RNA–Protein interactions for RNA: ENST00000413013.6

SMIM29-203, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 806 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-203ENST00000413013 NPHP3Q7Z494 1330 aa26.27■■□□□ 1.8
SMIM29-203ENST00000413013 USP21Q9UK80 565 aa26.26■■□□□ 1.79
SMIM29-203ENST00000413013 ATAD2Q6PL18 1390 aa26.24■■□□□ 1.79
SMIM29-203ENST00000413013 TRPC5Q9UL62 973 aaPredicted RBP26.24■■□□□ 1.79
SMIM29-203ENST00000413013 ESCO1Q5FWF5 840 aa26.23■■□□□ 1.79
SMIM29-203ENST00000413013 MYOM2P54296 1465 aa26.22■■□□□ 1.79
SMIM29-203ENST00000413013 KNDC1Q76NI1 1749 aa26.22■■□□□ 1.79
SMIM29-203ENST00000413013 IFT172Q9UG01 1749 aa26.22■■□□□ 1.79
SMIM29-203ENST00000413013 LRPPRCP42704 1394 aaKnown RBP26.21■■□□□ 1.79
SMIM29-203ENST00000413013 PXDNQ92626 1479 aa26.21■■□□□ 1.79
SMIM29-203ENST00000413013 TECPR2O15040 1411 aa26.21■■□□□ 1.79
SMIM29-203ENST00000413013 ANKRD30BQ9BXX2 1392 aa26.2■■□□□ 1.79
SMIM29-203ENST00000413013 MARF1Q9Y4F3 1742 aaKnown RBP26.19■■□□□ 1.78
SMIM29-203ENST00000413013 ATRNO75882 1429 aa26.19■■□□□ 1.78
SMIM29-203ENST00000413013 ADGRF5Q8IZF2 1346 aa26.18■■□□□ 1.78
SMIM29-203ENST00000413013 FOXD1Q16676 465 aa26.18■■□□□ 1.78
SMIM29-203ENST00000413013 FNBP4Q8N3X1 1017 aaPredicted RBP26.18■■□□□ 1.78
SMIM29-203ENST00000413013 KIF1AQ12756 1690 aa26.16■■□□□ 1.78
SMIM29-203ENST00000413013 SPATA31E1Q6ZUB1 1445 aa26.16■■□□□ 1.78
SMIM29-203ENST00000413013 STK26Q9P289 416 aa26.16■■□□□ 1.78
SMIM29-203ENST00000413013 RGL3Q3MIN7 710 aa26.15■■□□□ 1.78
SMIM29-203ENST00000413013 FMN2Q9NZ56 1722 aa26.14■■□□□ 1.77
SMIM29-203ENST00000413013 PIK3C2GO75747 1445 aa26.14■■□□□ 1.77
SMIM29-203ENST00000413013 FOXO3O43524 673 aa26.13■■□□□ 1.77
SMIM29-203ENST00000413013 ABCC11Q96J66 1382 aa26.12■■□□□ 1.77
SMIM29-203ENST00000413013 XPCQ01831 940 aaPredicted RBP26.12■■□□□ 1.77
SMIM29-203ENST00000413013 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.11■■□□□ 1.77
SMIM29-203ENST00000413013 NUTM2FA1L443 756 aa26.1■■□□□ 1.77
SMIM29-203ENST00000413013 WAPLQ7Z5K2 1190 aa26.1■■□□□ 1.77
SMIM29-203ENST00000413013 YTHDC2Q9H6S0 1430 aaKnown RBP26.09■■□□□ 1.77
SMIM29-203ENST00000413013 BCL9LQ86UU0 1499 aa26.09■■□□□ 1.77
SMIM29-203ENST00000413013 MPHOSPH9Q99550 1183 aa26.08■■□□□ 1.77
SMIM29-203ENST00000413013 PLEKHH1Q9ULM0 1364 aa26.07■■□□□ 1.76
SMIM29-203ENST00000413013 TMEM132EQ6IEE7 984 aa26.06■■□□□ 1.76
SMIM29-203ENST00000413013 ACIN1Q9UKV3 1341 aaKnown RBP26.05■■□□□ 1.76
SMIM29-203ENST00000413013 USP32Q8NFA0 1604 aa26.04■■□□□ 1.76
SMIM29-203ENST00000413013 GJD4Q96KN9 370 aaPredicted RBP26.02■■□□□ 1.76
SMIM29-203ENST00000413013 SPATA31A3Q5VYP0 1347 aa26.02■■□□□ 1.76
SMIM29-203ENST00000413013 TNS3Q68CZ2 1445 aa26■■□□□ 1.75
SMIM29-203ENST00000413013 HAP1P54257 671 aaPredicted RBP26■■□□□ 1.75
SMIM29-203ENST00000413013 CCDC125Q86Z20 511 aa26■■□□□ 1.75
SMIM29-203ENST00000413013 EP400Q96L91 3159 aa26■■□□□ 1.75
SMIM29-203ENST00000413013 SLIT2O94813 1529 aa25.99■■□□□ 1.75
SMIM29-203ENST00000413013 DHX57Q6P158 1386 aaKnown RBP25.99■■□□□ 1.75
SMIM29-203ENST00000413013 UNC5CLQ8IV45 518 aa25.99■■□□□ 1.75
SMIM29-203ENST00000413013 SIRT1Q96EB6 747 aa25.99■■□□□ 1.75
SMIM29-203ENST00000413013 ZRANB1Q9UGI0 708 aa25.99■■□□□ 1.75
SMIM29-203ENST00000413013 KRT28Q7Z3Y7 464 aa25.98■■□□□ 1.75
SMIM29-203ENST00000413013 RALGAPBQ86X10 1494 aa25.98■■□□□ 1.75
SMIM29-203ENST00000413013 NRXN1Q9ULB1 1477 aa25.98■■□□□ 1.75
SMIM29-203ENST00000413013 PSME1Q06323 249 aa25.97■■□□□ 1.75
SMIM29-203ENST00000413013 GLI3P10071 1580 aa25.96■■□□□ 1.75
SMIM29-203ENST00000413013 RGPD8O14715 1765 aaPredicted RBP25.96■■□□□ 1.75
SMIM29-203ENST00000413013 C14orf93Q9H972 538 aaKnown RBP25.95■■□□□ 1.74
SMIM29-203ENST00000413013 PHF8Q9UPP1 1060 aa25.95■■□□□ 1.74
SMIM29-203ENST00000413013 PLCH1Q4KWH8 1693 aa25.93■■□□□ 1.74
SMIM29-203ENST00000413013 ABCA3Q99758 1704 aa25.93■■□□□ 1.74
SMIM29-203ENST00000413013 NWD2Q9ULI1 1742 aa25.93■■□□□ 1.74
SMIM29-203ENST00000413013 ARHGEF10O15013 1369 aa25.93■■□□□ 1.74
SMIM29-203ENST00000413013 DLC1Q96QB1 1528 aa25.92■■□□□ 1.74
SMIM29-203ENST00000413013 SBNO1A3KN83 1393 aa25.92■■□□□ 1.74
SMIM29-203ENST00000413013 BLMP54132 1417 aaPredicted RBP25.9■■□□□ 1.74
SMIM29-203ENST00000413013 ANKARQ7Z5J8 1434 aa25.9■■□□□ 1.74
SMIM29-203ENST00000413013 CFAP70Q5T0N1 1121 aa25.9■■□□□ 1.74
SMIM29-203ENST00000413013 PRAM1Q96QH2 718 aa25.9■■□□□ 1.74
SMIM29-203ENST00000413013 ADGRB2O60241 1585 aa25.9■■□□□ 1.74
SMIM29-203ENST00000413013 SAFB2Q14151 953 aaKnown RBP eCLIP25.89■■□□□ 1.74
SMIM29-203ENST00000413013 SRCAPQ6ZRS2 3230 aa25.88■■□□□ 1.73
SMIM29-203ENST00000413013 LMOD2Q6P5Q4 547 aa25.88■■□□□ 1.73
SMIM29-203ENST00000413013 POGKQ9P215 609 aa25.88■■□□□ 1.73
SMIM29-203ENST00000413013 BRWD3Q6RI45 1802 aa25.87■■□□□ 1.73
SMIM29-203ENST00000413013 EIF3AQ14152 1382 aaKnown RBP25.85■■□□□ 1.73
SMIM29-203ENST00000413013 PLEKHG5O94827 1062 aa25.85■■□□□ 1.73
SMIM29-203ENST00000413013 SF3B2Q13435 895 aaKnown RBP25.85■■□□□ 1.73
SMIM29-203ENST00000413013 VPS72Q15906 364 aa25.85■■□□□ 1.73
SMIM29-203ENST00000413013 CCDC9Q9Y3X0 531 aaKnown RBP25.85■■□□□ 1.73
SMIM29-203ENST00000413013 CABLES1Q8TDN4 633 aa25.84■■□□□ 1.73
SMIM29-203ENST00000413013 SEPT12Q8IYM1 358 aa25.82■■□□□ 1.72
SMIM29-203ENST00000413013 ADGRB1O14514 1584 aa25.82■■□□□ 1.72
SMIM29-203ENST00000413013 PMFBP1Q8TBY8 1022 aa25.8■■□□□ 1.72
SMIM29-203ENST00000413013 GPRASP1Q5JY77 1395 aa25.8■■□□□ 1.72
SMIM29-203ENST00000413013 TRPM3Q9HCF6 1732 aaPredicted RBP25.8■■□□□ 1.72
SMIM29-203ENST00000413013 RAB3GAP2Q9H2M9 1393 aa25.79■■□□□ 1.72
SMIM29-203ENST00000413013 TULP4Q9NRJ4 1543 aa25.78■■□□□ 1.72
SMIM29-203ENST00000413013 NRAPQ86VF7 1730 aa25.77■■□□□ 1.72
SMIM29-203ENST00000413013 A0A0G2JS52 829 aa25.77■■□□□ 1.72
SMIM29-203ENST00000413013 MYT1Q01538 1121 aa25.77■■□□□ 1.72
SMIM29-203ENST00000413013 ALS2Q96Q42 1657 aa25.77■■□□□ 1.72
SMIM29-203ENST00000413013 KRT27Q7Z3Y8 459 aa25.76■■□□□ 1.71
SMIM29-203ENST00000413013 COL14A1Q05707 1796 aaKnown RBP25.76■■□□□ 1.71
SMIM29-203ENST00000413013 HIRIP3Q9BW71 556 aaPredicted RBP25.75■■□□□ 1.71
SMIM29-203ENST00000413013 TRAK1Q9UPV9 953 aa25.75■■□□□ 1.71
SMIM29-203ENST00000413013 MINK1Q8N4C8 1332 aaPredicted RBP25.73■■□□□ 1.71
SMIM29-203ENST00000413013 ONECUT3O60422 494 aaPredicted RBP25.73■■□□□ 1.71
SMIM29-203ENST00000413013 ITSN1Q15811 1721 aa25.72■■□□□ 1.71
SMIM29-203ENST00000413013 FAM83GA6ND36 823 aa25.72■■□□□ 1.71
SMIM29-203ENST00000413013 DEFB132Q7Z7B7 95 aa25.72■■□□□ 1.71
SMIM29-203ENST00000413013 BTG4Q9NY30 223 aa25.7■■□□□ 1.7
SMIM29-203ENST00000413013 DCAF11Q8TEB1 546 aa25.69■■□□□ 1.7
SMIM29-203ENST00000413013 STAC3Q96MF2 364 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms