RNA–Protein interactions for RNA: ENST00000412962.4

CROCCP2-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

BASIC

Gene CROCCP2, Length 2,773 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-202ENST00000412962 PTPRMP28827 1452 aa23.36■■□□□ 1.33
CROCCP2-202ENST00000412962 PUS7Q96PZ0 661 aaKnown RBP23.35■■□□□ 1.33
CROCCP2-202ENST00000412962 ZMYM3Q14202 1370 aa23.34■■□□□ 1.33
CROCCP2-202ENST00000412962 CABP2Q9NPB3 220 aa23.34■■□□□ 1.33
CROCCP2-202ENST00000412962 RIMS2Q9UQ26 1411 aa23.33■■□□□ 1.33
CROCCP2-202ENST00000412962 USP32Q8NFA0 1604 aa23.33■■□□□ 1.32
CROCCP2-202ENST00000412962 CDCA7LQ96GN5 454 aa23.32■■□□□ 1.32
CROCCP2-202ENST00000412962 PRAM1Q96QH2 718 aa23.32■■□□□ 1.32
CROCCP2-202ENST00000412962 ANKRD36BQ8N2N9 1353 aa23.3■■□□□ 1.32
CROCCP2-202ENST00000412962 POGKQ9P215 609 aa23.29■■□□□ 1.32
CROCCP2-202ENST00000412962 MORC1Q86VD1 984 aa23.29■■□□□ 1.32
CROCCP2-202ENST00000412962 MINK1Q8N4C8 1332 aaPredicted RBP23.29■■□□□ 1.32
CROCCP2-202ENST00000412962 CGNL1Q0VF96 1302 aa23.28■■□□□ 1.32
CROCCP2-202ENST00000412962 SRPK2P78362 688 aaKnown RBP23.28■■□□□ 1.32
CROCCP2-202ENST00000412962 SETD1AO15047 1707 aaKnown RBP23.27■■□□□ 1.32
CROCCP2-202ENST00000412962 RCAN3Q9UKA8 241 aa23.26■■□□□ 1.31
CROCCP2-202ENST00000412962 B4GALNT3Q6L9W6 998 aa23.26■■□□□ 1.31
CROCCP2-202ENST00000412962 TNNT2P45379 298 aaPredicted RBP23.25■■□□□ 1.31
CROCCP2-202ENST00000412962 PLEKHH1Q9ULM0 1364 aa23.25■■□□□ 1.31
CROCCP2-202ENST00000412962 POLR3AO14802 1390 aaPredicted RBP23.24■■□□□ 1.31
CROCCP2-202ENST00000412962 NINLQ9Y2I6 1382 aa23.24■■□□□ 1.31
CROCCP2-202ENST00000412962 TNRQ92752 1358 aa23.23■■□□□ 1.31
CROCCP2-202ENST00000412962 CCDC146Q8IYE0 955 aa23.23■■□□□ 1.31
CROCCP2-202ENST00000412962 ATAD2Q6PL18 1390 aa23.22■■□□□ 1.31
CROCCP2-202ENST00000412962 RRP1P56182 461 aaKnown RBP23.22■■□□□ 1.31
CROCCP2-202ENST00000412962 NRXN3Q9Y4C0 1643 aa23.22■■□□□ 1.31
CROCCP2-202ENST00000412962 A0A1W2PP64 1363 aa23.22■■□□□ 1.31
CROCCP2-202ENST00000412962 RBM19Q9Y4C8 960 aaKnown RBP23.22■■□□□ 1.31
CROCCP2-202ENST00000412962 DLC1Q96QB1 1528 aa23.21■■□□□ 1.31
CROCCP2-202ENST00000412962 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.2■■□□□ 1.3
CROCCP2-202ENST00000412962 NSD2O96028 1365 aa23.2■■□□□ 1.3
CROCCP2-202ENST00000412962 SHPRHQ149N8 1683 aa23.18■■□□□ 1.3
CROCCP2-202ENST00000412962 ZNF521Q96K83 1311 aa23.18■■□□□ 1.3
CROCCP2-202ENST00000412962 CDK19Q9BWU1 502 aa23.17■■□□□ 1.3
CROCCP2-202ENST00000412962 ABCC11Q96J66 1382 aa23.17■■□□□ 1.3
CROCCP2-202ENST00000412962 UBR1Q8IWV7 1749 aa23.16■■□□□ 1.3
CROCCP2-202ENST00000412962 WAPLQ7Z5K2 1190 aa23.16■■□□□ 1.3
CROCCP2-202ENST00000412962 APAF1O14727 1248 aa23.16■■□□□ 1.3
CROCCP2-202ENST00000412962 CD163L1Q9NR16 1453 aa23.15■■□□□ 1.3
CROCCP2-202ENST00000412962 TERF2IPQ9NYB0 399 aa23.15■■□□□ 1.3
CROCCP2-202ENST00000412962 METP08581 1390 aa23.14■■□□□ 1.3
CROCCP2-202ENST00000412962 MTHFSP49914 203 aa23.14■■□□□ 1.29
CROCCP2-202ENST00000412962 GOLGA2Q08379 1002 aa23.13■■□□□ 1.29
CROCCP2-202ENST00000412962 HDGFP51858 240 aaKnown RBP23.12■■□□□ 1.29
CROCCP2-202ENST00000412962 TMEM2Q9UHN6 1383 aa23.12■■□□□ 1.29
CROCCP2-202ENST00000412962 DUSP27Q5VZP5 1158 aa23.11■■□□□ 1.29
CROCCP2-202ENST00000412962 MSH5O43196 834 aa23.11■■□□□ 1.29
CROCCP2-202ENST00000412962 CCDC136Q96JN2 1154 aa23.11■■□□□ 1.29
CROCCP2-202ENST00000412962 CFAP53Q96M91 514 aa23.1■■□□□ 1.29
CROCCP2-202ENST00000412962 GGNBP2Q9H3C7 697 aa23.09■■□□□ 1.29
CROCCP2-202ENST00000412962 CABP1Q9NZU7 370 aa23.09■■□□□ 1.29
CROCCP2-202ENST00000412962 HDGFL2Q7Z4V5 671 aaPredicted RBP23.09■■□□□ 1.29
CROCCP2-202ENST00000412962 ANKRD26Q9UPS8 1709 aa23.09■■□□□ 1.29
CROCCP2-202ENST00000412962 KNDC1Q76NI1 1749 aa23.08■■□□□ 1.29
CROCCP2-202ENST00000412962 CEBPAP49715 358 aaPredicted RBP23.08■■□□□ 1.29
CROCCP2-202ENST00000412962 SLFN5Q08AF3 891 aa23.07■■□□□ 1.28
CROCCP2-202ENST00000412962 TXNDC2Q86VQ3 553 aa23.06■■□□□ 1.28
CROCCP2-202ENST00000412962 EXOC6Q8TAG9 804 aa23.06■■□□□ 1.28
CROCCP2-202ENST00000412962 NLRP1Q9C000 1473 aa23.06■■□□□ 1.28
CROCCP2-202ENST00000412962 FYB1O15117 783 aa23.06■■□□□ 1.28
CROCCP2-202ENST00000412962 MED14O60244 1454 aa23.05■■□□□ 1.28
CROCCP2-202ENST00000412962 NGEFQ8N5V2 710 aa23.05■■□□□ 1.28
CROCCP2-202ENST00000412962 C3P01024 1663 aa23.05■■□□□ 1.28
CROCCP2-202ENST00000412962 PLIN1O60240 522 aa23.05■■□□□ 1.28
CROCCP2-202ENST00000412962 TRHP20396 242 aaPredicted RBP23.04■■□□□ 1.28
CROCCP2-202ENST00000412962 KIF20BQ96Q89 1820 aa23.04■■□□□ 1.28
CROCCP2-202ENST00000412962 TECPR2O15040 1411 aa23.04■■□□□ 1.28
CROCCP2-202ENST00000412962 FER1L4A9Z1Z3 1794 aa23.03■■□□□ 1.28
CROCCP2-202ENST00000412962 ATP7BP35670 1465 aa23.03■■□□□ 1.28
CROCCP2-202ENST00000412962 CPS1P31327 1500 aa23.03■■□□□ 1.28
CROCCP2-202ENST00000412962 RUNDC1Q96C34 613 aa23.03■■□□□ 1.28
CROCCP2-202ENST00000412962 SPINK5Q9NQ38 1064 aaPredicted RBP23.03■■□□□ 1.28
CROCCP2-202ENST00000412962 FAM135BQ49AJ0 1406 aa23.03■■□□□ 1.28
CROCCP2-202ENST00000412962 TRMT2AQ8IZ69 625 aaKnown RBP23.02■■□□□ 1.28
CROCCP2-202ENST00000412962 WASLO00401 505 aaPredicted RBP23.02■■□□□ 1.28
CROCCP2-202ENST00000412962 IQSEC2Q5JU85 1478 aa23.01■■□□□ 1.27
CROCCP2-202ENST00000412962 ADAMTS13Q76LX8 1427 aa23.01■■□□□ 1.27
CROCCP2-202ENST00000412962 PLPPR3Q6T4P5 718 aa23.01■■□□□ 1.27
CROCCP2-202ENST00000412962 LTKP29376 864 aa23■■□□□ 1.27
CROCCP2-202ENST00000412962 E9PSI1 815 aa23■■□□□ 1.27
CROCCP2-202ENST00000412962 DMRT2Q9Y5R5 561 aa23■■□□□ 1.27
CROCCP2-202ENST00000412962 SIRT1Q96EB6 747 aa22.99■■□□□ 1.27
CROCCP2-202ENST00000412962 PLEKHG1Q9ULL1 1385 aa22.99■■□□□ 1.27
CROCCP2-202ENST00000412962 WWC1Q8IX03 1113 aa22.99■■□□□ 1.27
CROCCP2-202ENST00000412962 NKTRP30414 1462 aaKnown RBP22.98■■□□□ 1.27
CROCCP2-202ENST00000412962 TCP11L2Q8N4U5 519 aa22.98■■□□□ 1.27
CROCCP2-202ENST00000412962 RRP7AQ9Y3A4 280 aaKnown RBP22.98■■□□□ 1.27
CROCCP2-202ENST00000412962 PPIP5K1Q6PFW1 1433 aa22.98■■□□□ 1.27
CROCCP2-202ENST00000412962 U2AF1L5P0DN76 240 aaPredicted RBP22.97■■□□□ 1.27
CROCCP2-202ENST00000412962 U2AF1Q01081 240 aaKnown RBP eCLIP22.97■■□□□ 1.27
CROCCP2-202ENST00000412962 NEUROD2Q15784 382 aa22.97■■□□□ 1.27
CROCCP2-202ENST00000412962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.97■■□□□ 1.27
CROCCP2-202ENST00000412962 COL3A1P02461 1466 aaPredicted RBP22.96■■□□□ 1.27
CROCCP2-202ENST00000412962 ROBO2Q9HCK4 1378 aa22.96■■□□□ 1.27
CROCCP2-202ENST00000412962 CRBNQ96SW2 442 aa22.94■■□□□ 1.26
CROCCP2-202ENST00000412962 NUDT16Q96DE0 195 aaKnown RBP22.94■■□□□ 1.26
CROCCP2-202ENST00000412962 CPSF1Q10570 1443 aaKnown RBP22.94■■□□□ 1.26
CROCCP2-202ENST00000412962 EID1Q9Y6B2 187 aa22.93■■□□□ 1.26
CROCCP2-202ENST00000412962 C20orf194Q5TEA3 1177 aa22.93■■□□□ 1.26
CROCCP2-202ENST00000412962 SLIT1O75093 1534 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms