RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.85■□□□□ 0.77
CHRNA1-203ENST00000409219 CCDC125Q86Z20 511 aa19.85■□□□□ 0.77
CHRNA1-203ENST00000409219 KIF1BO60333 1816 aa19.83■□□□□ 0.77
CHRNA1-203ENST00000409219 PXDNQ92626 1479 aa19.82■□□□□ 0.76
CHRNA1-203ENST00000409219 GLI3P10071 1580 aa19.81■□□□□ 0.76
CHRNA1-203ENST00000409219 CDC42BPGQ6DT37 1551 aa19.8■□□□□ 0.76
CHRNA1-203ENST00000409219 BLMP54132 1417 aaPredicted RBP19.8■□□□□ 0.76
CHRNA1-203ENST00000409219 LRP5O75197 1615 aa19.8■□□□□ 0.76
CHRNA1-203ENST00000409219 GJD4Q96KN9 370 aaPredicted RBP19.79■□□□□ 0.76
CHRNA1-203ENST00000409219 BRWD3Q6RI45 1802 aa19.79■□□□□ 0.76
CHRNA1-203ENST00000409219 HFM1A2PYH4 1435 aa19.78■□□□□ 0.76
CHRNA1-203ENST00000409219 NPHP3Q7Z494 1330 aa19.78■□□□□ 0.76
CHRNA1-203ENST00000409219 RALGAPBQ86X10 1494 aa19.76■□□□□ 0.75
CHRNA1-203ENST00000409219 SLIT2O94813 1529 aa19.75■□□□□ 0.75
CHRNA1-203ENST00000409219 XPCQ01831 940 aaPredicted RBP19.73■□□□□ 0.75
CHRNA1-203ENST00000409219 DEFB132Q7Z7B7 95 aa19.73■□□□□ 0.75
CHRNA1-203ENST00000409219 ITGAEP38570 1179 aa19.73■□□□□ 0.75
CHRNA1-203ENST00000409219 ESCO1Q5FWF5 840 aa19.73■□□□□ 0.75
CHRNA1-203ENST00000409219 USP32Q8NFA0 1604 aa19.72■□□□□ 0.75
CHRNA1-203ENST00000409219 PPLO60437 1756 aa19.72■□□□□ 0.75
CHRNA1-203ENST00000409219 VGFO15240 615 aaPredicted RBP19.7■□□□□ 0.74
CHRNA1-203ENST00000409219 FOXO3O43524 673 aa19.7■□□□□ 0.74
CHRNA1-203ENST00000409219 UNC5CLQ8IV45 518 aa19.7■□□□□ 0.74
CHRNA1-203ENST00000409219 NAIPQ13075 1403 aa19.68■□□□□ 0.74
CHRNA1-203ENST00000409219 PLCH1Q4KWH8 1693 aa19.67■□□□□ 0.74
CHRNA1-203ENST00000409219 LRPPRCP42704 1394 aaKnown RBP19.66■□□□□ 0.74
CHRNA1-203ENST00000409219 FMN2Q9NZ56 1722 aa19.66■□□□□ 0.74
CHRNA1-203ENST00000409219 KIF1AQ12756 1690 aa19.65■□□□□ 0.74
CHRNA1-203ENST00000409219 SF3B2Q13435 895 aaKnown RBP19.65■□□□□ 0.74
CHRNA1-203ENST00000409219 NWD2Q9ULI1 1742 aa19.64■□□□□ 0.73
CHRNA1-203ENST00000409219 SPATA31A3Q5VYP0 1347 aa19.64■□□□□ 0.73
CHRNA1-203ENST00000409219 ABCA3Q99758 1704 aa19.63■□□□□ 0.73
CHRNA1-203ENST00000409219 NUTM2FA1L443 756 aa19.63■□□□□ 0.73
CHRNA1-203ENST00000409219 SEPT12Q8IYM1 358 aa19.63■□□□□ 0.73
CHRNA1-203ENST00000409219 RPGRIP1LQ68CZ1 1315 aa19.63■□□□□ 0.73
CHRNA1-203ENST00000409219 TECPR2O15040 1411 aa19.63■□□□□ 0.73
CHRNA1-203ENST00000409219 CCDC144AA2RUR9 1427 aa19.62■□□□□ 0.73
CHRNA1-203ENST00000409219 KNDC1Q76NI1 1749 aa19.62■□□□□ 0.73
CHRNA1-203ENST00000409219 PSDA5PKW4 1024 aaPredicted RBP19.6■□□□□ 0.73
CHRNA1-203ENST00000409219 VPS72Q15906 364 aa19.6■□□□□ 0.73
CHRNA1-203ENST00000409219 TNS3Q68CZ2 1445 aa19.58■□□□□ 0.73
CHRNA1-203ENST00000409219 PLEKHH1Q9ULM0 1364 aa19.58■□□□□ 0.73
CHRNA1-203ENST00000409219 KRT27Q7Z3Y8 459 aa19.58■□□□□ 0.72
CHRNA1-203ENST00000409219 WAPLQ7Z5K2 1190 aa19.58■□□□□ 0.72
CHRNA1-203ENST00000409219 ONECUT3O60422 494 aaPredicted RBP19.57■□□□□ 0.72
CHRNA1-203ENST00000409219 HRCP23327 699 aa19.57■□□□□ 0.72
CHRNA1-203ENST00000409219 IFT172Q9UG01 1749 aa19.57■□□□□ 0.72
CHRNA1-203ENST00000409219 RGPD8O14715 1765 aaPredicted RBP19.56■□□□□ 0.72
CHRNA1-203ENST00000409219 NRAPQ86VF7 1730 aa19.56■□□□□ 0.72
CHRNA1-203ENST00000409219 RRBP1Q9P2E9 1410 aaKnown RBP19.56■□□□□ 0.72
CHRNA1-203ENST00000409219 KRT28Q7Z3Y7 464 aa19.55■□□□□ 0.72
CHRNA1-203ENST00000409219 RGPD1P0DJD0 1748 aa19.54■□□□□ 0.72
CHRNA1-203ENST00000409219 BAG6P46379 1132 aa19.54■□□□□ 0.72
CHRNA1-203ENST00000409219 CABLES1Q8TDN4 633 aa19.54■□□□□ 0.72
CHRNA1-203ENST00000409219 STK26Q9P289 416 aa19.54■□□□□ 0.72
CHRNA1-203ENST00000409219 ADGRF5Q8IZF2 1346 aa19.54■□□□□ 0.72
CHRNA1-203ENST00000409219 HAP1P54257 671 aaPredicted RBP19.54■□□□□ 0.72
CHRNA1-203ENST00000409219 CCDC9Q9Y3X0 531 aaKnown RBP19.54■□□□□ 0.72
CHRNA1-203ENST00000409219 ABCC11Q96J66 1382 aa19.53■□□□□ 0.72
CHRNA1-203ENST00000409219 TNS1Q9HBL0 1735 aaKnown RBP19.51■□□□□ 0.71
CHRNA1-203ENST00000409219 NRXN1Q9ULB1 1477 aa19.49■□□□□ 0.71
CHRNA1-203ENST00000409219 PLEKHG5O94827 1062 aa19.49■□□□□ 0.71
CHRNA1-203ENST00000409219 SBNO1A3KN83 1393 aa19.49■□□□□ 0.71
CHRNA1-203ENST00000409219 A0A0G2JS52 829 aa19.48■□□□□ 0.71
CHRNA1-203ENST00000409219 MYT1Q01538 1121 aa19.48■□□□□ 0.71
CHRNA1-203ENST00000409219 PIK3C2GO75747 1445 aa19.48■□□□□ 0.71
CHRNA1-203ENST00000409219 EN1Q05925 392 aaPredicted RBP19.48■□□□□ 0.71
CHRNA1-203ENST00000409219 TMEM132EQ6IEE7 984 aa19.48■□□□□ 0.71
CHRNA1-203ENST00000409219 PHF8Q9UPP1 1060 aa19.48■□□□□ 0.71
CHRNA1-203ENST00000409219 YTHDC2Q9H6S0 1430 aaKnown RBP19.47■□□□□ 0.71
CHRNA1-203ENST00000409219 ARHGEF10O15013 1369 aa19.47■□□□□ 0.71
CHRNA1-203ENST00000409219 DISP2A7MBM2 1401 aa19.47■□□□□ 0.71
CHRNA1-203ENST00000409219 SPATA31E1Q6ZUB1 1445 aa19.47■□□□□ 0.71
CHRNA1-203ENST00000409219 FAM98CQ17RN3 349 aaKnown RBP19.47■□□□□ 0.71
CHRNA1-203ENST00000409219 PPARGC1BQ86YN6 1023 aaKnown RBP19.47■□□□□ 0.71
CHRNA1-203ENST00000409219 SLC4A1APQ9BWU0 796 aaKnown RBP19.47■□□□□ 0.71
CHRNA1-203ENST00000409219 PSME1Q06323 249 aa19.46■□□□□ 0.71
CHRNA1-203ENST00000409219 R3HDM1Q15032 1099 aaKnown RBP19.46■□□□□ 0.71
CHRNA1-203ENST00000409219 THSD7AQ9UPZ6 1657 aa19.46■□□□□ 0.71
CHRNA1-203ENST00000409219 FAM83GA6ND36 823 aa19.45■□□□□ 0.7
CHRNA1-203ENST00000409219 TRPM3Q9HCF6 1732 aaPredicted RBP19.45■□□□□ 0.7
CHRNA1-203ENST00000409219 COL14A1Q05707 1796 aaKnown RBP19.45■□□□□ 0.7
CHRNA1-203ENST00000409219 ANKRD30BQ9BXX2 1392 aa19.45■□□□□ 0.7
CHRNA1-203ENST00000409219 LMOD2Q6P5Q4 547 aa19.44■□□□□ 0.7
CHRNA1-203ENST00000409219 FAM182BQ5T319 152 aa19.43■□□□□ 0.7
CHRNA1-203ENST00000409219 ALS2Q96Q42 1657 aa19.42■□□□□ 0.7
CHRNA1-203ENST00000409219 ADGRB2O60241 1585 aa19.42■□□□□ 0.7
CHRNA1-203ENST00000409219 CRYBG1Q9Y4K1 1723 aa19.42■□□□□ 0.7
CHRNA1-203ENST00000409219 RGL3Q3MIN7 710 aa19.41■□□□□ 0.7
CHRNA1-203ENST00000409219 BTG4Q9NY30 223 aa19.41■□□□□ 0.7
CHRNA1-203ENST00000409219 EZH2Q15910 746 aaKnown RBP19.38■□□□□ 0.69
CHRNA1-203ENST00000409219 SIRT1Q96EB6 747 aa19.38■□□□□ 0.69
CHRNA1-203ENST00000409219 ANKARQ7Z5J8 1434 aa19.37■□□□□ 0.69
CHRNA1-203ENST00000409219 SPATA31A5Q5VU36 1347 aa19.37■□□□□ 0.69
CHRNA1-203ENST00000409219 SPATA31A7Q8IWB4 1347 aa19.37■□□□□ 0.69
CHRNA1-203ENST00000409219 RREB1Q92766 1687 aa19.36■□□□□ 0.69
CHRNA1-203ENST00000409219 PMFBP1Q8TBY8 1022 aa19.36■□□□□ 0.69
CHRNA1-203ENST00000409219 NUP188Q5SRE5 1749 aa19.34■□□□□ 0.69
CHRNA1-203ENST00000409219 SAFB2Q14151 953 aaKnown RBP eCLIP19.34■□□□□ 0.69
CHRNA1-203ENST00000409219 CAMKK2Q96RR4 588 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms