RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 NBPF8Q3BBV2 869 aa34.2■■■■□ 3.07
UBE2E3-202ENST00000410062 PRAM1Q96QH2 718 aa34.2■■■■□ 3.07
UBE2E3-202ENST00000410062 TRPM1Q7Z4N2 1603 aa34.19■■■■□ 3.06
UBE2E3-202ENST00000410062 SAFB2Q14151 953 aaKnown RBP eCLIP34.18■■■■□ 3.06
UBE2E3-202ENST00000410062 POGKQ9P215 609 aa34.16■■■■□ 3.06
UBE2E3-202ENST00000410062 ROBO1Q9Y6N7 1651 aa34.14■■■■□ 3.06
UBE2E3-202ENST00000410062 ARHGEF28Q8N1W1 1705 aaKnown RBP34.12■■■■□ 3.05
UBE2E3-202ENST00000410062 MST1RQ04912 1400 aa34.12■■■■□ 3.05
UBE2E3-202ENST00000410062 HSPA1LP34931 641 aa34.11■■■■□ 3.05
UBE2E3-202ENST00000410062 ROCK2O75116 1388 aaKnown RBP34.1■■■■□ 3.05
UBE2E3-202ENST00000410062 CDC42BPGQ6DT37 1551 aa34.1■■■■□ 3.05
UBE2E3-202ENST00000410062 TIMELESSQ9UNS1 1208 aa34.04■■■■□ 3.04
UBE2E3-202ENST00000410062 MINK1Q8N4C8 1332 aaPredicted RBP34.03■■■■□ 3.04
UBE2E3-202ENST00000410062 HIRIP3Q9BW71 556 aaPredicted RBP34.03■■■■□ 3.04
UBE2E3-202ENST00000410062 C1orf167Q5SNV9 1468 aa34.03■■■■□ 3.04
UBE2E3-202ENST00000410062 BRINP3Q76B58 766 aa34.02■■■■□ 3.04
UBE2E3-202ENST00000410062 NUTM2FA1L443 756 aa34.02■■■■□ 3.04
UBE2E3-202ENST00000410062 RALGAPBQ86X10 1494 aa34.02■■■■□ 3.04
UBE2E3-202ENST00000410062 GPRASP1Q5JY77 1395 aa33.99■■■■□ 3.03
UBE2E3-202ENST00000410062 FMN2Q9NZ56 1722 aa33.99■■■■□ 3.03
UBE2E3-202ENST00000410062 ADGRB2O60241 1585 aa33.97■■■■□ 3.03
UBE2E3-202ENST00000410062 ORAI2Q96SN7 254 aa33.96■■■■□ 3.03
UBE2E3-202ENST00000410062 CARD11Q9BXL7 1154 aa33.96■■■■□ 3.03
UBE2E3-202ENST00000410062 CENPJQ9HC77 1338 aaPredicted RBP33.94■■■■□ 3.02
UBE2E3-202ENST00000410062 PHLPP1O60346 1717 aa33.92■■■■□ 3.02
UBE2E3-202ENST00000410062 ESCO1Q5FWF5 840 aa33.91■■■■□ 3.02
UBE2E3-202ENST00000410062 WASLO00401 505 aaPredicted RBP33.89■■■■□ 3.02
UBE2E3-202ENST00000410062 QRICH2Q9H0J4 1663 aa33.89■■■■□ 3.02
UBE2E3-202ENST00000410062 DDX17Q92841 729 aaKnown RBP33.89■■■■□ 3.02
UBE2E3-202ENST00000410062 AHDC1Q5TGY3 1603 aaPredicted RBP33.89■■■■□ 3.02
UBE2E3-202ENST00000410062 RGPD8O14715 1765 aaPredicted RBP33.88■■■■□ 3.01
UBE2E3-202ENST00000410062 EIF3AQ14152 1382 aaKnown RBP33.87■■■■□ 3.01
UBE2E3-202ENST00000410062 NHSL1Q5SYE7 1610 aa33.85■■■■□ 3.01
UBE2E3-202ENST00000410062 USP32Q8NFA0 1604 aa33.85■■■■□ 3.01
UBE2E3-202ENST00000410062 COL16A1Q07092 1604 aaPredicted RBP33.84■■■■□ 3.01
UBE2E3-202ENST00000410062 CDK19Q9BWU1 502 aa33.82■■■■□ 3
UBE2E3-202ENST00000410062 ANKARQ7Z5J8 1434 aa33.82■■■■□ 3
UBE2E3-202ENST00000410062 TULP4Q9NRJ4 1543 aa33.81■■■■□ 3
UBE2E3-202ENST00000410062 PRR36Q9H6K5 1346 aa33.81■■■■□ 3
UBE2E3-202ENST00000410062 FOXO3O43524 673 aa33.77■■■■□ 3
UBE2E3-202ENST00000410062 PHF8Q9UPP1 1060 aa33.77■■■■□ 3
UBE2E3-202ENST00000410062 KIF1AQ12756 1690 aa33.76■■■□□ 2.99
UBE2E3-202ENST00000410062 NUDT16Q96DE0 195 aaKnown RBP33.74■■■□□ 2.99
UBE2E3-202ENST00000410062 ATP7BP35670 1465 aa33.74■■■□□ 2.99
UBE2E3-202ENST00000410062 PMFBP1Q8TBY8 1022 aa33.73■■■□□ 2.99
UBE2E3-202ENST00000410062 NPHP3Q7Z494 1330 aa33.73■■■□□ 2.99
UBE2E3-202ENST00000410062 SRPK2P78362 688 aaKnown RBP33.72■■■□□ 2.99
UBE2E3-202ENST00000410062 XPCQ01831 940 aaPredicted RBP33.72■■■□□ 2.99
UBE2E3-202ENST00000410062 CABP2Q9NPB3 220 aa33.72■■■□□ 2.99
UBE2E3-202ENST00000410062 SOS2Q07890 1332 aaPredicted RBP33.71■■■□□ 2.99
UBE2E3-202ENST00000410062 EVC2Q86UK5 1308 aa33.7■■■□□ 2.99
UBE2E3-202ENST00000410062 JCADQ9P266 1359 aa33.7■■■□□ 2.98
UBE2E3-202ENST00000410062 ST20-MTHFSA0A0A6YYL1 179 aa33.68■■■□□ 2.98
UBE2E3-202ENST00000410062 LRRC59Q96AG4 307 aaKnown RBP33.68■■■□□ 2.98
UBE2E3-202ENST00000410062 USP47Q96K76 1375 aa33.68■■■□□ 2.98
UBE2E3-202ENST00000410062 PXDNQ92626 1479 aa33.68■■■□□ 2.98
UBE2E3-202ENST00000410062 ITSN1Q15811 1721 aa33.67■■■□□ 2.98
UBE2E3-202ENST00000410062 SBNO2Q9Y2G9 1366 aa33.67■■■□□ 2.98
UBE2E3-202ENST00000410062 CCDC61Q9Y6R9 512 aa33.64■■■□□ 2.98
UBE2E3-202ENST00000410062 TOPAZ1Q8N9V7 1692 aa33.64■■■□□ 2.98
UBE2E3-202ENST00000410062 KRT28Q7Z3Y7 464 aa33.63■■■□□ 2.97
UBE2E3-202ENST00000410062 SHPRHQ149N8 1683 aa33.63■■■□□ 2.97
UBE2E3-202ENST00000410062 PSME1Q06323 249 aa33.61■■■□□ 2.97
UBE2E3-202ENST00000410062 NGDNQ8NEJ9 315 aaKnown RBP33.6■■■□□ 2.97
UBE2E3-202ENST00000410062 TESK2Q96S53 571 aa33.6■■■□□ 2.97
UBE2E3-202ENST00000410062 PPIP5K1Q6PFW1 1433 aa33.59■■■□□ 2.97
UBE2E3-202ENST00000410062 MED1Q15648 1581 aaPredicted RBP33.58■■■□□ 2.97
UBE2E3-202ENST00000410062 PNPLA6Q8IY17 1366 aa33.58■■■□□ 2.97
UBE2E3-202ENST00000410062 PLEKHG3A1L390 1219 aa33.55■■■□□ 2.96
UBE2E3-202ENST00000410062 CABP1Q9NZU7 370 aa33.54■■■□□ 2.96
UBE2E3-202ENST00000410062 ACEP12821 1306 aa33.53■■■□□ 2.96
UBE2E3-202ENST00000410062 SPATA31A6Q5VVP1 1343 aa33.53■■■□□ 2.96
UBE2E3-202ENST00000410062 SPATA31A3Q5VYP0 1347 aa33.52■■■□□ 2.96
UBE2E3-202ENST00000410062 POLR3AO14802 1390 aaPredicted RBP33.52■■■□□ 2.96
UBE2E3-202ENST00000410062 NUTM2BA6NNL0 878 aaPredicted RBP33.51■■■□□ 2.95
UBE2E3-202ENST00000410062 NUTM2EB1AL46 878 aaPredicted RBP33.51■■■□□ 2.95
UBE2E3-202ENST00000410062 NUTM2AQ8IVF1 878 aaPredicted RBP33.51■■■□□ 2.95
UBE2E3-202ENST00000410062 SBNO1A3KN83 1393 aa33.49■■■□□ 2.95
UBE2E3-202ENST00000410062 ATAD2Q6PL18 1390 aa33.49■■■□□ 2.95
UBE2E3-202ENST00000410062 TRPM3Q9HCF6 1732 aaPredicted RBP33.49■■■□□ 2.95
UBE2E3-202ENST00000410062 LRP6O75581 1613 aa33.49■■■□□ 2.95
UBE2E3-202ENST00000410062 TNS3Q68CZ2 1445 aa33.48■■■□□ 2.95
UBE2E3-202ENST00000410062 SLC24A1O60721 1099 aa33.47■■■□□ 2.95
UBE2E3-202ENST00000410062 LMOD2Q6P5Q4 547 aa33.47■■■□□ 2.95
UBE2E3-202ENST00000410062 DISP3Q9P2K9 1392 aa33.46■■■□□ 2.95
UBE2E3-202ENST00000410062 EIF4G2P78344 907 aaKnown RBP eCLIP33.46■■■□□ 2.95
UBE2E3-202ENST00000410062 COL22A1Q8NFW1 1626 aaPredicted RBP33.45■■■□□ 2.95
UBE2E3-202ENST00000410062 PAK3O75914 559 aaPredicted RBP33.44■■■□□ 2.94
UBE2E3-202ENST00000410062 TMF1P82094 1093 aa33.44■■■□□ 2.94
UBE2E3-202ENST00000410062 HSPA5P11021 654 aaKnown RBP33.43■■■□□ 2.94
UBE2E3-202ENST00000410062 PUS7Q96PZ0 661 aaKnown RBP33.41■■■□□ 2.94
UBE2E3-202ENST00000410062 TMC1Q8TDI8 760 aa33.4■■■□□ 2.94
UBE2E3-202ENST00000410062 ALS2Q96Q42 1657 aa33.4■■■□□ 2.94
UBE2E3-202ENST00000410062 PLEKHG5O94827 1062 aa33.39■■■□□ 2.94
UBE2E3-202ENST00000410062 MEX3CQ5U5Q3 659 aaKnown RBP33.39■■■□□ 2.94
UBE2E3-202ENST00000410062 ARHGEF10O15013 1369 aa33.39■■■□□ 2.94
UBE2E3-202ENST00000410062 PHF23Q9BUL5 403 aaPredicted RBP33.38■■■□□ 2.93
UBE2E3-202ENST00000410062 SLC12A5Q9H2X9 1139 aa33.37■■■□□ 2.93
UBE2E3-202ENST00000410062 USP6P35125 1406 aa33.35■■■□□ 2.93
UBE2E3-202ENST00000410062 ADAMTS2O95450 1211 aa33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms