RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 LRP6O75581 1613 aa14.22□□□□□ -0.13
NIF3L1-202ENST00000409020 PLEKHH1Q9ULM0 1364 aa14.22□□□□□ -0.13
NIF3L1-202ENST00000409020 WAPLQ7Z5K2 1190 aa14.21□□□□□ -0.13
NIF3L1-202ENST00000409020 C1orf167Q5SNV9 1468 aa14.21□□□□□ -0.14
NIF3L1-202ENST00000409020 NRXN1Q9ULB1 1477 aa14.21□□□□□ -0.14
NIF3L1-202ENST00000409020 ORAI2Q96SN7 254 aa14.2□□□□□ -0.14
NIF3L1-202ENST00000409020 NHSL1Q5SYE7 1610 aa14.19□□□□□ -0.14
NIF3L1-202ENST00000409020 CFAP70Q5T0N1 1121 aa14.19□□□□□ -0.14
NIF3L1-202ENST00000409020 POTEAQ6S8J7 498 aa14.19□□□□□ -0.14
NIF3L1-202ENST00000409020 ACIN1Q9UKV3 1341 aaKnown RBP14.19□□□□□ -0.14
NIF3L1-202ENST00000409020 LRPPRCP42704 1394 aaKnown RBP14.19□□□□□ -0.14
NIF3L1-202ENST00000409020 TECPR2O15040 1411 aa14.19□□□□□ -0.14
NIF3L1-202ENST00000409020 MYOM2P54296 1465 aa14.18□□□□□ -0.14
NIF3L1-202ENST00000409020 YTHDC2Q9H6S0 1430 aaKnown RBP14.17□□□□□ -0.14
NIF3L1-202ENST00000409020 SHPRHQ149N8 1683 aa14.16□□□□□ -0.14
NIF3L1-202ENST00000409020 ABCC11Q96J66 1382 aa14.16□□□□□ -0.14
NIF3L1-202ENST00000409020 C14orf93Q9H972 538 aaKnown RBP14.16□□□□□ -0.14
NIF3L1-202ENST00000409020 NUTM2FA1L443 756 aa14.15□□□□□ -0.14
NIF3L1-202ENST00000409020 KNDC1Q76NI1 1749 aa14.15□□□□□ -0.14
NIF3L1-202ENST00000409020 CDC42BPGQ6DT37 1551 aa14.15□□□□□ -0.14
NIF3L1-202ENST00000409020 DAXXQ9UER7 740 aaPredicted RBP14.14□□□□□ -0.15
NIF3L1-202ENST00000409020 DHX57Q6P158 1386 aaKnown RBP14.14□□□□□ -0.15
NIF3L1-202ENST00000409020 SPATA31A6Q5VVP1 1343 aa14.14□□□□□ -0.15
NIF3L1-202ENST00000409020 NUTM2BA6NNL0 878 aaPredicted RBP14.14□□□□□ -0.15
NIF3L1-202ENST00000409020 NUTM2EB1AL46 878 aaPredicted RBP14.14□□□□□ -0.15
NIF3L1-202ENST00000409020 NUTM2AQ8IVF1 878 aaPredicted RBP14.14□□□□□ -0.15
NIF3L1-202ENST00000409020 KDM2AQ9Y2K7 1162 aa14.14□□□□□ -0.15
NIF3L1-202ENST00000409020 DCAF11Q8TEB1 546 aa14.13□□□□□ -0.15
NIF3L1-202ENST00000409020 ADGRB1O14514 1584 aa14.12□□□□□ -0.15
NIF3L1-202ENST00000409020 PNPLA6Q8IY17 1366 aa14.12□□□□□ -0.15
NIF3L1-202ENST00000409020 LAMC1P11047 1609 aa14.11□□□□□ -0.15
NIF3L1-202ENST00000409020 SAFB2Q14151 953 aaKnown RBP eCLIP14.11□□□□□ -0.15
NIF3L1-202ENST00000409020 ESCO1Q5FWF5 840 aa14.1□□□□□ -0.15
NIF3L1-202ENST00000409020 MEX3CQ5U5Q3 659 aaKnown RBP14.1□□□□□ -0.15
NIF3L1-202ENST00000409020 LRRC59Q96AG4 307 aaKnown RBP14.1□□□□□ -0.15
NIF3L1-202ENST00000409020 SOS2Q07890 1332 aaPredicted RBP14.1□□□□□ -0.15
NIF3L1-202ENST00000409020 XPCQ01831 940 aaPredicted RBP14.1□□□□□ -0.15
NIF3L1-202ENST00000409020 PRAM1Q96QH2 718 aa14.1□□□□□ -0.15
NIF3L1-202ENST00000409020 RNF216Q9NWF9 866 aaPredicted RBP14.09□□□□□ -0.15
NIF3L1-202ENST00000409020 EP400Q96L91 3159 aa14.08□□□□□ -0.16
NIF3L1-202ENST00000409020 FMN2Q9NZ56 1722 aa14.08□□□□□ -0.16
NIF3L1-202ENST00000409020 FOXO3O43524 673 aa14.07□□□□□ -0.16
NIF3L1-202ENST00000409020 TRAK1Q9UPV9 953 aa14.07□□□□□ -0.16
NIF3L1-202ENST00000409020 PXDNQ92626 1479 aa14.07□□□□□ -0.16
NIF3L1-202ENST00000409020 SRCAPQ6ZRS2 3230 aa14.07□□□□□ -0.16
NIF3L1-202ENST00000409020 SIRT1Q96EB6 747 aa14.06□□□□□ -0.16
NIF3L1-202ENST00000409020 DLC1Q96QB1 1528 aa14.05□□□□□ -0.16
NIF3L1-202ENST00000409020 ADAMTS2O95450 1211 aa14.05□□□□□ -0.16
NIF3L1-202ENST00000409020 C8orf37Q96NL8 207 aa14.05□□□□□ -0.16
NIF3L1-202ENST00000409020 HIRIP3Q9BW71 556 aaPredicted RBP14.05□□□□□ -0.16
NIF3L1-202ENST00000409020 AFF2P51816 1311 aa14.04□□□□□ -0.16
NIF3L1-202ENST00000409020 POGKQ9P215 609 aa14.04□□□□□ -0.16
NIF3L1-202ENST00000409020 NPHP3Q7Z494 1330 aa14.03□□□□□ -0.16
NIF3L1-202ENST00000409020 USP32Q8NFA0 1604 aa14.03□□□□□ -0.16
NIF3L1-202ENST00000409020 RGPD8O14715 1765 aaPredicted RBP14.02□□□□□ -0.16
NIF3L1-202ENST00000409020 MINK1Q8N4C8 1332 aaPredicted RBP14.02□□□□□ -0.17
NIF3L1-202ENST00000409020 ZNF772Q68DY9 489 aaPredicted RBP14.01□□□□□ -0.17
NIF3L1-202ENST00000409020 COL22A1Q8NFW1 1626 aaPredicted RBP14.01□□□□□ -0.17
NIF3L1-202ENST00000409020 SIN3AQ96ST3 1273 aa14.01□□□□□ -0.17
NIF3L1-202ENST00000409020 ADGRB2O60241 1585 aa14□□□□□ -0.17
NIF3L1-202ENST00000409020 NBPF1Q3BBV0 1214 aa14□□□□□ -0.17
NIF3L1-202ENST00000409020 PMFBP1Q8TBY8 1022 aa13.99□□□□□ -0.17
NIF3L1-202ENST00000409020 PHF8Q9UPP1 1060 aa13.99□□□□□ -0.17
NIF3L1-202ENST00000409020 PRR36Q9H6K5 1346 aa13.99□□□□□ -0.17
NIF3L1-202ENST00000409020 KIF1AQ12756 1690 aa13.99□□□□□ -0.17
NIF3L1-202ENST00000409020 ARHGEF28Q8N1W1 1705 aaKnown RBP13.99□□□□□ -0.17
NIF3L1-202ENST00000409020 SPATA31A3Q5VYP0 1347 aa13.98□□□□□ -0.17
NIF3L1-202ENST00000409020 KRT28Q7Z3Y7 464 aa13.98□□□□□ -0.17
NIF3L1-202ENST00000409020 NGLY1Q96IV0 654 aa13.98□□□□□ -0.17
NIF3L1-202ENST00000409020 PLEKHG5O94827 1062 aa13.97□□□□□ -0.17
NIF3L1-202ENST00000409020 STAC3Q96MF2 364 aa13.97□□□□□ -0.17
NIF3L1-202ENST00000409020 RXRBP28702 533 aa13.96□□□□□ -0.17
NIF3L1-202ENST00000409020 L3MBTL2Q969R5 705 aa13.96□□□□□ -0.17
NIF3L1-202ENST00000409020 QTRT2Q9H974 415 aaKnown RBP13.96□□□□□ -0.17
NIF3L1-202ENST00000409020 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.17
NIF3L1-202ENST00000409020 ANKARQ7Z5J8 1434 aa13.96□□□□□ -0.18
NIF3L1-202ENST00000409020 WASLO00401 505 aaPredicted RBP13.95□□□□□ -0.18
NIF3L1-202ENST00000409020 TULP4Q9NRJ4 1543 aa13.95□□□□□ -0.18
NIF3L1-202ENST00000409020 NEUROD1Q13562 356 aa13.95□□□□□ -0.18
NIF3L1-202ENST00000409020 CABLES1Q8TDN4 633 aa13.95□□□□□ -0.18
NIF3L1-202ENST00000409020 RGS12O14924 1447 aa13.94□□□□□ -0.18
NIF3L1-202ENST00000409020 TNS3Q68CZ2 1445 aa13.94□□□□□ -0.18
NIF3L1-202ENST00000409020 CENPBP07199 599 aaPredicted RBP13.94□□□□□ -0.18
NIF3L1-202ENST00000409020 FNBP4Q8N3X1 1017 aaPredicted RBP13.94□□□□□ -0.18
NIF3L1-202ENST00000409020 USP21Q9UK80 565 aa13.94□□□□□ -0.18
NIF3L1-202ENST00000409020 KIAA1210Q9ULL0 1709 aa13.93□□□□□ -0.18
NIF3L1-202ENST00000409020 ATP7BP35670 1465 aa13.92□□□□□ -0.18
NIF3L1-202ENST00000409020 BCL9LQ86UU0 1499 aa13.92□□□□□ -0.18
NIF3L1-202ENST00000409020 PSME1Q06323 249 aa13.92□□□□□ -0.18
NIF3L1-202ENST00000409020 HOXD11P31277 338 aaPredicted RBP13.91□□□□□ -0.18
NIF3L1-202ENST00000409020 LMOD2Q6P5Q4 547 aa13.91□□□□□ -0.18
NIF3L1-202ENST00000409020 TRPM3Q9HCF6 1732 aaPredicted RBP13.91□□□□□ -0.18
NIF3L1-202ENST00000409020 RBM6P78332 1123 aaKnown RBP13.91□□□□□ -0.18
NIF3L1-202ENST00000409020 SBNO1A3KN83 1393 aa13.9□□□□□ -0.18
NIF3L1-202ENST00000409020 ATRNO75882 1429 aa13.9□□□□□ -0.18
NIF3L1-202ENST00000409020 NUDT16Q96DE0 195 aaKnown RBP13.9□□□□□ -0.18
NIF3L1-202ENST00000409020 CDK19Q9BWU1 502 aa13.9□□□□□ -0.18
NIF3L1-202ENST00000409020 MARF1Q9Y4F3 1742 aaKnown RBP13.9□□□□□ -0.18
NIF3L1-202ENST00000409020 CDK12Q9NYV4 1490 aaPredicted RBP13.9□□□□□ -0.18
NIF3L1-202ENST00000409020 ABCA3Q99758 1704 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms