RNA–Protein interactions for RNA: ENST00000413517.1

HERPUD2-203, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-203ENST00000413517 COL16A1Q07092 1604 aaPredicted RBP12.6□□□□□ -0.39
HERPUD2-203ENST00000413517 C14orf37Q86TY3 774 aa12.59□□□□□ -0.39
HERPUD2-203ENST00000413517 SLAIN2Q9P270 581 aa12.59□□□□□ -0.39
HERPUD2-203ENST00000413517 DCCP43146 1447 aa12.59□□□□□ -0.39
HERPUD2-203ENST00000413517 MST1RQ04912 1400 aa12.59□□□□□ -0.39
HERPUD2-203ENST00000413517 DISP3Q9P2K9 1392 aa12.58□□□□□ -0.4
HERPUD2-203ENST00000413517 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
HERPUD2-203ENST00000413517 VASPP50552 380 aaPredicted RBP12.58□□□□□ -0.4
HERPUD2-203ENST00000413517 C19orf44Q9H6X5 657 aa12.58□□□□□ -0.4
HERPUD2-203ENST00000413517 NHSL1Q5SYE7 1610 aa12.58□□□□□ -0.4
HERPUD2-203ENST00000413517 TECPR2O15040 1411 aa12.57□□□□□ -0.4
HERPUD2-203ENST00000413517 AHDC1Q5TGY3 1603 aaPredicted RBP12.57□□□□□ -0.4
HERPUD2-203ENST00000413517 DHX57Q6P158 1386 aaKnown RBP12.56□□□□□ -0.4
HERPUD2-203ENST00000413517 TMEM132EQ6IEE7 984 aa12.56□□□□□ -0.4
HERPUD2-203ENST00000413517 ADGRB1O14514 1584 aa12.56□□□□□ -0.4
HERPUD2-203ENST00000413517 LRPPRCP42704 1394 aaKnown RBP12.56□□□□□ -0.4
HERPUD2-203ENST00000413517 CADPS2Q86UW7 1296 aa12.55□□□□□ -0.4
HERPUD2-203ENST00000413517 PLEKHH1Q9ULM0 1364 aa12.55□□□□□ -0.4
HERPUD2-203ENST00000413517 YTHDC2Q9H6S0 1430 aaKnown RBP12.54□□□□□ -0.4
HERPUD2-203ENST00000413517 RGPD8O14715 1765 aaPredicted RBP12.54□□□□□ -0.4
HERPUD2-203ENST00000413517 ATF3P18847 181 aa12.54□□□□□ -0.4
HERPUD2-203ENST00000413517 CFAP70Q5T0N1 1121 aa12.54□□□□□ -0.4
HERPUD2-203ENST00000413517 ILDR2Q71H61 639 aa12.54□□□□□ -0.4
HERPUD2-203ENST00000413517 C14orf93Q9H972 538 aaKnown RBP12.54□□□□□ -0.4
HERPUD2-203ENST00000413517 CDC42BPGQ6DT37 1551 aa12.54□□□□□ -0.4
HERPUD2-203ENST00000413517 SPDYE4A6NLX3 237 aa12.53□□□□□ -0.4
HERPUD2-203ENST00000413517 BRINP3Q76B58 766 aa12.53□□□□□ -0.4
HERPUD2-203ENST00000413517 STK26Q9P289 416 aa12.53□□□□□ -0.4
HERPUD2-203ENST00000413517 FMN2Q9NZ56 1722 aa12.53□□□□□ -0.4
HERPUD2-203ENST00000413517 ABCC11Q96J66 1382 aa12.53□□□□□ -0.4
HERPUD2-203ENST00000413517 SHPRHQ149N8 1683 aa12.52□□□□□ -0.4
HERPUD2-203ENST00000413517 TPRNQ4KMQ1 711 aa12.52□□□□□ -0.41
HERPUD2-203ENST00000413517 C1orf167Q5SNV9 1468 aa12.52□□□□□ -0.41
HERPUD2-203ENST00000413517 WAPLQ7Z5K2 1190 aa12.51□□□□□ -0.41
HERPUD2-203ENST00000413517 ARHGEF28Q8N1W1 1705 aaKnown RBP12.51□□□□□ -0.41
HERPUD2-203ENST00000413517 DCAF11Q8TEB1 546 aa12.5□□□□□ -0.41
HERPUD2-203ENST00000413517 KDM2AQ9Y2K7 1162 aa12.5□□□□□ -0.41
HERPUD2-203ENST00000413517 KIAA1210Q9ULL0 1709 aa12.49□□□□□ -0.41
HERPUD2-203ENST00000413517 DLC1Q96QB1 1528 aa12.49□□□□□ -0.41
HERPUD2-203ENST00000413517 DDX17Q92841 729 aaKnown RBP12.49□□□□□ -0.41
HERPUD2-203ENST00000413517 PROM2Q8N271 834 aa12.48□□□□□ -0.41
HERPUD2-203ENST00000413517 LRP6O75581 1613 aa12.48□□□□□ -0.41
HERPUD2-203ENST00000413517 USP32Q8NFA0 1604 aa12.47□□□□□ -0.41
HERPUD2-203ENST00000413517 JCADQ9P266 1359 aa12.46□□□□□ -0.41
HERPUD2-203ENST00000413517 ORAI2Q96SN7 254 aa12.46□□□□□ -0.41
HERPUD2-203ENST00000413517 SIN3AQ96ST3 1273 aa12.46□□□□□ -0.41
HERPUD2-203ENST00000413517 ZNF219Q9P2Y4 722 aaPredicted RBP12.46□□□□□ -0.41
HERPUD2-203ENST00000413517 ADGRB2O60241 1585 aa12.46□□□□□ -0.42
HERPUD2-203ENST00000413517 IFNLR1Q8IU57 520 aaPredicted RBP12.45□□□□□ -0.42
HERPUD2-203ENST00000413517 RGS17Q9UGC6 210 aaPredicted RBP12.45□□□□□ -0.42
HERPUD2-203ENST00000413517 TRIM26Q12899 539 aaPredicted RBP12.44□□□□□ -0.42
HERPUD2-203ENST00000413517 SIRT1Q96EB6 747 aa12.44□□□□□ -0.42
HERPUD2-203ENST00000413517 U3KPZ7 1027 aaPredicted RBP12.44□□□□□ -0.42
HERPUD2-203ENST00000413517 NUTM2FA1L443 756 aa12.43□□□□□ -0.42
HERPUD2-203ENST00000413517 SAFB2Q14151 953 aaKnown RBP eCLIP12.43□□□□□ -0.42
HERPUD2-203ENST00000413517 PRAM1Q96QH2 718 aa12.43□□□□□ -0.42
HERPUD2-203ENST00000413517 TRPM1Q7Z4N2 1603 aa12.43□□□□□ -0.42
HERPUD2-203ENST00000413517 KIF1AQ12756 1690 aa12.42□□□□□ -0.42
HERPUD2-203ENST00000413517 PXDNQ92626 1479 aa12.42□□□□□ -0.42
HERPUD2-203ENST00000413517 TRAK1Q9UPV9 953 aa12.42□□□□□ -0.42
HERPUD2-203ENST00000413517 L3MBTL2Q969R5 705 aa12.41□□□□□ -0.42
HERPUD2-203ENST00000413517 STAC3Q96MF2 364 aa12.41□□□□□ -0.42
HERPUD2-203ENST00000413517 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.41□□□□□ -0.42
HERPUD2-203ENST00000413517 PNPLA6Q8IY17 1366 aa12.41□□□□□ -0.42
HERPUD2-203ENST00000413517 SOS2Q07890 1332 aaPredicted RBP12.4□□□□□ -0.42
HERPUD2-203ENST00000413517 NBPF1Q3BBV0 1214 aa12.4□□□□□ -0.42
HERPUD2-203ENST00000413517 COL22A1Q8NFW1 1626 aaPredicted RBP12.4□□□□□ -0.42
HERPUD2-203ENST00000413517 SPATA31A6Q5VVP1 1343 aa12.38□□□□□ -0.43
HERPUD2-203ENST00000413517 MARF1Q9Y4F3 1742 aaKnown RBP12.38□□□□□ -0.43
HERPUD2-203ENST00000413517 NEUROD1Q13562 356 aa12.38□□□□□ -0.43
HERPUD2-203ENST00000413517 ESCO1Q5FWF5 840 aa12.38□□□□□ -0.43
HERPUD2-203ENST00000413517 HIRIP3Q9BW71 556 aaPredicted RBP12.38□□□□□ -0.43
HERPUD2-203ENST00000413517 QRICH2Q9H0J4 1663 aa12.38□□□□□ -0.43
HERPUD2-203ENST00000413517 MINK1Q8N4C8 1332 aaPredicted RBP12.37□□□□□ -0.43
HERPUD2-203ENST00000413517 PRR36Q9H6K5 1346 aa12.37□□□□□ -0.43
HERPUD2-203ENST00000413517 TRPM3Q9HCF6 1732 aaPredicted RBP12.37□□□□□ -0.43
HERPUD2-203ENST00000413517 XPCQ01831 940 aaPredicted RBP12.37□□□□□ -0.43
HERPUD2-203ENST00000413517 POTEAQ6S8J7 498 aa12.37□□□□□ -0.43
HERPUD2-203ENST00000413517 BBXQ8WY36 941 aaPredicted RBP12.37□□□□□ -0.43
HERPUD2-203ENST00000413517 POGKQ9P215 609 aa12.37□□□□□ -0.43
HERPUD2-203ENST00000413517 ITSN1Q15811 1721 aa12.37□□□□□ -0.43
HERPUD2-203ENST00000413517 TULP4Q9NRJ4 1543 aa12.37□□□□□ -0.43
HERPUD2-203ENST00000413517 TOPAZ1Q8N9V7 1692 aa12.36□□□□□ -0.43
HERPUD2-203ENST00000413517 FOXO3O43524 673 aa12.36□□□□□ -0.43
HERPUD2-203ENST00000413517 LRRC59Q96AG4 307 aaKnown RBP12.36□□□□□ -0.43
HERPUD2-203ENST00000413517 ABCA3Q99758 1704 aa12.36□□□□□ -0.43
HERPUD2-203ENST00000413517 ANKARQ7Z5J8 1434 aa12.36□□□□□ -0.43
HERPUD2-203ENST00000413517 ATP7BP35670 1465 aa12.35□□□□□ -0.43
HERPUD2-203ENST00000413517 NPHP3Q7Z494 1330 aa12.35□□□□□ -0.43
HERPUD2-203ENST00000413517 NUTM2BA6NNL0 878 aaPredicted RBP12.34□□□□□ -0.43
HERPUD2-203ENST00000413517 NUTM2EB1AL46 878 aaPredicted RBP12.34□□□□□ -0.43
HERPUD2-203ENST00000413517 NBPF8Q3BBV2 869 aa12.34□□□□□ -0.43
HERPUD2-203ENST00000413517 NUTM2AQ8IVF1 878 aaPredicted RBP12.34□□□□□ -0.43
HERPUD2-203ENST00000413517 ALS2Q96Q42 1657 aa12.33□□□□□ -0.44
HERPUD2-203ENST00000413517 SOCS7O14512 581 aa12.33□□□□□ -0.44
HERPUD2-203ENST00000413517 CRYBG1Q9Y4K1 1723 aa12.32□□□□□ -0.44
HERPUD2-203ENST00000413517 WASLO00401 505 aaPredicted RBP12.32□□□□□ -0.44
HERPUD2-203ENST00000413517 PHF8Q9UPP1 1060 aa12.32□□□□□ -0.44
HERPUD2-203ENST00000413517 MEX3CQ5U5Q3 659 aaKnown RBP12.3□□□□□ -0.44
HERPUD2-203ENST00000413517 PAXIP1Q6ZW49 1069 aaPredicted RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms