RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 WWC2Q6AWC2 1192 aa16.54■□□□□ 0.24
AFF3-202ENST00000409236 SDF4Q9BRK5 362 aa16.53■□□□□ 0.24
AFF3-202ENST00000409236 TERF2IPQ9NYB0 399 aa16.53■□□□□ 0.24
AFF3-202ENST00000409236 KIF2AO00139 706 aaPredicted RBP16.53■□□□□ 0.24
AFF3-202ENST00000409236 NLRP13Q86W25 1043 aa16.52■□□□□ 0.24
AFF3-202ENST00000409236 GBP3Q9H0R5 595 aa16.52■□□□□ 0.24
AFF3-202ENST00000409236 STIM1Q13586 685 aa16.52■□□□□ 0.24
AFF3-202ENST00000409236 DACH1Q9UI36 760 aa16.52■□□□□ 0.23
AFF3-202ENST00000409236 FBXW7Q969H0 707 aa16.52■□□□□ 0.23
AFF3-202ENST00000409236 TMCO3Q6UWJ1 677 aa16.51■□□□□ 0.23
AFF3-202ENST00000409236 SEPT6Q14141 434 aa16.51■□□□□ 0.23
AFF3-202ENST00000409236 PSMA5P28066 241 aa16.51■□□□□ 0.23
AFF3-202ENST00000409236 PAF1Q8N7H5 531 aa16.51■□□□□ 0.23
AFF3-202ENST00000409236 SOX12O15370 315 aa16.51■□□□□ 0.23
AFF3-202ENST00000409236 ZBED9Q6R2W3 1325 aa16.51■□□□□ 0.23
AFF3-202ENST00000409236 CCDC175P0C221 793 aa16.51■□□□□ 0.23
AFF3-202ENST00000409236 MAP2K1Q02750 393 aaPredicted RBP16.51■□□□□ 0.23
AFF3-202ENST00000409236 CBFA2T2O43439 604 aa16.5■□□□□ 0.23
AFF3-202ENST00000409236 ERICH4A6NGS2 130 aa16.5■□□□□ 0.23
AFF3-202ENST00000409236 DDX19BQ9UMR2 479 aa16.5■□□□□ 0.23
AFF3-202ENST00000409236 ANKRD18BA2A2Z9 1011 aa16.5■□□□□ 0.23
AFF3-202ENST00000409236 PPFIBP1Q86W92 1011 aa16.5■□□□□ 0.23
AFF3-202ENST00000409236 BAZ1AQ9NRL2 1556 aaPredicted RBP16.5■□□□□ 0.23
AFF3-202ENST00000409236 DHX16O60231 1041 aaKnown RBP16.5■□□□□ 0.23
AFF3-202ENST00000409236 CCDC192P0DO97 292 aa16.5■□□□□ 0.23
AFF3-202ENST00000409236 ERC2O15083 957 aa16.49■□□□□ 0.23
AFF3-202ENST00000409236 KIF27Q86VH2 1401 aa16.49■□□□□ 0.23
AFF3-202ENST00000409236 ZKSCAN2Q63HK3 967 aa16.49■□□□□ 0.23
AFF3-202ENST00000409236 CCDC102AQ96A19 550 aa16.49■□□□□ 0.23
AFF3-202ENST00000409236 CSB-PGBD3P0DP91 1061 aa16.48■□□□□ 0.23
AFF3-202ENST00000409236 JMYQ8N9B5 988 aa16.48■□□□□ 0.23
AFF3-202ENST00000409236 ZNF396Q96N95 335 aaPredicted RBP16.48■□□□□ 0.23
AFF3-202ENST00000409236 GTF2E1P29083 439 aaPredicted RBP16.48■□□□□ 0.23
AFF3-202ENST00000409236 MCM2P49736 904 aa16.48■□□□□ 0.23
AFF3-202ENST00000409236 E9PSI1 815 aa16.48■□□□□ 0.23
AFF3-202ENST00000409236 PRKCSHP14314 528 aaPredicted RBP16.48■□□□□ 0.23
AFF3-202ENST00000409236 TICAM2Q86XR7 235 aa16.48■□□□□ 0.23
AFF3-202ENST00000409236 KCNH8Q96L42 1107 aa16.47■□□□□ 0.23
AFF3-202ENST00000409236 CRACR2AQ9BSW2 395 aa16.47■□□□□ 0.23
AFF3-202ENST00000409236 CDK5RAP3Q96JB5 506 aa16.47■□□□□ 0.23
AFF3-202ENST00000409236 DDX23Q9BUQ8 820 aaKnown RBP16.47■□□□□ 0.23
AFF3-202ENST00000409236 CFAP45Q9UL16 551 aa16.47■□□□□ 0.23
AFF3-202ENST00000409236 SETSIPP0DME0 302 aa16.47■□□□□ 0.23
AFF3-202ENST00000409236 RALYLQ86SE5 291 aaKnown RBP16.47■□□□□ 0.23
AFF3-202ENST00000409236 IFIT2P09913 472 aaKnown RBP16.46■□□□□ 0.23
AFF3-202ENST00000409236 JAKMIP3Q5VZ66 844 aa16.46■□□□□ 0.23
AFF3-202ENST00000409236 VPS37DQ86XT2 251 aa16.46■□□□□ 0.23
AFF3-202ENST00000409236 FYB1O15117 783 aa16.46■□□□□ 0.23
AFF3-202ENST00000409236 HSP90AB4PQ58FF6 505 aa16.46■□□□□ 0.23
AFF3-202ENST00000409236 RRP1P56182 461 aaKnown RBP16.46■□□□□ 0.23
AFF3-202ENST00000409236 WDR66Q8TBY9 1149 aa16.46■□□□□ 0.22
AFF3-202ENST00000409236 HSPA5P11021 654 aaKnown RBP16.45■□□□□ 0.22
AFF3-202ENST00000409236 RBM10P98175 930 aaKnown RBP16.45■□□□□ 0.22
AFF3-202ENST00000409236 NFKBIBQ15653 356 aa16.45■□□□□ 0.22
AFF3-202ENST00000409236 FAM114A1Q8IWE2 563 aa16.45■□□□□ 0.22
AFF3-202ENST00000409236 TNIKQ9UKE5 1360 aa16.45■□□□□ 0.22
AFF3-202ENST00000409236 CLUAP1Q96AJ1 413 aa16.44■□□□□ 0.22
AFF3-202ENST00000409236 FAM193AP78312 1265 aa16.44■□□□□ 0.22
AFF3-202ENST00000409236 CCDC148Q8NFR7 591 aa16.44■□□□□ 0.22
AFF3-202ENST00000409236 GIGYF2Q6Y7W6 1299 aaKnown RBP16.44■□□□□ 0.22
AFF3-202ENST00000409236 GPATCH11Q8N954 259 aa16.44■□□□□ 0.22
AFF3-202ENST00000409236 SART3Q15020 963 aaKnown RBP16.44■□□□□ 0.22
AFF3-202ENST00000409236 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.44■□□□□ 0.22
AFF3-202ENST00000409236 V9GYY5 206 aaPredicted RBP16.44■□□□□ 0.22
AFF3-202ENST00000409236 TRIM21P19474 475 aaKnown RBP16.44■□□□□ 0.22
AFF3-202ENST00000409236 DAAM2Q86T65 1068 aa16.44■□□□□ 0.22
AFF3-202ENST00000409236 MYBBP1AQ9BQG0 1328 aaKnown RBP16.43■□□□□ 0.22
AFF3-202ENST00000409236 GCOM1H8Y6P7 765 aaPredicted RBP16.43■□□□□ 0.22
AFF3-202ENST00000409236 RAD21O60216 631 aa16.43■□□□□ 0.22
AFF3-202ENST00000409236 MYZAPP0CAP1 466 aa16.43■□□□□ 0.22
AFF3-202ENST00000409236 NGEFQ8N5V2 710 aa16.43■□□□□ 0.22
AFF3-202ENST00000409236 PAK3O75914 559 aaPredicted RBP16.43■□□□□ 0.22
AFF3-202ENST00000409236 SMC1AQ14683 1233 aaKnown RBP16.43■□□□□ 0.22
AFF3-202ENST00000409236 KIAA1328Q86T90 577 aa16.43■□□□□ 0.22
AFF3-202ENST00000409236 C22orf23Q9BZE7 217 aa16.43■□□□□ 0.22
AFF3-202ENST00000409236 C9orf78Q9NZ63 289 aaPredicted RBP16.43■□□□□ 0.22
AFF3-202ENST00000409236 AEBP1Q8IUX7 1158 aa16.42■□□□□ 0.22
AFF3-202ENST00000409236 SIN3AQ96ST3 1273 aa16.42■□□□□ 0.22
AFF3-202ENST00000409236 SERPINC1P01008 464 aa16.42■□□□□ 0.22
AFF3-202ENST00000409236 TRAK2O60296 914 aa16.42■□□□□ 0.22
AFF3-202ENST00000409236 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.42■□□□□ 0.22
AFF3-202ENST00000409236 BCL11BQ9C0K0 894 aaPredicted RBP16.41■□□□□ 0.22
AFF3-202ENST00000409236 LRRFIP2Q9Y608 721 aaKnown RBP16.41■□□□□ 0.22
AFF3-202ENST00000409236 C6orf163Q5TEZ5 329 aa16.41■□□□□ 0.22
AFF3-202ENST00000409236 DNAJC2Q99543 621 aaKnown RBP16.41■□□□□ 0.22
AFF3-202ENST00000409236 CWC22Q9HCG8 908 aaKnown RBP16.41■□□□□ 0.22
AFF3-202ENST00000409236 CGNQ9P2M7 1197 aaKnown RBP16.41■□□□□ 0.22
AFF3-202ENST00000409236 SLC4A3P48751 1232 aa16.4■□□□□ 0.22
AFF3-202ENST00000409236 CLGNO14967 610 aa16.4■□□□□ 0.22
AFF3-202ENST00000409236 SPECC1LQ69YQ0 1117 aa16.4■□□□□ 0.22
AFF3-202ENST00000409236 SSR1P43307 286 aaKnown RBP16.39■□□□□ 0.21
AFF3-202ENST00000409236 MAPK8IP2Q13387 824 aaPredicted RBP16.39■□□□□ 0.21
AFF3-202ENST00000409236 SWAP70Q9UH65 585 aa16.39■□□□□ 0.21
AFF3-202ENST00000409236 GRIPAP1Q4V328 841 aa16.39■□□□□ 0.21
AFF3-202ENST00000409236 DZIP1LQ8IYY4 767 aaKnown RBP16.39■□□□□ 0.21
AFF3-202ENST00000409236 IMMTQ16891 758 aaKnown RBP16.39■□□□□ 0.21
AFF3-202ENST00000409236 POTEB2H3BUK9 544 aa16.38■□□□□ 0.21
AFF3-202ENST00000409236 PDIA4P13667 645 aaKnown RBP16.38■□□□□ 0.21
AFF3-202ENST00000409236 UACAQ9BZF9 1416 aa16.38■□□□□ 0.21
AFF3-202ENST00000409236 UBXN4Q92575 508 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms