RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 RUNDC1Q96C34 613 aa19.38■□□□□ 0.69
TTC39A-208ENST00000413473 CANXP27824 592 aaKnown RBP19.38■□□□□ 0.69
TTC39A-208ENST00000413473 TCP11L2Q8N4U5 519 aa19.38■□□□□ 0.69
TTC39A-208ENST00000413473 PANK1Q8TE04 598 aa19.38■□□□□ 0.69
TTC39A-208ENST00000413473 CGNL1Q0VF96 1302 aa19.37■□□□□ 0.69
TTC39A-208ENST00000413473 COG6Q9Y2V7 657 aa19.37■□□□□ 0.69
TTC39A-208ENST00000413473 RPGRIP1LQ68CZ1 1315 aa19.37■□□□□ 0.69
TTC39A-208ENST00000413473 ADGRB1O14514 1584 aa19.37■□□□□ 0.69
TTC39A-208ENST00000413473 MTHFSP49914 203 aa19.37■□□□□ 0.69
TTC39A-208ENST00000413473 NUTM2DQ5VT03 806 aaPredicted RBP19.37■□□□□ 0.69
TTC39A-208ENST00000413473 PPLO60437 1756 aa19.36■□□□□ 0.69
TTC39A-208ENST00000413473 CD109Q6YHK3 1445 aa19.36■□□□□ 0.69
TTC39A-208ENST00000413473 QRICH2Q9H0J4 1663 aa19.35■□□□□ 0.69
TTC39A-208ENST00000413473 DAXXQ9UER7 740 aaPredicted RBP19.35■□□□□ 0.69
TTC39A-208ENST00000413473 FRAT1Q92837 279 aaPredicted RBP19.35■□□□□ 0.69
TTC39A-208ENST00000413473 POGZQ7Z3K3 1410 aa19.35■□□□□ 0.69
TTC39A-208ENST00000413473 FRMPD1Q5SYB0 1578 aa19.34■□□□□ 0.69
TTC39A-208ENST00000413473 CLUAP1Q96AJ1 413 aa19.34■□□□□ 0.69
TTC39A-208ENST00000413473 SHPRHQ149N8 1683 aa19.34■□□□□ 0.69
TTC39A-208ENST00000413473 MLH3Q9UHC1 1453 aa19.34■□□□□ 0.69
TTC39A-208ENST00000413473 RARSP54136 660 aaKnown RBP19.32■□□□□ 0.68
TTC39A-208ENST00000413473 PHF23Q9BUL5 403 aaPredicted RBP19.32■□□□□ 0.68
TTC39A-208ENST00000413473 ZC3H13Q5T200 1668 aaKnown RBP19.32■□□□□ 0.68
TTC39A-208ENST00000413473 CFAP53Q96M91 514 aa19.32■□□□□ 0.68
TTC39A-208ENST00000413473 NINLQ9Y2I6 1382 aa19.32■□□□□ 0.68
TTC39A-208ENST00000413473 EVC2Q86UK5 1308 aa19.31■□□□□ 0.68
TTC39A-208ENST00000413473 WDR63Q8IWG1 891 aa19.31■□□□□ 0.68
TTC39A-208ENST00000413473 VGFO15240 615 aaPredicted RBP19.3■□□□□ 0.68
TTC39A-208ENST00000413473 ABCC3O15438 1527 aa19.29■□□□□ 0.68
TTC39A-208ENST00000413473 RAPGEF3O95398 923 aa19.29■□□□□ 0.68
TTC39A-208ENST00000413473 CABP2Q9NPB3 220 aa19.29■□□□□ 0.68
TTC39A-208ENST00000413473 IQSEC2Q5JU85 1478 aa19.28■□□□□ 0.68
TTC39A-208ENST00000413473 SAFB2Q14151 953 aaKnown RBP eCLIP19.28■□□□□ 0.68
TTC39A-208ENST00000413473 PUS7Q96PZ0 661 aaKnown RBP19.28■□□□□ 0.68
TTC39A-208ENST00000413473 BCL2L13Q9BXK5 485 aa19.28■□□□□ 0.68
TTC39A-208ENST00000413473 HECW2Q9P2P5 1572 aa19.28■□□□□ 0.68
TTC39A-208ENST00000413473 NFKBIBQ15653 356 aa19.27■□□□□ 0.68
TTC39A-208ENST00000413473 U2AF1L5P0DN76 240 aaPredicted RBP19.27■□□□□ 0.67
TTC39A-208ENST00000413473 U2AF1Q01081 240 aaKnown RBP eCLIP19.27■□□□□ 0.67
TTC39A-208ENST00000413473 CCDC27Q2M243 656 aa19.27■□□□□ 0.67
TTC39A-208ENST00000413473 TNNQ9UQP3 1299 aa19.27■□□□□ 0.67
TTC39A-208ENST00000413473 ANKRD36BQ8N2N9 1353 aa19.26■□□□□ 0.67
TTC39A-208ENST00000413473 RLBP1P12271 317 aa19.26■□□□□ 0.67
TTC39A-208ENST00000413473 SENP3Q9H4L4 574 aaPredicted RBP19.26■□□□□ 0.67
TTC39A-208ENST00000413473 GLI2P10070 1586 aa19.25■□□□□ 0.67
TTC39A-208ENST00000413473 USP32Q8NFA0 1604 aa19.25■□□□□ 0.67
TTC39A-208ENST00000413473 CFAP74Q9C0B2 1584 aa19.25■□□□□ 0.67
TTC39A-208ENST00000413473 MAPK8IP3Q9UPT6 1336 aa19.24■□□□□ 0.67
TTC39A-208ENST00000413473 IDI1Q13907 227 aa19.24■□□□□ 0.67
TTC39A-208ENST00000413473 PCDHB15Q9Y5E8 787 aa19.24■□□□□ 0.67
TTC39A-208ENST00000413473 TULP4Q9NRJ4 1543 aa19.24■□□□□ 0.67
TTC39A-208ENST00000413473 SIGLEC1Q9BZZ2 1709 aa19.24■□□□□ 0.67
TTC39A-208ENST00000413473 STK26Q9P289 416 aa19.23■□□□□ 0.67
TTC39A-208ENST00000413473 NSD2O96028 1365 aa19.22■□□□□ 0.67
TTC39A-208ENST00000413473 PMFBP1Q8TBY8 1022 aa19.22■□□□□ 0.67
TTC39A-208ENST00000413473 MYH16Q9H6N6 1097 aa19.22■□□□□ 0.67
TTC39A-208ENST00000413473 USP19O94966 1318 aa19.22■□□□□ 0.67
TTC39A-208ENST00000413473 CAMSAP1Q5T5Y3 1602 aa19.22■□□□□ 0.67
TTC39A-208ENST00000413473 SEC24BO95487 1268 aa19.22■□□□□ 0.67
TTC39A-208ENST00000413473 OSCARQ8IYS5 282 aa19.22■□□□□ 0.67
TTC39A-208ENST00000413473 AAMPQ13685 434 aa19.21■□□□□ 0.67
TTC39A-208ENST00000413473 NEXMIFQ5QGS0 1516 aa19.21■□□□□ 0.67
TTC39A-208ENST00000413473 ARHGEF28Q8N1W1 1705 aaKnown RBP19.21■□□□□ 0.67
TTC39A-208ENST00000413473 SRPK2P78362 688 aaKnown RBP19.2■□□□□ 0.66
TTC39A-208ENST00000413473 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
TTC39A-208ENST00000413473 PIK3C2BO00750 1634 aa19.19■□□□□ 0.66
TTC39A-208ENST00000413473 GGNBP2Q9H3C7 697 aa19.19■□□□□ 0.66
TTC39A-208ENST00000413473 A0A1W2PP64 1363 aa19.18■□□□□ 0.66
TTC39A-208ENST00000413473 U2SURPO15042 1029 aaKnown RBP19.17■□□□□ 0.66
TTC39A-208ENST00000413473 TSR2Q969E8 191 aaKnown RBP19.16■□□□□ 0.66
TTC39A-208ENST00000413473 SLC52A1Q9NWF4 448 aa19.16■□□□□ 0.66
TTC39A-208ENST00000413473 GSE1Q14687 1217 aa19.16■□□□□ 0.66
TTC39A-208ENST00000413473 PDZRN3Q9UPQ7 1066 aa19.16■□□□□ 0.66
TTC39A-208ENST00000413473 RWDD1Q9H446 243 aaPredicted RBP19.16■□□□□ 0.66
TTC39A-208ENST00000413473 VIRMAQ69YN4 1812 aaKnown RBP19.16■□□□□ 0.66
TTC39A-208ENST00000413473 ABCC11Q96J66 1382 aa19.16■□□□□ 0.66
TTC39A-208ENST00000413473 ZKSCAN2Q63HK3 967 aa19.15■□□□□ 0.66
TTC39A-208ENST00000413473 ARHGAP31Q2M1Z3 1444 aa19.14■□□□□ 0.66
TTC39A-208ENST00000413473 MINK1Q8N4C8 1332 aaPredicted RBP19.14■□□□□ 0.66
TTC39A-208ENST00000413473 NEO1Q92859 1461 aa19.14■□□□□ 0.65
TTC39A-208ENST00000413473 MVPQ14764 893 aaKnown RBP19.14■□□□□ 0.65
TTC39A-208ENST00000413473 PLEKHF1Q96S99 279 aa19.14■□□□□ 0.65
TTC39A-208ENST00000413473 FRAT2O75474 233 aaPredicted RBP19.14■□□□□ 0.65
TTC39A-208ENST00000413473 TMPOP42166 694 aaKnown RBP19.14■□□□□ 0.65
TTC39A-208ENST00000413473 FYB1O15117 783 aa19.13■□□□□ 0.65
TTC39A-208ENST00000413473 DIP2CQ9Y2E4 1556 aa19.13■□□□□ 0.65
TTC39A-208ENST00000413473 ZFYVE9O95405 1425 aa19.13■□□□□ 0.65
TTC39A-208ENST00000413473 EXOSC9Q06265 439 aaKnown RBP19.13■□□□□ 0.65
TTC39A-208ENST00000413473 FTSJ3Q8IY81 847 aaKnown RBP19.13■□□□□ 0.65
TTC39A-208ENST00000413473 DZIP1LQ8IYY4 767 aaKnown RBP19.12■□□□□ 0.65
TTC39A-208ENST00000413473 IL27Q8NEV9 243 aa19.12■□□□□ 0.65
TTC39A-208ENST00000413473 PRAM1Q96QH2 718 aa19.12■□□□□ 0.65
TTC39A-208ENST00000413473 TERF2IPQ9NYB0 399 aa19.12■□□□□ 0.65
TTC39A-208ENST00000413473 POGKQ9P215 609 aa19.12■□□□□ 0.65
TTC39A-208ENST00000413473 TRIM35Q9UPQ4 493 aa19.12■□□□□ 0.65
TTC39A-208ENST00000413473 ADGRB2O60241 1585 aa19.12■□□□□ 0.65
TTC39A-208ENST00000413473 CT47B1P0C2W7 299 aaPredicted RBP19.11■□□□□ 0.65
TTC39A-208ENST00000413473 SMC4Q9NTJ3 1288 aa19.11■□□□□ 0.65
TTC39A-208ENST00000413473 ATAD2Q6PL18 1390 aa19.09■□□□□ 0.65
TTC39A-208ENST00000413473 YEATS2Q9ULM3 1422 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms