RNA–Protein interactions for RNA: ENST00000412947.5

ZNF3-204, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-204ENST00000412947 ATF3P18847 181 aa17.96■□□□□ 0.47
ZNF3-204ENST00000412947 SAFB2Q14151 953 aaKnown RBP eCLIP17.96■□□□□ 0.47
ZNF3-204ENST00000412947 ARHGEF28Q8N1W1 1705 aaKnown RBP17.95■□□□□ 0.46
ZNF3-204ENST00000412947 CADPS2Q86UW7 1296 aa17.94■□□□□ 0.46
ZNF3-204ENST00000412947 DCCP43146 1447 aa17.94■□□□□ 0.46
ZNF3-204ENST00000412947 NALCNQ8IZF0 1738 aa17.94■□□□□ 0.46
ZNF3-204ENST00000412947 CENPJQ9HC77 1338 aaPredicted RBP17.94■□□□□ 0.46
ZNF3-204ENST00000412947 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.92■□□□□ 0.46
ZNF3-204ENST00000412947 MINK1Q8N4C8 1332 aaPredicted RBP17.91■□□□□ 0.46
ZNF3-204ENST00000412947 CDC42BPGQ6DT37 1551 aa17.89■□□□□ 0.45
ZNF3-204ENST00000412947 HIRIP3Q9BW71 556 aaPredicted RBP17.89■□□□□ 0.45
ZNF3-204ENST00000412947 SCAF1Q9H7N4 1312 aaKnown RBP17.89■□□□□ 0.45
ZNF3-204ENST00000412947 FBXO41Q8TF61 875 aa17.88■□□□□ 0.45
ZNF3-204ENST00000412947 ADGRB2O60241 1585 aa17.87■□□□□ 0.45
ZNF3-204ENST00000412947 PIP4K2BP78356 416 aa17.87■□□□□ 0.45
ZNF3-204ENST00000412947 SLAIN2Q9P270 581 aa17.87■□□□□ 0.45
ZNF3-204ENST00000412947 USP47Q96K76 1375 aa17.87■□□□□ 0.45
ZNF3-204ENST00000412947 QRICH2Q9H0J4 1663 aa17.86■□□□□ 0.45
ZNF3-204ENST00000412947 MST1RQ04912 1400 aa17.85■□□□□ 0.45
ZNF3-204ENST00000412947 WASLO00401 505 aaPredicted RBP17.84■□□□□ 0.45
ZNF3-204ENST00000412947 ST20-MTHFSA0A0A6YYL1 179 aa17.83■□□□□ 0.44
ZNF3-204ENST00000412947 NUTM2FA1L443 756 aa17.83■□□□□ 0.44
ZNF3-204ENST00000412947 ZEB1P37275 1124 aaPredicted RBP17.83■□□□□ 0.44
ZNF3-204ENST00000412947 C1orf167Q5SNV9 1468 aa17.82■□□□□ 0.44
ZNF3-204ENST00000412947 SBNO2Q9Y2G9 1366 aa17.82■□□□□ 0.44
ZNF3-204ENST00000412947 FMN2Q9NZ56 1722 aa17.82■□□□□ 0.44
ZNF3-204ENST00000412947 EVC2Q86UK5 1308 aa17.81■□□□□ 0.44
ZNF3-204ENST00000412947 EIF4G2P78344 907 aaKnown RBP eCLIP17.81■□□□□ 0.44
ZNF3-204ENST00000412947 CDK19Q9BWU1 502 aa17.81■□□□□ 0.44
ZNF3-204ENST00000412947 SLC24A1O60721 1099 aa17.8■□□□□ 0.44
ZNF3-204ENST00000412947 SRPK2P78362 688 aaKnown RBP17.8■□□□□ 0.44
ZNF3-204ENST00000412947 ANKARQ7Z5J8 1434 aa17.8■□□□□ 0.44
ZNF3-204ENST00000412947 TULP4Q9NRJ4 1543 aa17.79■□□□□ 0.44
ZNF3-204ENST00000412947 ROBO1Q9Y6N7 1651 aa17.78■□□□□ 0.44
ZNF3-204ENST00000412947 ESCO1Q5FWF5 840 aa17.78■□□□□ 0.44
ZNF3-204ENST00000412947 BRINP3Q76B58 766 aa17.78■□□□□ 0.44
ZNF3-204ENST00000412947 HSPA5P11021 654 aaKnown RBP17.76■□□□□ 0.43
ZNF3-204ENST00000412947 TESK2Q96S53 571 aa17.76■□□□□ 0.43
ZNF3-204ENST00000412947 ORAI2Q96SN7 254 aa17.76■□□□□ 0.43
ZNF3-204ENST00000412947 CABP2Q9NPB3 220 aa17.76■□□□□ 0.43
ZNF3-204ENST00000412947 PRR36Q9H6K5 1346 aa17.75■□□□□ 0.43
ZNF3-204ENST00000412947 NUDT16Q96DE0 195 aaKnown RBP17.75■□□□□ 0.43
ZNF3-204ENST00000412947 USP32Q8NFA0 1604 aa17.74■□□□□ 0.43
ZNF3-204ENST00000412947 TMF1P82094 1093 aa17.74■□□□□ 0.43
ZNF3-204ENST00000412947 ATP7BP35670 1465 aa17.74■□□□□ 0.43
ZNF3-204ENST00000412947 PHF8Q9UPP1 1060 aa17.73■□□□□ 0.43
ZNF3-204ENST00000412947 CCDC61Q9Y6R9 512 aa17.73■□□□□ 0.43
ZNF3-204ENST00000412947 ATAD2Q6PL18 1390 aa17.72■□□□□ 0.43
ZNF3-204ENST00000412947 KIF1AQ12756 1690 aa17.71■□□□□ 0.43
ZNF3-204ENST00000412947 ILDR1Q86SU0 546 aaPredicted RBP17.71■□□□□ 0.43
ZNF3-204ENST00000412947 ITSN1Q15811 1721 aa17.71■□□□□ 0.43
ZNF3-204ENST00000412947 HSPA1LP34931 641 aa17.7■□□□□ 0.42
ZNF3-204ENST00000412947 CDCA8Q53HL2 280 aa17.7■□□□□ 0.42
ZNF3-204ENST00000412947 PMFBP1Q8TBY8 1022 aa17.7■□□□□ 0.42
ZNF3-204ENST00000412947 RGPD8O14715 1765 aaPredicted RBP17.7■□□□□ 0.42
ZNF3-204ENST00000412947 NPHP3Q7Z494 1330 aa17.7■□□□□ 0.42
ZNF3-204ENST00000412947 AHDC1Q5TGY3 1603 aaPredicted RBP17.69■□□□□ 0.42
ZNF3-204ENST00000412947 FOXO3O43524 673 aa17.69■□□□□ 0.42
ZNF3-204ENST00000412947 PUS7Q96PZ0 661 aaKnown RBP17.69■□□□□ 0.42
ZNF3-204ENST00000412947 PPIP5K1Q6PFW1 1433 aa17.69■□□□□ 0.42
ZNF3-204ENST00000412947 DISP3Q9P2K9 1392 aa17.68■□□□□ 0.42
ZNF3-204ENST00000412947 NGDNQ8NEJ9 315 aaKnown RBP17.68■□□□□ 0.42
ZNF3-204ENST00000412947 DDX17Q92841 729 aaKnown RBP17.68■□□□□ 0.42
ZNF3-204ENST00000412947 NHSL1Q5SYE7 1610 aa17.68■□□□□ 0.42
ZNF3-204ENST00000412947 TOPAZ1Q8N9V7 1692 aa17.67■□□□□ 0.42
ZNF3-204ENST00000412947 PHLPP1O60346 1717 aa17.67■□□□□ 0.42
ZNF3-204ENST00000412947 PLEKHG3A1L390 1219 aa17.66■□□□□ 0.42
ZNF3-204ENST00000412947 CABP1Q9NZU7 370 aa17.66■□□□□ 0.42
ZNF3-204ENST00000412947 PSME1Q06323 249 aa17.65■□□□□ 0.42
ZNF3-204ENST00000412947 TMC1Q8TDI8 760 aa17.65■□□□□ 0.42
ZNF3-204ENST00000412947 XPCQ01831 940 aaPredicted RBP17.64■□□□□ 0.41
ZNF3-204ENST00000412947 KRT28Q7Z3Y7 464 aa17.64■□□□□ 0.41
ZNF3-204ENST00000412947 SOS2Q07890 1332 aaPredicted RBP17.64■□□□□ 0.41
ZNF3-204ENST00000412947 POLR3GLQ9BT43 218 aa17.63■□□□□ 0.41
ZNF3-204ENST00000412947 ACEP12821 1306 aa17.63■□□□□ 0.41
ZNF3-204ENST00000412947 POLR3AO14802 1390 aaPredicted RBP17.63■□□□□ 0.41
ZNF3-204ENST00000412947 NINLQ9Y2I6 1382 aa17.63■□□□□ 0.41
ZNF3-204ENST00000412947 COL16A1Q07092 1604 aaPredicted RBP17.62■□□□□ 0.41
ZNF3-204ENST00000412947 LRRC59Q96AG4 307 aaKnown RBP17.62■□□□□ 0.41
ZNF3-204ENST00000412947 PXDNQ92626 1479 aa17.62■□□□□ 0.41
ZNF3-204ENST00000412947 SLC12A5Q9H2X9 1139 aa17.6■□□□□ 0.41
ZNF3-204ENST00000412947 SBNO1A3KN83 1393 aa17.59■□□□□ 0.41
ZNF3-204ENST00000412947 JCADQ9P266 1359 aa17.59■□□□□ 0.41
ZNF3-204ENST00000412947 HDGFL2Q7Z4V5 671 aaPredicted RBP17.59■□□□□ 0.41
ZNF3-204ENST00000412947 TERF2IPQ9NYB0 399 aa17.59■□□□□ 0.41
ZNF3-204ENST00000412947 ZNF692Q9BU19 519 aaPredicted RBP17.58■□□□□ 0.4
ZNF3-204ENST00000412947 SPATA31A3Q5VYP0 1347 aa17.57■□□□□ 0.4
ZNF3-204ENST00000412947 PAK3O75914 559 aaPredicted RBP17.57■□□□□ 0.4
ZNF3-204ENST00000412947 USP6P35125 1406 aa17.56■□□□□ 0.4
ZNF3-204ENST00000412947 TNS3Q68CZ2 1445 aa17.56■□□□□ 0.4
ZNF3-204ENST00000412947 BRD4O60885 1362 aaPredicted RBP17.56■□□□□ 0.4
ZNF3-204ENST00000412947 C11orf95C9JLR9 678 aaPredicted RBP17.56■□□□□ 0.4
ZNF3-204ENST00000412947 LMOD2Q6P5Q4 547 aa17.56■□□□□ 0.4
ZNF3-204ENST00000412947 CPSF1Q10570 1443 aaKnown RBP17.55■□□□□ 0.4
ZNF3-204ENST00000412947 KTN1Q86UP2 1357 aaKnown RBP17.55■□□□□ 0.4
ZNF3-204ENST00000412947 ARHGEF10O15013 1369 aa17.54■□□□□ 0.4
ZNF3-204ENST00000412947 PNPLA6Q8IY17 1366 aa17.54■□□□□ 0.4
ZNF3-204ENST00000412947 KIF7Q2M1P5 1343 aa17.54■□□□□ 0.4
ZNF3-204ENST00000412947 TRPM3Q9HCF6 1732 aaPredicted RBP17.54■□□□□ 0.4
ZNF3-204ENST00000412947 CD163L1Q9NR16 1453 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms