RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 FAM135BQ49AJ0 1406 aa17.48■□□□□ 0.39
PMS1-204ENST00000409823 C14orf37Q86TY3 774 aa17.48■□□□□ 0.39
PMS1-204ENST00000409823 PROSER2Q86WR7 435 aaPredicted RBP17.48■□□□□ 0.39
PMS1-204ENST00000409823 CHD2O14647 1828 aaKnown RBP17.47■□□□□ 0.39
PMS1-204ENST00000409823 XRN1Q8IZH2 1706 aaKnown RBP17.47■□□□□ 0.39
PMS1-204ENST00000409823 SIRT1Q96EB6 747 aa17.47■□□□□ 0.39
PMS1-204ENST00000409823 CDK19Q9BWU1 502 aa17.47■□□□□ 0.39
PMS1-204ENST00000409823 EVC2Q86UK5 1308 aa17.47■□□□□ 0.39
PMS1-204ENST00000409823 PTCH1Q13635 1447 aa17.47■□□□□ 0.39
PMS1-204ENST00000409823 DMRT2Q9Y5R5 561 aa17.46■□□□□ 0.39
PMS1-204ENST00000409823 SBNO2Q9Y2G9 1366 aa17.46■□□□□ 0.39
PMS1-204ENST00000409823 KNDC1Q76NI1 1749 aa17.46■□□□□ 0.38
PMS1-204ENST00000409823 DIEXFQ68CQ4 756 aaKnown RBP17.45■□□□□ 0.38
PMS1-204ENST00000409823 TULP4Q9NRJ4 1543 aa17.45■□□□□ 0.38
PMS1-204ENST00000409823 CNGB1Q14028 1251 aaPredicted RBP17.45■□□□□ 0.38
PMS1-204ENST00000409823 TMC1Q8TDI8 760 aa17.45■□□□□ 0.38
PMS1-204ENST00000409823 WASLO00401 505 aaPredicted RBP17.43■□□□□ 0.38
PMS1-204ENST00000409823 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.43■□□□□ 0.38
PMS1-204ENST00000409823 CDCA8Q53HL2 280 aa17.43■□□□□ 0.38
PMS1-204ENST00000409823 STRCP1A6NGW2 1772 aa17.42■□□□□ 0.38
PMS1-204ENST00000409823 SLC24A1O60721 1099 aa17.41■□□□□ 0.38
PMS1-204ENST00000409823 SLC12A5Q9H2X9 1139 aa17.41■□□□□ 0.38
PMS1-204ENST00000409823 TMEM94Q12767 1356 aa17.41■□□□□ 0.38
PMS1-204ENST00000409823 NWD1Q149M9 1564 aa17.39■□□□□ 0.37
PMS1-204ENST00000409823 PANK3Q9H999 370 aa17.38■□□□□ 0.37
PMS1-204ENST00000409823 NUDT16Q96DE0 195 aaKnown RBP17.37■□□□□ 0.37
PMS1-204ENST00000409823 CABP1Q9NZU7 370 aa17.37■□□□□ 0.37
PMS1-204ENST00000409823 NKTRP30414 1462 aaKnown RBP17.37■□□□□ 0.37
PMS1-204ENST00000409823 PRR36Q9H6K5 1346 aa17.37■□□□□ 0.37
PMS1-204ENST00000409823 NALCNQ8IZF0 1738 aa17.35■□□□□ 0.37
PMS1-204ENST00000409823 ADGRL3Q9HAR2 1447 aa17.34■□□□□ 0.37
PMS1-204ENST00000409823 C19orf44Q9H6X5 657 aa17.34■□□□□ 0.37
PMS1-204ENST00000409823 PMFBP1Q8TBY8 1022 aa17.33■□□□□ 0.36
PMS1-204ENST00000409823 LRRC7Q96NW7 1537 aa17.33■□□□□ 0.36
PMS1-204ENST00000409823 CCDC61Q9Y6R9 512 aa17.33■□□□□ 0.36
PMS1-204ENST00000409823 ATAD2Q6PL18 1390 aa17.32■□□□□ 0.36
PMS1-204ENST00000409823 PPIP5K1Q6PFW1 1433 aa17.31■□□□□ 0.36
PMS1-204ENST00000409823 ATF3P18847 181 aa17.31■□□□□ 0.36
PMS1-204ENST00000409823 ADGRB2O60241 1585 aa17.31■□□□□ 0.36
PMS1-204ENST00000409823 ATP7BP35670 1465 aa17.3■□□□□ 0.36
PMS1-204ENST00000409823 CARD14Q9BXL6 1004 aa17.3■□□□□ 0.36
PMS1-204ENST00000409823 MYOM1P52179 1685 aa17.3■□□□□ 0.36
PMS1-204ENST00000409823 PUS7Q96PZ0 661 aaKnown RBP17.3■□□□□ 0.36
PMS1-204ENST00000409823 ESCO1Q5FWF5 840 aa17.29■□□□□ 0.36
PMS1-204ENST00000409823 ORAI2Q96SN7 254 aa17.28■□□□□ 0.36
PMS1-204ENST00000409823 MSH6P52701 1360 aa17.28■□□□□ 0.36
PMS1-204ENST00000409823 A0A1W2PP64 1363 aa17.28■□□□□ 0.36
PMS1-204ENST00000409823 PER1O15534 1290 aaPredicted RBP17.28■□□□□ 0.36
PMS1-204ENST00000409823 CC2D1BQ5T0F9 858 aaKnown RBP17.27■□□□□ 0.36
PMS1-204ENST00000409823 MIER1Q8N108 512 aa17.27■□□□□ 0.36
PMS1-204ENST00000409823 KNSTRNQ9Y448 316 aa17.27■□□□□ 0.35
PMS1-204ENST00000409823 CDC42BPGQ6DT37 1551 aa17.26■□□□□ 0.35
PMS1-204ENST00000409823 TERF2IPQ9NYB0 399 aa17.26■□□□□ 0.35
PMS1-204ENST00000409823 USP32Q8NFA0 1604 aa17.26■□□□□ 0.35
PMS1-204ENST00000409823 ACEP12821 1306 aa17.26■□□□□ 0.35
PMS1-204ENST00000409823 RGPD8O14715 1765 aaPredicted RBP17.25■□□□□ 0.35
PMS1-204ENST00000409823 XIRP1Q702N8 1843 aaKnown RBP17.25■□□□□ 0.35
PMS1-204ENST00000409823 NGDNQ8NEJ9 315 aaKnown RBP17.25■□□□□ 0.35
PMS1-204ENST00000409823 CADPS2Q86UW7 1296 aa17.25■□□□□ 0.35
PMS1-204ENST00000409823 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.25■□□□□ 0.35
PMS1-204ENST00000409823 CD163L1Q9NR16 1453 aa17.24■□□□□ 0.35
PMS1-204ENST00000409823 HDGFL2Q7Z4V5 671 aaPredicted RBP17.24■□□□□ 0.35
PMS1-204ENST00000409823 ANKRD36BQ8N2N9 1353 aa17.24■□□□□ 0.35
PMS1-204ENST00000409823 NSD3Q9BZ95 1437 aa17.24■□□□□ 0.35
PMS1-204ENST00000409823 LTBP4Q8N2S1 1624 aa17.24■□□□□ 0.35
PMS1-204ENST00000409823 FMN2Q9NZ56 1722 aa17.23■□□□□ 0.35
PMS1-204ENST00000409823 ANP32CO43423 234 aa17.23■□□□□ 0.35
PMS1-204ENST00000409823 XPCQ01831 940 aaPredicted RBP17.23■□□□□ 0.35
PMS1-204ENST00000409823 NCOA3Q9Y6Q9 1424 aa17.23■□□□□ 0.35
PMS1-204ENST00000409823 FOXO3O43524 673 aa17.23■□□□□ 0.35
PMS1-204ENST00000409823 DDX17Q92841 729 aaKnown RBP17.23■□□□□ 0.35
PMS1-204ENST00000409823 PHF8Q9UPP1 1060 aa17.23■□□□□ 0.35
PMS1-204ENST00000409823 KTN1Q86UP2 1357 aaKnown RBP17.22■□□□□ 0.35
PMS1-204ENST00000409823 NINLQ9Y2I6 1382 aa17.22■□□□□ 0.35
PMS1-204ENST00000409823 PLEKHG3A1L390 1219 aa17.22■□□□□ 0.35
PMS1-204ENST00000409823 C1orf167Q5SNV9 1468 aa17.21■□□□□ 0.35
PMS1-204ENST00000409823 ANKARQ7Z5J8 1434 aa17.21■□□□□ 0.35
PMS1-204ENST00000409823 SLAIN2Q9P270 581 aa17.21■□□□□ 0.35
PMS1-204ENST00000409823 MST1RQ04912 1400 aa17.2■□□□□ 0.34
PMS1-204ENST00000409823 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
PMS1-204ENST00000409823 DCCP43146 1447 aa17.18■□□□□ 0.34
PMS1-204ENST00000409823 CPSF1Q10570 1443 aaKnown RBP17.18■□□□□ 0.34
PMS1-204ENST00000409823 GGNBP2Q9H3C7 697 aa17.18■□□□□ 0.34
PMS1-204ENST00000409823 PAK3O75914 559 aaPredicted RBP17.18■□□□□ 0.34
PMS1-204ENST00000409823 TNNT2P45379 298 aaPredicted RBP17.18■□□□□ 0.34
PMS1-204ENST00000409823 PRKRIP1Q9H875 184 aaPredicted RBP17.18■□□□□ 0.34
PMS1-204ENST00000409823 TOPAZ1Q8N9V7 1692 aa17.18■□□□□ 0.34
PMS1-204ENST00000409823 PSME1Q06323 249 aa17.17■□□□□ 0.34
PMS1-204ENST00000409823 PLEKHG5O94827 1062 aa17.17■□□□□ 0.34
PMS1-204ENST00000409823 ZNF692Q9BU19 519 aaPredicted RBP17.17■□□□□ 0.34
PMS1-204ENST00000409823 ZRANB1Q9UGI0 708 aa17.17■□□□□ 0.34
PMS1-204ENST00000409823 CGNL1Q0VF96 1302 aa17.16■□□□□ 0.34
PMS1-204ENST00000409823 NME9Q86XW9 330 aa17.16■□□□□ 0.34
PMS1-204ENST00000409823 BRINP3Q76B58 766 aa17.16■□□□□ 0.34
PMS1-204ENST00000409823 FYB1O15117 783 aa17.15■□□□□ 0.34
PMS1-204ENST00000409823 NUTM2GQ5VZR2 741 aa17.15■□□□□ 0.34
PMS1-204ENST00000409823 POLR3AO14802 1390 aaPredicted RBP17.15■□□□□ 0.34
PMS1-204ENST00000409823 USP6P35125 1406 aa17.14■□□□□ 0.33
PMS1-204ENST00000409823 ITSN1Q15811 1721 aa17.14■□□□□ 0.33
PMS1-204ENST00000409823 PIP4K2BP78356 416 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms