RNA–Protein interactions for RNA: ENST00000410604.1

RNU2-39P-201, Transcript of RNA, U2 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU2-39P, Length 198 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-39P-201ENST00000410604 ZBTB24O43167 697 aaPredicted RBP7.93□□□□□ -1.14
RNU2-39P-201ENST00000410604 SNRPBP14678 240 aaKnown RBP7.93□□□□□ -1.14
RNU2-39P-201ENST00000410604 FECHP22830 423 aa7.93□□□□□ -1.14
RNU2-39P-201ENST00000410604 GCGRP47871 477 aa7.93□□□□□ -1.14
RNU2-39P-201ENST00000410604 ATP13A2Q9NQ11 1180 aa7.93□□□□□ -1.14
RNU2-39P-201ENST00000410604 MSS51Q4VC12 460 aa7.92□□□□□ -1.14
RNU2-39P-201ENST00000410604 P3H3Q8IVL6 736 aa7.92□□□□□ -1.14
RNU2-39P-201ENST00000410604 SNIP1Q8TAD8 396 aaKnown RBP7.92□□□□□ -1.14
RNU2-39P-201ENST00000410604 NLRP7Q8WX94 980 aa7.92□□□□□ -1.14
RNU2-39P-201ENST00000410604 TERTO14746 1132 aaKnown RBP7.91□□□□□ -1.14
RNU2-39P-201ENST00000410604 RNF19BQ6ZMZ0 732 aa7.91□□□□□ -1.14
RNU2-39P-201ENST00000410604 GNPATO15228 680 aa7.9□□□□□ -1.14
RNU2-39P-201ENST00000410604 TRIM47Q96LD4 638 aa7.9□□□□□ -1.14
RNU2-39P-201ENST00000410604 J3QL48 77 aa7.89□□□□□ -1.15
RNU2-39P-201ENST00000410604 TRIM32Q13049 653 aa7.89□□□□□ -1.15
RNU2-39P-201ENST00000410604 RBM26Q5T8P6 1007 aaKnown RBP7.89□□□□□ -1.15
RNU2-39P-201ENST00000410604 BCANQ96GW7 911 aa7.89□□□□□ -1.15
RNU2-39P-201ENST00000410604 MRGPRX2Q96LB1 330 aa7.89□□□□□ -1.15
RNU2-39P-201ENST00000410604 GPR37O15354 613 aa7.88□□□□□ -1.15
RNU2-39P-201ENST00000410604 SULF1Q8IWU6 871 aa7.88□□□□□ -1.15
RNU2-39P-201ENST00000410604 PHOX2BQ99453 314 aa7.88□□□□□ -1.15
RNU2-39P-201ENST00000410604 MMP16P51512 607 aa7.87□□□□□ -1.15
RNU2-39P-201ENST00000410604 HPS1Q92902 700 aa7.87□□□□□ -1.15
RNU2-39P-201ENST00000410604 SENP2Q9HC62 589 aa7.87□□□□□ -1.15
RNU2-39P-201ENST00000410604 TESPA1A2RU30 521 aaPredicted RBP7.84□□□□□ -1.15
RNU2-39P-201ENST00000410604 GRIPAP1Q4V328 841 aa7.84□□□□□ -1.15
RNU2-39P-201ENST00000410604 KIFC2Q96AC6 838 aa7.83□□□□□ -1.16
RNU2-39P-201ENST00000410604 REPIN1Q9BWE0 567 aaKnown RBP7.83□□□□□ -1.16
RNU2-39P-201ENST00000410604 Q3C1V9 767 aa7.82□□□□□ -1.16
RNU2-39P-201ENST00000410604 DXOO77932 396 aaKnown RBP7.81□□□□□ -1.16
RNU2-39P-201ENST00000410604 SKOR1P84550 965 aa7.81□□□□□ -1.16
RNU2-39P-201ENST00000410604 RC3H1Q5TC82 1133 aaKnown RBP7.81□□□□□ -1.16
RNU2-39P-201ENST00000410604 USB1Q9BQ65 265 aaKnown RBP7.8□□□□□ -1.16
RNU2-39P-201ENST00000410604 CD46P15529 392 aa7.79□□□□□ -1.16
RNU2-39P-201ENST00000410604 SMYD5Q6GMV2 418 aa7.79□□□□□ -1.16
RNU2-39P-201ENST00000410604 LORP23490 312 aaPredicted RBP7.78□□□□□ -1.16
RNU2-39P-201ENST00000410604 CCDC24Q8N4L8 307 aa7.78□□□□□ -1.16
RNU2-39P-201ENST00000410604 WNT7BP56706 349 aa7.77□□□□□ -1.17
RNU2-39P-201ENST00000410604 SLC16A10Q8TF71 515 aa7.77□□□□□ -1.17
RNU2-39P-201ENST00000410604 NXF1Q9UBU9 619 aaKnown RBP7.77□□□□□ -1.17
RNU2-39P-201ENST00000410604 GMPRP36959 345 aa7.76□□□□□ -1.17
RNU2-39P-201ENST00000410604 HLA-CQ95604 372 aa7.76□□□□□ -1.17
RNU2-39P-201ENST00000410604 FAM181BA6NEQ2 426 aa7.75□□□□□ -1.17
RNU2-39P-201ENST00000410604 KDM4AO75164 1064 aa7.75□□□□□ -1.17
RNU2-39P-201ENST00000410604 ALDH1A1P00352 501 aa7.75□□□□□ -1.17
RNU2-39P-201ENST00000410604 BMP1P13497 986 aa7.74□□□□□ -1.17
RNU2-39P-201ENST00000410604 TRIM46Q7Z4K8 759 aa7.74□□□□□ -1.17
RNU2-39P-201ENST00000410604 ZSCAN1Q8NBB4 408 aa7.74□□□□□ -1.17
RNU2-39P-201ENST00000410604 SIAH2O43255 324 aa7.73□□□□□ -1.17
RNU2-39P-201ENST00000410604 NPAS3Q8IXF0 933 aa7.73□□□□□ -1.17
RNU2-39P-201ENST00000410604 LOC100996750A0A140TA64 210 aa7.72□□□□□ -1.17
RNU2-39P-201ENST00000410604 VEGFBP49765 207 aa7.72□□□□□ -1.17
RNU2-39P-201ENST00000410604 IRF7Q92985 503 aa7.72□□□□□ -1.17
RNU2-39P-201ENST00000410604 KRTAP4-6Q9BYQ5 205 aa7.72□□□□□ -1.17
RNU2-39P-201ENST00000410604 USP46P62068 366 aa7.71□□□□□ -1.18
RNU2-39P-201ENST00000410604 H3BM21 787 aa7.7□□□□□ -1.18
RNU2-39P-201ENST00000410604 CAPN5O15484 640 aaPredicted RBP7.7□□□□□ -1.18
RNU2-39P-201ENST00000410604 HOXA2O43364 376 aa7.7□□□□□ -1.18
RNU2-39P-201ENST00000410604 JUNDP17535 347 aa7.7□□□□□ -1.18
RNU2-39P-201ENST00000410604 GPIHBP1Q8IV16 184 aa7.7□□□□□ -1.18
RNU2-39P-201ENST00000410604 ERBB4Q15303 1308 aa7.7□□□□□ -1.18
RNU2-39P-201ENST00000410604 GUCA2AQ02747 115 aa7.69□□□□□ -1.18
RNU2-39P-201ENST00000410604 PTCRAQ6ISU1 281 aaPredicted RBP7.69□□□□□ -1.18
RNU2-39P-201ENST00000410604 EHBP1Q8NDI1 1231 aa7.69□□□□□ -1.18
RNU2-39P-201ENST00000410604 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.68□□□□□ -1.18
RNU2-39P-201ENST00000410604 SYMPKQ92797 1274 aaKnown RBP7.68□□□□□ -1.18
RNU2-39P-201ENST00000410604 WASF2Q9Y6W5 498 aa7.68□□□□□ -1.18
RNU2-39P-201ENST00000410604 NUDT12Q9BQG2 462 aa7.67□□□□□ -1.18
RNU2-39P-201ENST00000410604 MDM2Q00987 491 aaPredicted RBP7.66□□□□□ -1.18
RNU2-39P-201ENST00000410604 MAP2K5Q13163 448 aa7.66□□□□□ -1.18
RNU2-39P-201ENST00000410604 ZFP42Q96MM3 310 aa7.66□□□□□ -1.18
RNU2-39P-201ENST00000410604 TULP1O00294 542 aaPredicted RBP7.65□□□□□ -1.18
RNU2-39P-201ENST00000410604 SH3BP2P78314 561 aa7.65□□□□□ -1.18
RNU2-39P-201ENST00000410604 RETREG3Q86VR2 466 aa7.64□□□□□ -1.19
RNU2-39P-201ENST00000410604 IRF6O14896 467 aa7.63□□□□□ -1.19
RNU2-39P-201ENST00000410604 TLL2Q9Y6L7 1015 aa7.61□□□□□ -1.19
RNU2-39P-201ENST00000410604 CCNYL3P0C7X3 344 aa7.6□□□□□ -1.19
RNU2-39P-201ENST00000410604 TPRNQ4KMQ1 711 aa7.6□□□□□ -1.19
RNU2-39P-201ENST00000410604 PCDHGC3Q9UN70 934 aa7.6□□□□□ -1.19
RNU2-39P-201ENST00000410604 MS4A1P11836 297 aa7.59□□□□□ -1.19
RNU2-39P-201ENST00000410604 MRPL14Q6P1L8 145 aaKnown RBP7.59□□□□□ -1.19
RNU2-39P-201ENST00000410604 UNC93B1Q9H1C4 597 aa7.59□□□□□ -1.19
RNU2-39P-201ENST00000410604 FAM217BQ9NTX9 383 aaPredicted RBP7.59□□□□□ -1.19
RNU2-39P-201ENST00000410604 SOBPA7XYQ1 873 aa7.58□□□□□ -1.2
RNU2-39P-201ENST00000410604 VSIG8P0DPA2 414 aa7.58□□□□□ -1.2
RNU2-39P-201ENST00000410604 PRKCSHP14314 528 aaPredicted RBP7.58□□□□□ -1.2
RNU2-39P-201ENST00000410604 NNTQ13423 1086 aa7.58□□□□□ -1.2
RNU2-39P-201ENST00000410604 LINC01559Q495D7 138 aa7.58□□□□□ -1.2
RNU2-39P-201ENST00000410604 NUTM1Q86Y26 1132 aa7.58□□□□□ -1.2
RNU2-39P-201ENST00000410604 BAP1Q92560 729 aa7.58□□□□□ -1.2
RNU2-39P-201ENST00000410604 EVA1BQ9NVM1 165 aa7.58□□□□□ -1.2
RNU2-39P-201ENST00000410604 MINK1Q8N4C8 1332 aaPredicted RBP7.57□□□□□ -1.2
RNU2-39P-201ENST00000410604 FDX1P10109 184 aa7.57□□□□□ -1.2
RNU2-39P-201ENST00000410604 SUZ12Q15022 739 aaKnown RBP7.57□□□□□ -1.2
RNU2-39P-201ENST00000410604 PTPRNQ16849 979 aa7.57□□□□□ -1.2
RNU2-39P-201ENST00000410604 MPNDQ8N594 471 aa7.57□□□□□ -1.2
RNU2-39P-201ENST00000410604 PURBQ96QR8 312 aaKnown RBP7.57□□□□□ -1.2
RNU2-39P-201ENST00000410604 GPCPD1Q9NPB8 672 aa7.57□□□□□ -1.2
RNU2-39P-201ENST00000410604 PLEKHG3A1L390 1219 aa7.56□□□□□ -1.2
RNU2-39P-201ENST00000410604 C6orf229H3BNL8 230 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms