RNA–Protein interactions for RNA: ENST00000411796.6

CCDC196-203, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,132 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-203ENST00000411796 CERKQ8TCT0 537 aa12.77□□□□□ -0.37
CCDC196-203ENST00000411796 ANKRD30AQ9BXX3 1397 aa12.77□□□□□ -0.37
CCDC196-203ENST00000411796 SPAG9O60271 1321 aaKnown RBP12.76□□□□□ -0.37
CCDC196-203ENST00000411796 ERBB3P21860 1342 aa12.76□□□□□ -0.37
CCDC196-203ENST00000411796 DAPK1P53355 1430 aa12.76□□□□□ -0.37
CCDC196-203ENST00000411796 NCOA1Q15788 1441 aa12.76□□□□□ -0.37
CCDC196-203ENST00000411796 ADGRL2O95490 1459 aa12.76□□□□□ -0.37
CCDC196-203ENST00000411796 ABCC1P33527 1531 aa12.76□□□□□ -0.37
CCDC196-203ENST00000411796 FAM205CA6NFA0 338 aa12.75□□□□□ -0.37
CCDC196-203ENST00000411796 FOSBP53539 338 aa12.75□□□□□ -0.37
CCDC196-203ENST00000411796 SAMD9LQ8IVG5 1584 aa12.75□□□□□ -0.37
CCDC196-203ENST00000411796 AFAP1Q8N556 730 aa12.75□□□□□ -0.37
CCDC196-203ENST00000411796 PCDHGA10Q9Y5H3 936 aa12.75□□□□□ -0.37
CCDC196-203ENST00000411796 MAST1Q9Y2H9 1570 aa12.74□□□□□ -0.37
CCDC196-203ENST00000411796 POGZQ7Z3K3 1410 aa12.74□□□□□ -0.37
CCDC196-203ENST00000411796 ZNF454Q8N9F8 522 aa12.74□□□□□ -0.37
CCDC196-203ENST00000411796 PHF14O94880 888 aa12.73□□□□□ -0.37
CCDC196-203ENST00000411796 VARS2Q5ST30 1063 aaKnown RBP12.73□□□□□ -0.37
CCDC196-203ENST00000411796 DNMT1P26358 1616 aaKnown RBP12.73□□□□□ -0.37
CCDC196-203ENST00000411796 SPATA31D1Q6ZQQ2 1576 aa12.73□□□□□ -0.37
CCDC196-203ENST00000411796 ARHGEF12Q9NZN5 1544 aa12.72□□□□□ -0.37
CCDC196-203ENST00000411796 POTEB3A0JP26 581 aa12.72□□□□□ -0.37
CCDC196-203ENST00000411796 OSBPP22059 807 aa12.72□□□□□ -0.37
CCDC196-203ENST00000411796 POTEBQ6S5H4 581 aa12.72□□□□□ -0.37
CCDC196-203ENST00000411796 KDM5CP41229 1560 aa12.72□□□□□ -0.37
CCDC196-203ENST00000411796 TRAPPC8Q9Y2L5 1435 aa12.71□□□□□ -0.37
CCDC196-203ENST00000411796 HFM1A2PYH4 1435 aa12.71□□□□□ -0.38
CCDC196-203ENST00000411796 C9orf84Q5VXU9 1444 aa12.71□□□□□ -0.38
CCDC196-203ENST00000411796 DHX29Q7Z478 1369 aaKnown RBP12.7□□□□□ -0.38
CCDC196-203ENST00000411796 PSDA5PKW4 1024 aaPredicted RBP12.7□□□□□ -0.38
CCDC196-203ENST00000411796 PRIM1P49642 420 aaKnown RBP12.7□□□□□ -0.38
CCDC196-203ENST00000411796 ZMYM4Q5VZL5 1548 aa12.7□□□□□ -0.38
CCDC196-203ENST00000411796 RAPGEF3O95398 923 aa12.69□□□□□ -0.38
CCDC196-203ENST00000411796 HS3ST6Q96QI5 342 aa12.69□□□□□ -0.38
CCDC196-203ENST00000411796 EPAS1Q99814 870 aa12.69□□□□□ -0.38
CCDC196-203ENST00000411796 SYCP2Q9BX26 1530 aa12.68□□□□□ -0.38
CCDC196-203ENST00000411796 PTPRMP28827 1452 aa12.68□□□□□ -0.38
CCDC196-203ENST00000411796 SMYD5Q6GMV2 418 aa12.68□□□□□ -0.38
CCDC196-203ENST00000411796 TYW1BQ6NUM6 668 aa12.68□□□□□ -0.38
CCDC196-203ENST00000411796 ZDHHC16Q969W1 377 aa12.68□□□□□ -0.38
CCDC196-203ENST00000411796 PTPRKQ15262 1439 aa12.68□□□□□ -0.38
CCDC196-203ENST00000411796 SETD5Q9C0A6 1442 aa12.68□□□□□ -0.38
CCDC196-203ENST00000411796 PPP4R3BQ5MIZ7 849 aa12.67□□□□□ -0.38
CCDC196-203ENST00000411796 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.66□□□□□ -0.38
CCDC196-203ENST00000411796 RBM33Q96EV2 1170 aaKnown RBP12.66□□□□□ -0.38
CCDC196-203ENST00000411796 ADAM33Q9BZ11 813 aa12.66□□□□□ -0.38
CCDC196-203ENST00000411796 DUOX2Q9NRD8 1548 aa12.66□□□□□ -0.38
CCDC196-203ENST00000411796 ATP10AO60312 1499 aa12.65□□□□□ -0.38
CCDC196-203ENST00000411796 REREQ9P2R6 1566 aa12.65□□□□□ -0.38
CCDC196-203ENST00000411796 NAIPQ13075 1403 aa12.65□□□□□ -0.38
CCDC196-203ENST00000411796 ERBINQ96RT1 1412 aa12.65□□□□□ -0.38
CCDC196-203ENST00000411796 RBM26Q5T8P6 1007 aaKnown RBP12.65□□□□□ -0.38
CCDC196-203ENST00000411796 FBXW7Q969H0 707 aa12.65□□□□□ -0.38
CCDC196-203ENST00000411796 PLXNC1O60486 1568 aa12.64□□□□□ -0.39
CCDC196-203ENST00000411796 KIF15Q9NS87 1388 aa12.64□□□□□ -0.39
CCDC196-203ENST00000411796 ANKRD50Q9ULJ7 1429 aa12.63□□□□□ -0.39
CCDC196-203ENST00000411796 RICTORQ6R327 1708 aa12.63□□□□□ -0.39
CCDC196-203ENST00000411796 HSPA2P54652 639 aa12.63□□□□□ -0.39
CCDC196-203ENST00000411796 EN1Q05925 392 aaPredicted RBP12.63□□□□□ -0.39
CCDC196-203ENST00000411796 POTEGQ6S5H5 508 aa12.63□□□□□ -0.39
CCDC196-203ENST00000411796 PCGF6Q9BYE7 350 aa12.63□□□□□ -0.39
CCDC196-203ENST00000411796 RRP7BPQ9NSQ0 103 aa12.63□□□□□ -0.39
CCDC196-203ENST00000411796 CLSPNQ9HAW4 1339 aa12.62□□□□□ -0.39
CCDC196-203ENST00000411796 AGLP35573 1532 aa12.62□□□□□ -0.39
CCDC196-203ENST00000411796 ATP7AQ04656 1500 aa12.62□□□□□ -0.39
CCDC196-203ENST00000411796 ADAMTSL3P82987 1691 aa12.62□□□□□ -0.39
CCDC196-203ENST00000411796 ZNF687Q8N1G0 1237 aa12.62□□□□□ -0.39
CCDC196-203ENST00000411796 CHIC2Q9UKJ5 165 aa12.62□□□□□ -0.39
CCDC196-203ENST00000411796 A2MP01023 1474 aa12.61□□□□□ -0.39
CCDC196-203ENST00000411796 POTEMA6NI47 508 aa12.61□□□□□ -0.39
CCDC196-203ENST00000411796 TULP1O00294 542 aaPredicted RBP12.61□□□□□ -0.39
CCDC196-203ENST00000411796 ITGAEP38570 1179 aa12.61□□□□□ -0.39
CCDC196-203ENST00000411796 MYT1LQ9UL68 1186 aa12.61□□□□□ -0.39
CCDC196-203ENST00000411796 INO80Q9ULG1 1556 aaPredicted RBP12.6□□□□□ -0.39
CCDC196-203ENST00000411796 MAP3K7O43318 606 aa12.6□□□□□ -0.39
CCDC196-203ENST00000411796 C6orf132Q5T0Z8 1188 aa12.6□□□□□ -0.39
CCDC196-203ENST00000411796 POTEEQ6S8J3 1075 aa12.6□□□□□ -0.39
CCDC196-203ENST00000411796 BCL2L12Q9HB09 334 aa12.6□□□□□ -0.39
CCDC196-203ENST00000411796 ZFYVE16Q7Z3T8 1539 aa12.6□□□□□ -0.39
CCDC196-203ENST00000411796 FAM135AQ9P2D6 1515 aa12.6□□□□□ -0.39
CCDC196-203ENST00000411796 TSR1Q2NL82 804 aaKnown RBP12.59□□□□□ -0.39
CCDC196-203ENST00000411796 LMOD2Q6P5Q4 547 aa12.59□□□□□ -0.39
CCDC196-203ENST00000411796 KIDINS220Q9ULH0 1771 aa12.58□□□□□ -0.39
CCDC196-203ENST00000411796 CROCC2H7BZ55 1655 aa12.58□□□□□ -0.4
CCDC196-203ENST00000411796 AXIN2Q9Y2T1 843 aa12.57□□□□□ -0.4
CCDC196-203ENST00000411796 ADGBQ8N7X0 1667 aa12.57□□□□□ -0.4
CCDC196-203ENST00000411796 FRMPD1Q5SYB0 1578 aa12.56□□□□□ -0.4
CCDC196-203ENST00000411796 EIF2AK4Q9P2K8 1649 aaKnown RBP12.56□□□□□ -0.4
CCDC196-203ENST00000411796 BCORL1Q5H9F3 1711 aa12.56□□□□□ -0.4
CCDC196-203ENST00000411796 KANK1Q14678 1352 aa12.56□□□□□ -0.4
CCDC196-203ENST00000411796 RAB3GAP2Q9H2M9 1393 aa12.56□□□□□ -0.4
CCDC196-203ENST00000411796 NUTM2FA1L443 756 aa12.55□□□□□ -0.4
CCDC196-203ENST00000411796 KIF3BO15066 747 aa12.55□□□□□ -0.4
CCDC196-203ENST00000411796 CDHR5Q9HBB8 845 aa12.55□□□□□ -0.4
CCDC196-203ENST00000411796 ARHGAP33O14559 1287 aa12.54□□□□□ -0.4
CCDC196-203ENST00000411796 PTPREP23469 700 aa12.54□□□□□ -0.4
CCDC196-203ENST00000411796 PSEN2P49810 448 aa12.54□□□□□ -0.4
CCDC196-203ENST00000411796 KCNK17Q96T54 332 aa12.54□□□□□ -0.4
CCDC196-203ENST00000411796 COL9A1P20849 921 aa12.53□□□□□ -0.4
CCDC196-203ENST00000411796 TIMELESSQ9UNS1 1208 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms