -0.11
RFFL-203ENST00000413582 RGL3Q3MIN7 710 aa14.38□□□□□ -0.11
RFFL-203ENST00000413582 KRT27Q7Z3Y8 459 aa14.38□□□□□ -0.11
RFFL-203ENST00000413582 PHF8Q9UPP1 1060 aa14.38□□□□□ -0.11
RFFL-203ENST00000413582 TRPM3Q9HCF6 1732 aaPredicted RBP14.38□□□□□ -0.11
RFFL-203ENST00000413582 ARHGEF10O15013 1369 aa14.37□□□□□ -0.11
RFFL-203ENST00000413582 RGPD1P0DJD0 1748 aa14.37□□□□□ -0.11
RFFL-203ENST00000413582 ADGRB2O60241 1585 aa14.36□□□□□ -0.11
RFFL-203ENST00000413582 SIRT1Q96EB6 747 aa14.36□□□□□ -0.11
RFFL-203ENST00000413582 PSME1Q06323 249 aa14.35□□□□□ -0.11
RFFL-203ENST00000413582 CCDC9Q9Y3X0 531 aaKnown RBP14.35□□□□□ -0.11
RFFL-203ENST00000413582 ALS2Q96Q42 1657 aa14.35□□□□□ -0.11
RFFL-203ENST00000413582 COL14A1Q05707 1796 aaKnown RBP14.34□□□□□ -0.11
RFFL-203ENST00000413582 ANKARQ7Z5J8 1434 aa14.34□□□□□ -0.11
RFFL-203ENST00000413582 THSD7AQ9UPZ6 1657 aa14.34□□□□□ -0.11
RFFL-203ENST00000413582 PSDA5PKW4 1024 aaPredicted RBP14.34□□□□□ -0.11
RFFL-203ENST00000413582 PLEKHG5O94827 1062 aa14.34□□□□□ -0.11
RFFL-203ENST00000413582 TNS1Q9HBL0 1735 aaKnown RBP14.34□□□□□ -0.11
RFFL-203ENST00000413582 CRYBG1Q9Y4K1 1723 aa14.34□□□□□ -0.11
RFFL-203ENST00000413582 DLC1Q96QB1 1528 aa14.34□□□□□ -0.11
RFFL-203ENST00000413582 FAM83GA6ND36 823 aa14.33□□□□□ -0.12
RFFL-203ENST00000413582 HRCP23327 699 aa14.33□□□□□ -0.12
RFFL-203ENST00000413582 BAG6P46379 1132 aa14.33□□□□□ -0.12
RFFL-203ENST00000413582 LMOD2Q6P5Q4 547 aa14.32□□□□□ -0.12
RFFL-203ENST00000413582 C14orf93Q9H972 538 aaKnown RBP14.32□□□□□ -0.12
RFFL-203ENST00000413582 DISP2A7MBM2 1401 aa14.32□□□□□ -0.12
RFFL-203ENST00000413582 A0A0G2JS52 829 aa14.31□□□□□ -0.12
RFFL-203ENST00000413582 MYT1Q01538 1121 aa14.31□□□□□ -0.12
RFFL-203ENST00000413582 FAM98CQ17RN3 349 aaKnown RBP14.31□□□□□ -0.12
RFFL-203ENST00000413582 PRAM1Q96QH2 718 aa14.3□□□□□ -0.12
RFFL-203ENST00000413582 DHX57Q6P158 1386 aaKnown RBP14.3□□□□□ -0.12
RFFL-203ENST00000413582 SAFB2Q14151 953 aaKnown RBP eCLIP14.29□□□□□ -0.12
RFFL-203ENST00000413582 CFAP70Q5T0N1 1121 aa14.29□□□□□ -0.12
RFFL-203ENST00000413582 MPHOSPH9Q99550 1183 aa14.29□□□□□ -0.12
RFFL-203ENST00000413582 BTG4Q9NY30 223 aa14.29□□□□□ -0.12
RFFL-203ENST00000413582 ADGRB1O14514 1584 aa14.29□□□□□ -0.12
RFFL-203ENST00000413582 PMFBP1Q8TBY8 1022 aa14.28□□□□□ -0.12
RFFL-203ENST00000413582 TULP4Q9NRJ4 1543 aa14.27□□□□□ -0.12
RFFL-203ENST00000413582 SPATA31A5Q5VU36 1347 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms