RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 DMRT2Q9Y5R5 561 aa21.6■■□□□ 1.05
LIMS2-208ENST00000410011 QRICH2Q9H0J4 1663 aa21.6■■□□□ 1.05
LIMS2-208ENST00000410011 CCDC27Q2M243 656 aa21.6■■□□□ 1.05
LIMS2-208ENST00000410011 LAS1LQ9Y4W2 734 aaKnown RBP21.6■■□□□ 1.05
LIMS2-208ENST00000410011 POGZQ7Z3K3 1410 aa21.59■■□□□ 1.05
LIMS2-208ENST00000410011 WDR63Q8IWG1 891 aa21.59■■□□□ 1.05
LIMS2-208ENST00000410011 FRMPD1Q5SYB0 1578 aa21.59■■□□□ 1.05
LIMS2-208ENST00000410011 IQSEC2Q5JU85 1478 aa21.59■■□□□ 1.05
LIMS2-208ENST00000410011 NSD2O96028 1365 aa21.57■■□□□ 1.04
LIMS2-208ENST00000410011 HECW2Q9P2P5 1572 aa21.57■■□□□ 1.04
LIMS2-208ENST00000410011 TRAK1Q9UPV9 953 aa21.56■■□□□ 1.04
LIMS2-208ENST00000410011 SLC12A5Q9H2X9 1139 aa21.56■■□□□ 1.04
LIMS2-208ENST00000410011 CLUAP1Q96AJ1 413 aa21.55■■□□□ 1.04
LIMS2-208ENST00000410011 MAPK8IP3Q9UPT6 1336 aa21.55■■□□□ 1.04
LIMS2-208ENST00000410011 ZMYM3Q14202 1370 aa21.54■■□□□ 1.04
LIMS2-208ENST00000410011 ABCC3O15438 1527 aa21.54■■□□□ 1.04
LIMS2-208ENST00000410011 IGHDP01880 384 aa21.53■■□□□ 1.04
LIMS2-208ENST00000410011 DAXXQ9UER7 740 aaPredicted RBP21.53■■□□□ 1.04
LIMS2-208ENST00000410011 CD109Q6YHK3 1445 aa21.53■■□□□ 1.04
LIMS2-208ENST00000410011 CFAP53Q96M91 514 aa21.52■■□□□ 1.04
LIMS2-208ENST00000410011 RARSP54136 660 aaKnown RBP21.52■■□□□ 1.04
LIMS2-208ENST00000410011 TCP11L2Q8N4U5 519 aa21.52■■□□□ 1.04
LIMS2-208ENST00000410011 ANKRD36BQ8N2N9 1353 aa21.51■■□□□ 1.03
LIMS2-208ENST00000410011 PIK3C2BO00750 1634 aa21.51■■□□□ 1.03
LIMS2-208ENST00000410011 CHGAP10645 457 aaKnown RBP21.51■■□□□ 1.03
LIMS2-208ENST00000410011 RGS3P49796 1198 aa21.51■■□□□ 1.03
LIMS2-208ENST00000410011 VIRMAQ69YN4 1812 aaKnown RBP21.5■■□□□ 1.03
LIMS2-208ENST00000410011 EVC2Q86UK5 1308 aa21.5■■□□□ 1.03
LIMS2-208ENST00000410011 VGFO15240 615 aaPredicted RBP21.5■■□□□ 1.03
LIMS2-208ENST00000410011 NPM1P06748 294 aaKnown RBP eCLIP21.5■■□□□ 1.03
LIMS2-208ENST00000410011 GLI2P10070 1586 aa21.49■■□□□ 1.03
LIMS2-208ENST00000410011 ZFYVE9O95405 1425 aa21.49■■□□□ 1.03
LIMS2-208ENST00000410011 ARHGAP31Q2M1Z3 1444 aa21.49■■□□□ 1.03
LIMS2-208ENST00000410011 MTHFSP49914 203 aa21.49■■□□□ 1.03
LIMS2-208ENST00000410011 PMFBP1Q8TBY8 1022 aa21.49■■□□□ 1.03
LIMS2-208ENST00000410011 CAMSAP1Q5T5Y3 1602 aa21.47■■□□□ 1.03
LIMS2-208ENST00000410011 CANXP27824 592 aaKnown RBP21.47■■□□□ 1.03
LIMS2-208ENST00000410011 NFKBIBQ15653 356 aa21.47■■□□□ 1.03
LIMS2-208ENST00000410011 TMEM132EQ6IEE7 984 aa21.47■■□□□ 1.03
LIMS2-208ENST00000410011 GGT6Q6P531 493 aa21.47■■□□□ 1.03
LIMS2-208ENST00000410011 CT47B1P0C2W7 299 aaPredicted RBP21.46■■□□□ 1.03
LIMS2-208ENST00000410011 COG6Q9Y2V7 657 aa21.46■■□□□ 1.03
LIMS2-208ENST00000410011 ARHGEF28Q8N1W1 1705 aaKnown RBP21.46■■□□□ 1.03
LIMS2-208ENST00000410011 NEXMIFQ5QGS0 1516 aa21.46■■□□□ 1.03
LIMS2-208ENST00000410011 PANK1Q8TE04 598 aa21.46■■□□□ 1.03
LIMS2-208ENST00000410011 TULP4Q9NRJ4 1543 aa21.46■■□□□ 1.03
LIMS2-208ENST00000410011 MYH16Q9H6N6 1097 aa21.45■■□□□ 1.02
LIMS2-208ENST00000410011 NEO1Q92859 1461 aa21.45■■□□□ 1.02
LIMS2-208ENST00000410011 ADGRB2O60241 1585 aa21.44■■□□□ 1.02
LIMS2-208ENST00000410011 USP19O94966 1318 aa21.43■■□□□ 1.02
LIMS2-208ENST00000410011 SIGLEC1Q9BZZ2 1709 aa21.42■■□□□ 1.02
LIMS2-208ENST00000410011 CFAP65Q6ZU64 1925 aaKnown RBP21.42■■□□□ 1.02
LIMS2-208ENST00000410011 TNNT2P45379 298 aaPredicted RBP21.41■■□□□ 1.02
LIMS2-208ENST00000410011 SLC4A3P48751 1232 aa21.41■■□□□ 1.02
LIMS2-208ENST00000410011 GSE1Q14687 1217 aa21.4■■□□□ 1.02
LIMS2-208ENST00000410011 NEUROD2Q15784 382 aa21.4■■□□□ 1.02
LIMS2-208ENST00000410011 RRP7AQ9Y3A4 280 aaKnown RBP21.4■■□□□ 1.02
LIMS2-208ENST00000410011 FRAT1Q92837 279 aaPredicted RBP21.4■■□□□ 1.02
LIMS2-208ENST00000410011 ABCC11Q96J66 1382 aa21.4■■□□□ 1.02
LIMS2-208ENST00000410011 SLC52A1Q9NWF4 448 aa21.39■■□□□ 1.02
LIMS2-208ENST00000410011 MED14O60244 1454 aa21.38■■□□□ 1.01
LIMS2-208ENST00000410011 RLBP1P12271 317 aa21.37■■□□□ 1.01
LIMS2-208ENST00000410011 RWDD1Q9H446 243 aaPredicted RBP21.37■■□□□ 1.01
LIMS2-208ENST00000410011 PCDHB15Q9Y5E8 787 aa21.37■■□□□ 1.01
LIMS2-208ENST00000410011 U2AF1L5P0DN76 240 aaPredicted RBP21.35■■□□□ 1.01
LIMS2-208ENST00000410011 U2AF1Q01081 240 aaKnown RBP eCLIP21.35■■□□□ 1.01
LIMS2-208ENST00000410011 DIP2CQ9Y2E4 1556 aa21.35■■□□□ 1.01
LIMS2-208ENST00000410011 PLEKHF1Q96S99 279 aa21.34■■□□□ 1.01
LIMS2-208ENST00000410011 NLRP1Q9C000 1473 aa21.34■■□□□ 1.01
LIMS2-208ENST00000410011 IL16Q14005 1332 aa21.34■■□□□ 1.01
LIMS2-208ENST00000410011 MVPQ14764 893 aaKnown RBP21.34■■□□□ 1.01
LIMS2-208ENST00000410011 ATAD2Q6PL18 1390 aa21.34■■□□□ 1.01
LIMS2-208ENST00000410011 IDI1Q13907 227 aa21.33■■□□□ 1
LIMS2-208ENST00000410011 BECN1Q14457 450 aa21.33■■□□□ 1
LIMS2-208ENST00000410011 ZKSCAN2Q63HK3 967 aa21.33■■□□□ 1
LIMS2-208ENST00000410011 CABP2Q9NPB3 220 aa21.33■■□□□ 1
LIMS2-208ENST00000410011 A0A1W2PP64 1363 aa21.33■■□□□ 1
LIMS2-208ENST00000410011 COL3A1P02461 1466 aaPredicted RBP21.33■■□□□ 1
LIMS2-208ENST00000410011 SEC24BO95487 1268 aa21.3■■□□□ 1
LIMS2-208ENST00000410011 OSCARQ8IYS5 282 aa21.3■■□□□ 1
LIMS2-208ENST00000410011 PDZRN3Q9UPQ7 1066 aa21.3■■□□□ 1
LIMS2-208ENST00000410011 CLTCQ00610 1675 aaKnown RBP21.3■■□□□ 1
LIMS2-208ENST00000410011 ANKRD26Q9UPS8 1709 aa21.3■■□□□ 1
LIMS2-208ENST00000410011 DZIP1LQ8IYY4 767 aaKnown RBP21.29■■□□□ 1
LIMS2-208ENST00000410011 PTPRMP28827 1452 aa21.29■■□□□ 1
LIMS2-208ENST00000410011 TERF2IPQ9NYB0 399 aa21.29■■□□□ 1
LIMS2-208ENST00000410011 TMPOP42166 694 aaKnown RBP21.28■■□□□ 1
LIMS2-208ENST00000410011 UPF2Q9HAU5 1272 aaKnown RBP21.28■■□□□ 1
LIMS2-208ENST00000410011 TNNQ9UQP3 1299 aa21.28■■□□□ 1
LIMS2-208ENST00000410011 PNNQ9H307 717 aaKnown RBP21.28■■□□□ 1
LIMS2-208ENST00000410011 PNPLA6Q8IY17 1366 aa21.28■■□□□ 1
LIMS2-208ENST00000410011 RAPGEF3O95398 923 aa21.27■■□□□ 1
LIMS2-208ENST00000410011 TBC1D32Q96NH3 1257 aa21.27■■□□□ 1
LIMS2-208ENST00000410011 TMEM131LA2VDJ0 1609 aa21.27■■□□□ 1
LIMS2-208ENST00000410011 HDAC1Q13547 482 aaPredicted RBP21.27■□□□□ 0.99
LIMS2-208ENST00000410011 TRIM35Q9UPQ4 493 aa21.27■□□□□ 0.99
LIMS2-208ENST00000410011 BCL2L13Q9BXK5 485 aa21.26■□□□□ 0.99
LIMS2-208ENST00000410011 CD163L1Q9NR16 1453 aa21.26■□□□□ 0.99
LIMS2-208ENST00000410011 FYB1O15117 783 aa21.26■□□□□ 0.99
LIMS2-208ENST00000410011 FRAT2O75474 233 aaPredicted RBP21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms