RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 RBM6P78332 1123 aaKnown RBP27.81■■■□□ 2.04
ITGA6-204ENST00000412899 ESCO1Q5FWF5 840 aa27.8■■■□□ 2.04
ITGA6-204ENST00000412899 STK26Q9P289 416 aa27.8■■■□□ 2.04
ITGA6-204ENST00000412899 ANKRD30BQ9BXX2 1392 aa27.78■■■□□ 2.04
ITGA6-204ENST00000412899 SPATA31E1Q6ZUB1 1445 aa27.77■■■□□ 2.04
ITGA6-204ENST00000412899 NPHP3Q7Z494 1330 aa27.76■■■□□ 2.03
ITGA6-204ENST00000412899 CDC42BPGQ6DT37 1551 aa27.76■■■□□ 2.03
ITGA6-204ENST00000412899 WAPLQ7Z5K2 1190 aa27.75■■■□□ 2.03
ITGA6-204ENST00000412899 RGS12O14924 1447 aa27.75■■■□□ 2.03
ITGA6-204ENST00000412899 USP21Q9UK80 565 aa27.74■■■□□ 2.03
ITGA6-204ENST00000412899 LRPPRCP42704 1394 aaKnown RBP27.73■■■□□ 2.03
ITGA6-204ENST00000412899 TMEM132EQ6IEE7 984 aa27.73■■■□□ 2.03
ITGA6-204ENST00000412899 NUTM2FA1L443 756 aa27.72■■■□□ 2.03
ITGA6-204ENST00000412899 FOXO3O43524 673 aa27.72■■■□□ 2.03
ITGA6-204ENST00000412899 TECPR2O15040 1411 aa27.72■■■□□ 2.03
ITGA6-204ENST00000412899 ABCC11Q96J66 1382 aa27.71■■■□□ 2.03
ITGA6-204ENST00000412899 IFT172Q9UG01 1749 aa27.7■■■□□ 2.03
ITGA6-204ENST00000412899 XPCQ01831 940 aaPredicted RBP27.7■■■□□ 2.02
ITGA6-204ENST00000412899 TRPC5Q9UL62 973 aaPredicted RBP27.69■■■□□ 2.02
ITGA6-204ENST00000412899 PIK3C2GO75747 1445 aa27.68■■■□□ 2.02
ITGA6-204ENST00000412899 COL22A1Q8NFW1 1626 aaPredicted RBP27.67■■■□□ 2.02
ITGA6-204ENST00000412899 FNBP4Q8N3X1 1017 aaPredicted RBP27.67■■■□□ 2.02
ITGA6-204ENST00000412899 PLEKHH1Q9ULM0 1364 aa27.67■■■□□ 2.02
ITGA6-204ENST00000412899 ACIN1Q9UKV3 1341 aaKnown RBP27.67■■■□□ 2.02
ITGA6-204ENST00000412899 PXDNQ92626 1479 aa27.66■■■□□ 2.02
ITGA6-204ENST00000412899 YTHDC2Q9H6S0 1430 aaKnown RBP27.65■■■□□ 2.02
ITGA6-204ENST00000412899 KNDC1Q76NI1 1749 aa27.64■■■□□ 2.01
ITGA6-204ENST00000412899 MYOM2P54296 1465 aa27.64■■■□□ 2.01
ITGA6-204ENST00000412899 C14orf93Q9H972 538 aaKnown RBP27.6■■■□□ 2.01
ITGA6-204ENST00000412899 ATRNO75882 1429 aa27.59■■■□□ 2.01
ITGA6-204ENST00000412899 SIRT1Q96EB6 747 aa27.59■■■□□ 2.01
ITGA6-204ENST00000412899 ATAD2Q6PL18 1390 aa27.59■■■□□ 2.01
ITGA6-204ENST00000412899 DHX57Q6P158 1386 aaKnown RBP27.58■■■□□ 2.01
ITGA6-204ENST00000412899 FMN2Q9NZ56 1722 aa27.58■■■□□ 2.01
ITGA6-204ENST00000412899 CFAP70Q5T0N1 1121 aa27.57■■■□□ 2
ITGA6-204ENST00000412899 KRT28Q7Z3Y7 464 aa27.55■■■□□ 2
ITGA6-204ENST00000412899 SPATA31A3Q5VYP0 1347 aa27.55■■■□□ 2
ITGA6-204ENST00000412899 KIF1AQ12756 1690 aa27.54■■■□□ 2
ITGA6-204ENST00000412899 BCL9LQ86UU0 1499 aa27.54■■■□□ 2
ITGA6-204ENST00000412899 MARF1Q9Y4F3 1742 aaKnown RBP27.53■■■□□ 2
ITGA6-204ENST00000412899 NRXN1Q9ULB1 1477 aa27.53■■■□□ 2
ITGA6-204ENST00000412899 SAFB2Q14151 953 aaKnown RBP eCLIP27.51■■□□□ 1.99
ITGA6-204ENST00000412899 PHF8Q9UPP1 1060 aa27.51■■□□□ 1.99
ITGA6-204ENST00000412899 GJD4Q96KN9 370 aaPredicted RBP27.5■■□□□ 1.99
ITGA6-204ENST00000412899 PRAM1Q96QH2 718 aa27.5■■□□□ 1.99
ITGA6-204ENST00000412899 RAB3GAP2Q9H2M9 1393 aa27.49■■□□□ 1.99
ITGA6-204ENST00000412899 HAP1P54257 671 aaPredicted RBP27.49■■□□□ 1.99
ITGA6-204ENST00000412899 PSME1Q06323 249 aa27.49■■□□□ 1.99
ITGA6-204ENST00000412899 POGKQ9P215 609 aa27.48■■□□□ 1.99
ITGA6-204ENST00000412899 UNC5CLQ8IV45 518 aa27.46■■□□□ 1.99
ITGA6-204ENST00000412899 RGPD8O14715 1765 aaPredicted RBP27.45■■□□□ 1.98
ITGA6-204ENST00000412899 PLEKHG5O94827 1062 aa27.44■■□□□ 1.98
ITGA6-204ENST00000412899 LMOD2Q6P5Q4 547 aa27.44■■□□□ 1.98
ITGA6-204ENST00000412899 TNS3Q68CZ2 1445 aa27.43■■□□□ 1.98
ITGA6-204ENST00000412899 SLIT2O94813 1529 aa27.42■■□□□ 1.98
ITGA6-204ENST00000412899 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.41■■□□□ 1.98
ITGA6-204ENST00000412899 CABLES1Q8TDN4 633 aa27.41■■□□□ 1.98
ITGA6-204ENST00000412899 USP32Q8NFA0 1604 aa27.41■■□□□ 1.98
ITGA6-204ENST00000412899 DLC1Q96QB1 1528 aa27.41■■□□□ 1.98
ITGA6-204ENST00000412899 PMFBP1Q8TBY8 1022 aa27.4■■□□□ 1.98
ITGA6-204ENST00000412899 KDM2AQ9Y2K7 1162 aa27.4■■□□□ 1.98
ITGA6-204ENST00000412899 SBNO1A3KN83 1393 aa27.39■■□□□ 1.98
ITGA6-204ENST00000412899 CCDC125Q86Z20 511 aa27.39■■□□□ 1.98
ITGA6-204ENST00000412899 TRAK1Q9UPV9 953 aa27.39■■□□□ 1.98
ITGA6-204ENST00000412899 RALGAPBQ86X10 1494 aa27.38■■□□□ 1.97
ITGA6-204ENST00000412899 ANKARQ7Z5J8 1434 aa27.37■■□□□ 1.97
ITGA6-204ENST00000412899 DCAF11Q8TEB1 546 aa27.37■■□□□ 1.97
ITGA6-204ENST00000412899 ARHGEF10O15013 1369 aa27.36■■□□□ 1.97
ITGA6-204ENST00000412899 HIRIP3Q9BW71 556 aaPredicted RBP27.36■■□□□ 1.97
ITGA6-204ENST00000412899 ADGRB1O14514 1584 aa27.35■■□□□ 1.97
ITGA6-204ENST00000412899 GLI3P10071 1580 aa27.35■■□□□ 1.97
ITGA6-204ENST00000412899 ZRANB1Q9UGI0 708 aa27.34■■□□□ 1.97
ITGA6-204ENST00000412899 CCDC9Q9Y3X0 531 aaKnown RBP27.34■■□□□ 1.97
ITGA6-204ENST00000412899 MINK1Q8N4C8 1332 aaPredicted RBP27.34■■□□□ 1.97
ITGA6-204ENST00000412899 ADGRB2O60241 1585 aa27.33■■□□□ 1.97
ITGA6-204ENST00000412899 VPS72Q15906 364 aa27.32■■□□□ 1.96
ITGA6-204ENST00000412899 EIF3AQ14152 1382 aaKnown RBP27.31■■□□□ 1.96
ITGA6-204ENST00000412899 SEPT12Q8IYM1 358 aa27.3■■□□□ 1.96
ITGA6-204ENST00000412899 STAC3Q96MF2 364 aa27.3■■□□□ 1.96
ITGA6-204ENST00000412899 GPRASP1Q5JY77 1395 aa27.3■■□□□ 1.96
ITGA6-204ENST00000412899 PLCH1Q4KWH8 1693 aa27.28■■□□□ 1.96
ITGA6-204ENST00000412899 ABCA3Q99758 1704 aa27.27■■□□□ 1.96
ITGA6-204ENST00000412899 FAM83GA6ND36 823 aa27.27■■□□□ 1.96
ITGA6-204ENST00000412899 WASLO00401 505 aaPredicted RBP27.27■■□□□ 1.96
ITGA6-204ENST00000412899 PRR36Q9H6K5 1346 aa27.26■■□□□ 1.95
ITGA6-204ENST00000412899 NWD2Q9ULI1 1742 aa27.26■■□□□ 1.95
ITGA6-204ENST00000412899 BLMP54132 1417 aaPredicted RBP27.25■■□□□ 1.95
ITGA6-204ENST00000412899 TULP4Q9NRJ4 1543 aa27.25■■□□□ 1.95
ITGA6-204ENST00000412899 HRCP23327 699 aa27.24■■□□□ 1.95
ITGA6-204ENST00000412899 NGDNQ8NEJ9 315 aaKnown RBP27.24■■□□□ 1.95
ITGA6-204ENST00000412899 SF3B2Q13435 895 aaKnown RBP27.23■■□□□ 1.95
ITGA6-204ENST00000412899 BRWD3Q6RI45 1802 aa27.23■■□□□ 1.95
ITGA6-204ENST00000412899 TRPM3Q9HCF6 1732 aaPredicted RBP27.22■■□□□ 1.95
ITGA6-204ENST00000412899 A0A0G2JS52 829 aa27.22■■□□□ 1.95
ITGA6-204ENST00000412899 ONECUT3O60422 494 aaPredicted RBP27.22■■□□□ 1.95
ITGA6-204ENST00000412899 MYT1Q01538 1121 aa27.22■■□□□ 1.95
ITGA6-204ENST00000412899 PAK3O75914 559 aaPredicted RBP27.21■■□□□ 1.95
ITGA6-204ENST00000412899 KRT27Q7Z3Y8 459 aa27.21■■□□□ 1.95
ITGA6-204ENST00000412899 BTG4Q9NY30 223 aa27.21■■□□□ 1.95
ITGA6-204ENST00000412899 ALS2Q96Q42 1657 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms