RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 YTHDC2Q9H6S0 1430 aaKnown RBP23.44■■□□□ 1.34
TSPAN4-208ENST00000409531 ROCK2O75116 1388 aaKnown RBP23.44■■□□□ 1.34
TSPAN4-208ENST00000409531 TECPR2O15040 1411 aa23.44■■□□□ 1.34
TSPAN4-208ENST00000409531 WAPLQ7Z5K2 1190 aa23.43■■□□□ 1.34
TSPAN4-208ENST00000409531 ASXL1Q8IXJ9 1541 aa23.43■■□□□ 1.34
TSPAN4-208ENST00000409531 GPRASP1Q5JY77 1395 aa23.4■■□□□ 1.34
TSPAN4-208ENST00000409531 ADGRB1O14514 1584 aa23.39■■□□□ 1.34
TSPAN4-208ENST00000409531 NBPF1Q3BBV0 1214 aa23.38■■□□□ 1.33
TSPAN4-208ENST00000409531 ROBO1Q9Y6N7 1651 aa23.38■■□□□ 1.33
TSPAN4-208ENST00000409531 CARD11Q9BXL7 1154 aa23.37■■□□□ 1.33
TSPAN4-208ENST00000409531 MST1RQ04912 1400 aa23.37■■□□□ 1.33
TSPAN4-208ENST00000409531 BRINP3Q76B58 766 aa23.36■■□□□ 1.33
TSPAN4-208ENST00000409531 PLEKHH1Q9ULM0 1364 aa23.35■■□□□ 1.33
TSPAN4-208ENST00000409531 NALCNQ8IZF0 1738 aa23.35■■□□□ 1.33
TSPAN4-208ENST00000409531 TRAK1Q9UPV9 953 aa23.34■■□□□ 1.33
TSPAN4-208ENST00000409531 PRAM1Q96QH2 718 aa23.33■■□□□ 1.33
TSPAN4-208ENST00000409531 POGKQ9P215 609 aa23.33■■□□□ 1.33
TSPAN4-208ENST00000409531 KNDC1Q76NI1 1749 aa23.33■■□□□ 1.33
TSPAN4-208ENST00000409531 C1orf167Q5SNV9 1468 aa23.3■■□□□ 1.32
TSPAN4-208ENST00000409531 EIF3AQ14152 1382 aaKnown RBP23.3■■□□□ 1.32
TSPAN4-208ENST00000409531 DLC1Q96QB1 1528 aa23.29■■□□□ 1.32
TSPAN4-208ENST00000409531 SAFB2Q14151 953 aaKnown RBP eCLIP23.29■■□□□ 1.32
TSPAN4-208ENST00000409531 ARHGEF28Q8N1W1 1705 aaKnown RBP23.28■■□□□ 1.32
TSPAN4-208ENST00000409531 ORAI2Q96SN7 254 aa23.28■■□□□ 1.32
TSPAN4-208ENST00000409531 RGS17Q9UGC6 210 aaPredicted RBP23.28■■□□□ 1.32
TSPAN4-208ENST00000409531 USP47Q96K76 1375 aa23.26■■□□□ 1.31
TSPAN4-208ENST00000409531 EIF4G2P78344 907 aaKnown RBP eCLIP23.26■■□□□ 1.31
TSPAN4-208ENST00000409531 CDC42BPGQ6DT37 1551 aa23.24■■□□□ 1.31
TSPAN4-208ENST00000409531 NUTM2FA1L443 756 aa23.24■■□□□ 1.31
TSPAN4-208ENST00000409531 ESCO1Q5FWF5 840 aa23.24■■□□□ 1.31
TSPAN4-208ENST00000409531 PHLPP1O60346 1717 aa23.24■■□□□ 1.31
TSPAN4-208ENST00000409531 AHDC1Q5TGY3 1603 aaPredicted RBP23.22■■□□□ 1.31
TSPAN4-208ENST00000409531 JCADQ9P266 1359 aa23.22■■□□□ 1.31
TSPAN4-208ENST00000409531 DDX17Q92841 729 aaKnown RBP23.21■■□□□ 1.31
TSPAN4-208ENST00000409531 LRRC59Q96AG4 307 aaKnown RBP23.2■■□□□ 1.3
TSPAN4-208ENST00000409531 MINK1Q8N4C8 1332 aaPredicted RBP23.2■■□□□ 1.3
TSPAN4-208ENST00000409531 HIRIP3Q9BW71 556 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-208ENST00000409531 COL16A1Q07092 1604 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-208ENST00000409531 CENPJQ9HC77 1338 aaPredicted RBP23.19■■□□□ 1.3
TSPAN4-208ENST00000409531 QRICH2Q9H0J4 1663 aa23.18■■□□□ 1.3
TSPAN4-208ENST00000409531 HSPA5P11021 654 aaKnown RBP23.17■■□□□ 1.3
TSPAN4-208ENST00000409531 WASLO00401 505 aaPredicted RBP23.16■■□□□ 1.3
TSPAN4-208ENST00000409531 FOXO3O43524 673 aa23.16■■□□□ 1.3
TSPAN4-208ENST00000409531 SLC24A1O60721 1099 aa23.16■■□□□ 1.3
TSPAN4-208ENST00000409531 SOS2Q07890 1332 aaPredicted RBP23.16■■□□□ 1.3
TSPAN4-208ENST00000409531 ST20-MTHFSA0A0A6YYL1 179 aa23.15■■□□□ 1.3
TSPAN4-208ENST00000409531 NPHP3Q7Z494 1330 aa23.15■■□□□ 1.3
TSPAN4-208ENST00000409531 NHSL1Q5SYE7 1610 aa23.14■■□□□ 1.3
TSPAN4-208ENST00000409531 SBNO2Q9Y2G9 1366 aa23.14■■□□□ 1.29
TSPAN4-208ENST00000409531 SPATA31A6Q5VVP1 1343 aa23.13■■□□□ 1.29
TSPAN4-208ENST00000409531 FMN2Q9NZ56 1722 aa23.13■■□□□ 1.29
TSPAN4-208ENST00000409531 PHF8Q9UPP1 1060 aa23.12■■□□□ 1.29
TSPAN4-208ENST00000409531 POTEAQ6S8J7 498 aa23.11■■□□□ 1.29
TSPAN4-208ENST00000409531 ADGRB2O60241 1585 aa23.1■■□□□ 1.29
TSPAN4-208ENST00000409531 ANKARQ7Z5J8 1434 aa23.1■■□□□ 1.29
TSPAN4-208ENST00000409531 CDK19Q9BWU1 502 aa23.08■■□□□ 1.29
TSPAN4-208ENST00000409531 TESK2Q96S53 571 aa23.08■■□□□ 1.28
TSPAN4-208ENST00000409531 XPCQ01831 940 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-208ENST00000409531 PRR36Q9H6K5 1346 aa23.06■■□□□ 1.28
TSPAN4-208ENST00000409531 KRT28Q7Z3Y7 464 aa23.06■■□□□ 1.28
TSPAN4-208ENST00000409531 PMFBP1Q8TBY8 1022 aa23.06■■□□□ 1.28
TSPAN4-208ENST00000409531 PNPLA6Q8IY17 1366 aa23.05■■□□□ 1.28
TSPAN4-208ENST00000409531 TMF1P82094 1093 aa23.05■■□□□ 1.28
TSPAN4-208ENST00000409531 NUDT16Q96DE0 195 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-208ENST00000409531 SHPRHQ149N8 1683 aa23.04■■□□□ 1.28
TSPAN4-208ENST00000409531 RGPD8O14715 1765 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-208ENST00000409531 EVC2Q86UK5 1308 aa23.04■■□□□ 1.28
TSPAN4-208ENST00000409531 NUTM2BA6NNL0 878 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-208ENST00000409531 NUTM2EB1AL46 878 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-208ENST00000409531 PSME1Q06323 249 aa23.04■■□□□ 1.28
TSPAN4-208ENST00000409531 NUTM2AQ8IVF1 878 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-208ENST00000409531 TULP4Q9NRJ4 1543 aa23.03■■□□□ 1.28
TSPAN4-208ENST00000409531 PXDNQ92626 1479 aa23.02■■□□□ 1.28
TSPAN4-208ENST00000409531 CDCA8Q53HL2 280 aa23.02■■□□□ 1.28
TSPAN4-208ENST00000409531 KIF1AQ12756 1690 aa23.01■■□□□ 1.27
TSPAN4-208ENST00000409531 MEX3CQ5U5Q3 659 aaKnown RBP23.01■■□□□ 1.27
TSPAN4-208ENST00000409531 CCDC61Q9Y6R9 512 aa23.01■■□□□ 1.27
TSPAN4-208ENST00000409531 USP32Q8NFA0 1604 aa23.01■■□□□ 1.27
TSPAN4-208ENST00000409531 SPATA31A3Q5VYP0 1347 aa22.99■■□□□ 1.27
TSPAN4-208ENST00000409531 SRPK2P78362 688 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-208ENST00000409531 NGDNQ8NEJ9 315 aaKnown RBP22.99■■□□□ 1.27
TSPAN4-208ENST00000409531 LRP6O75581 1613 aa22.98■■□□□ 1.27
TSPAN4-208ENST00000409531 PUS7Q96PZ0 661 aaKnown RBP22.97■■□□□ 1.27
TSPAN4-208ENST00000409531 ZNF316A6NFI3 1004 aaPredicted RBP22.96■■□□□ 1.27
TSPAN4-208ENST00000409531 CABP2Q9NPB3 220 aa22.96■■□□□ 1.27
TSPAN4-208ENST00000409531 ATP7BP35670 1465 aa22.96■■□□□ 1.27
TSPAN4-208ENST00000409531 PLEKHG3A1L390 1219 aa22.95■■□□□ 1.26
TSPAN4-208ENST00000409531 SBNO1A3KN83 1393 aa22.95■■□□□ 1.26
TSPAN4-208ENST00000409531 ATAD2Q6PL18 1390 aa22.92■■□□□ 1.26
TSPAN4-208ENST00000409531 ADAMTS2O95450 1211 aa22.92■■□□□ 1.26
TSPAN4-208ENST00000409531 ITSN1Q15811 1721 aa22.92■■□□□ 1.26
TSPAN4-208ENST00000409531 LMOD2Q6P5Q4 547 aa22.91■■□□□ 1.26
TSPAN4-208ENST00000409531 ZNF772Q68DY9 489 aaPredicted RBP22.9■■□□□ 1.26
TSPAN4-208ENST00000409531 ACEP12821 1306 aa22.9■■□□□ 1.26
TSPAN4-208ENST00000409531 KIF7Q2M1P5 1343 aa22.9■■□□□ 1.26
TSPAN4-208ENST00000409531 CCDC7Q96M83 1385 aa22.9■■□□□ 1.26
TSPAN4-208ENST00000409531 TNS3Q68CZ2 1445 aa22.89■■□□□ 1.26
TSPAN4-208ENST00000409531 C11orf95C9JLR9 678 aaPredicted RBP22.89■■□□□ 1.26
TSPAN4-208ENST00000409531 C8orf37Q96NL8 207 aa22.89■■□□□ 1.26
TSPAN4-208ENST00000409531 COL22A1Q8NFW1 1626 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms