RNA–Protein interactions for RNA: ENST00000407704.1

ITSN2-204, Transcript of intersectin 2, humanhuman

TSL 4

Gene ITSN2, Length 597 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-204ENST00000407704 CDC42BPGQ6DT37 1551 aa29.77■■■□□ 2.36
ITSN2-204ENST00000407704 AFF2P51816 1311 aa29.77■■■□□ 2.36
ITSN2-204ENST00000407704 LRPPRCP42704 1394 aaKnown RBP29.76■■■□□ 2.35
ITSN2-204ENST00000407704 SOS2Q07890 1332 aaPredicted RBP29.75■■■□□ 2.35
ITSN2-204ENST00000407704 C8orf37Q96NL8 207 aa29.75■■■□□ 2.35
ITSN2-204ENST00000407704 PLEKHH1Q9ULM0 1364 aa29.75■■■□□ 2.35
ITSN2-204ENST00000407704 TECPR2O15040 1411 aa29.74■■■□□ 2.35
ITSN2-204ENST00000407704 ACIN1Q9UKV3 1341 aaKnown RBP29.73■■■□□ 2.35
ITSN2-204ENST00000407704 NUTM2FA1L443 756 aa29.72■■■□□ 2.35
ITSN2-204ENST00000407704 ESCO1Q5FWF5 840 aa29.72■■■□□ 2.35
ITSN2-204ENST00000407704 RXRBP28702 533 aa29.71■■■□□ 2.35
ITSN2-204ENST00000407704 ABCC11Q96J66 1382 aa29.71■■■□□ 2.35
ITSN2-204ENST00000407704 ADAMTS2O95450 1211 aa29.7■■■□□ 2.35
ITSN2-204ENST00000407704 YTHDC2Q9H6S0 1430 aaKnown RBP29.7■■■□□ 2.34
ITSN2-204ENST00000407704 C14orf93Q9H972 538 aaKnown RBP29.67■■■□□ 2.34
ITSN2-204ENST00000407704 FMN2Q9NZ56 1722 aa29.67■■■□□ 2.34
ITSN2-204ENST00000407704 RGPD8O14715 1765 aaPredicted RBP29.67■■■□□ 2.34
ITSN2-204ENST00000407704 XPCQ01831 940 aaPredicted RBP29.66■■■□□ 2.34
ITSN2-204ENST00000407704 CFAP70Q5T0N1 1121 aa29.66■■■□□ 2.34
ITSN2-204ENST00000407704 NRXN1Q9ULB1 1477 aa29.66■■■□□ 2.34
ITSN2-204ENST00000407704 COL22A1Q8NFW1 1626 aaPredicted RBP29.65■■■□□ 2.34
ITSN2-204ENST00000407704 MYOM2P54296 1465 aa29.65■■■□□ 2.34
ITSN2-204ENST00000407704 FOXO3O43524 673 aa29.64■■■□□ 2.34
ITSN2-204ENST00000407704 NGLY1Q96IV0 654 aa29.64■■■□□ 2.34
ITSN2-204ENST00000407704 PXDNQ92626 1479 aa29.63■■■□□ 2.33
ITSN2-204ENST00000407704 QTRT2Q9H974 415 aaKnown RBP29.63■■■□□ 2.33
ITSN2-204ENST00000407704 NPHP3Q7Z494 1330 aa29.63■■■□□ 2.33
ITSN2-204ENST00000407704 DHX57Q6P158 1386 aaKnown RBP29.59■■■□□ 2.33
ITSN2-204ENST00000407704 CDK12Q9NYV4 1490 aaPredicted RBP29.59■■■□□ 2.33
ITSN2-204ENST00000407704 UPF1Q92900 1129 aaKnown RBP eCLIP29.58■■■□□ 2.33
ITSN2-204ENST00000407704 MARF1Q9Y4F3 1742 aaKnown RBP29.58■■■□□ 2.33
ITSN2-204ENST00000407704 SIRT1Q96EB6 747 aa29.57■■■□□ 2.32
ITSN2-204ENST00000407704 SAFB2Q14151 953 aaKnown RBP eCLIP29.56■■■□□ 2.32
ITSN2-204ENST00000407704 KIF1AQ12756 1690 aa29.56■■■□□ 2.32
ITSN2-204ENST00000407704 RBM6P78332 1123 aaKnown RBP29.55■■■□□ 2.32
ITSN2-204ENST00000407704 RGS12O14924 1447 aa29.54■■■□□ 2.32
ITSN2-204ENST00000407704 USP21Q9UK80 565 aa29.54■■■□□ 2.32
ITSN2-204ENST00000407704 PRAM1Q96QH2 718 aa29.53■■■□□ 2.32
ITSN2-204ENST00000407704 KDM2AQ9Y2K7 1162 aa29.53■■■□□ 2.32
ITSN2-204ENST00000407704 ADGRB1O14514 1584 aa29.48■■■□□ 2.31
ITSN2-204ENST00000407704 FNBP4Q8N3X1 1017 aaPredicted RBP29.48■■■□□ 2.31
ITSN2-204ENST00000407704 DCAF11Q8TEB1 546 aa29.48■■■□□ 2.31
ITSN2-204ENST00000407704 DLC1Q96QB1 1528 aa29.47■■■□□ 2.31
ITSN2-204ENST00000407704 POGKQ9P215 609 aa29.47■■■□□ 2.31
ITSN2-204ENST00000407704 KRT28Q7Z3Y7 464 aa29.46■■■□□ 2.31
ITSN2-204ENST00000407704 TRPC5Q9UL62 973 aaPredicted RBP29.45■■■□□ 2.31
ITSN2-204ENST00000407704 PHF8Q9UPP1 1060 aa29.45■■■□□ 2.31
ITSN2-204ENST00000407704 TRAK1Q9UPV9 953 aa29.45■■■□□ 2.31
ITSN2-204ENST00000407704 USP32Q8NFA0 1604 aa29.45■■■□□ 2.3
ITSN2-204ENST00000407704 SPATA31A3Q5VYP0 1347 aa29.45■■■□□ 2.3
ITSN2-204ENST00000407704 HRCP23327 699 aa29.43■■■□□ 2.3
ITSN2-204ENST00000407704 ATRNO75882 1429 aa29.43■■■□□ 2.3
ITSN2-204ENST00000407704 BCL9LQ86UU0 1499 aa29.42■■■□□ 2.3
ITSN2-204ENST00000407704 HIRIP3Q9BW71 556 aaPredicted RBP29.4■■■□□ 2.3
ITSN2-204ENST00000407704 ADGRB2O60241 1585 aa29.39■■■□□ 2.3
ITSN2-204ENST00000407704 PLEKHG5O94827 1062 aa29.39■■■□□ 2.3
ITSN2-204ENST00000407704 PMFBP1Q8TBY8 1022 aa29.37■■■□□ 2.29
ITSN2-204ENST00000407704 MINK1Q8N4C8 1332 aaPredicted RBP29.37■■■□□ 2.29
ITSN2-204ENST00000407704 TNS3Q68CZ2 1445 aa29.37■■■□□ 2.29
ITSN2-204ENST00000407704 PSME1Q06323 249 aa29.36■■■□□ 2.29
ITSN2-204ENST00000407704 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.35■■■□□ 2.29
ITSN2-204ENST00000407704 CABLES1Q8TDN4 633 aa29.35■■■□□ 2.29
ITSN2-204ENST00000407704 ABCA3Q99758 1704 aa29.34■■■□□ 2.29
ITSN2-204ENST00000407704 ARHGEF28Q8N1W1 1705 aaKnown RBP29.34■■■□□ 2.29
ITSN2-204ENST00000407704 LMOD2Q6P5Q4 547 aa29.33■■■□□ 2.29
ITSN2-204ENST00000407704 ANKARQ7Z5J8 1434 aa29.33■■■□□ 2.29
ITSN2-204ENST00000407704 SBNO1A3KN83 1393 aa29.31■■■□□ 2.28
ITSN2-204ENST00000407704 PRR36Q9H6K5 1346 aa29.3■■■□□ 2.28
ITSN2-204ENST00000407704 HAP1P54257 671 aaPredicted RBP29.3■■■□□ 2.28
ITSN2-204ENST00000407704 STAC3Q96MF2 364 aa29.3■■■□□ 2.28
ITSN2-204ENST00000407704 TRPM3Q9HCF6 1732 aaPredicted RBP29.3■■■□□ 2.28
ITSN2-204ENST00000407704 SLIT2O94813 1529 aa29.3■■■□□ 2.28
ITSN2-204ENST00000407704 GJD4Q96KN9 370 aaPredicted RBP29.29■■■□□ 2.28
ITSN2-204ENST00000407704 PLCH1Q4KWH8 1693 aa29.28■■■□□ 2.28
ITSN2-204ENST00000407704 UNC5CLQ8IV45 518 aa29.28■■■□□ 2.28
ITSN2-204ENST00000407704 ATAD2Q6PL18 1390 aa29.27■■■□□ 2.28
ITSN2-204ENST00000407704 TULP4Q9NRJ4 1543 aa29.27■■■□□ 2.28
ITSN2-204ENST00000407704 WASLO00401 505 aaPredicted RBP29.27■■■□□ 2.28
ITSN2-204ENST00000407704 GLI3P10071 1580 aa29.26■■■□□ 2.28
ITSN2-204ENST00000407704 ALS2Q96Q42 1657 aa29.24■■■□□ 2.27
ITSN2-204ENST00000407704 ARHGEF10O15013 1369 aa29.24■■■□□ 2.27
ITSN2-204ENST00000407704 RALGAPBQ86X10 1494 aa29.23■■■□□ 2.27
ITSN2-204ENST00000407704 BRWD3Q6RI45 1802 aa29.23■■■□□ 2.27
ITSN2-204ENST00000407704 EIF3AQ14152 1382 aaKnown RBP29.22■■■□□ 2.27
ITSN2-204ENST00000407704 NWD2Q9ULI1 1742 aa29.22■■■□□ 2.27
ITSN2-204ENST00000407704 KIAA1210Q9ULL0 1709 aa29.21■■■□□ 2.27
ITSN2-204ENST00000407704 ITSN1Q15811 1721 aa29.2■■■□□ 2.27
ITSN2-204ENST00000407704 GPRASP1Q5JY77 1395 aa29.19■■■□□ 2.26
ITSN2-204ENST00000407704 FAM83GA6ND36 823 aa29.17■■■□□ 2.26
ITSN2-204ENST00000407704 NGDNQ8NEJ9 315 aaKnown RBP29.17■■■□□ 2.26
ITSN2-204ENST00000407704 NBPF1Q3BBV0 1214 aa29.15■■■□□ 2.26
ITSN2-204ENST00000407704 ATP7BP35670 1465 aa29.15■■■□□ 2.26
ITSN2-204ENST00000407704 CRYBG1Q9Y4K1 1723 aa29.14■■■□□ 2.26
ITSN2-204ENST00000407704 EP400Q96L91 3159 aa29.14■■■□□ 2.26
ITSN2-204ENST00000407704 NUDT16Q96DE0 195 aaKnown RBP29.14■■■□□ 2.26
ITSN2-204ENST00000407704 PAK3O75914 559 aaPredicted RBP29.13■■■□□ 2.25
ITSN2-204ENST00000407704 VPS72Q15906 364 aa29.13■■■□□ 2.25
ITSN2-204ENST00000407704 CCDC9Q9Y3X0 531 aaKnown RBP29.13■■■□□ 2.25
ITSN2-204ENST00000407704 NRAPQ86VF7 1730 aa29.13■■■□□ 2.25
ITSN2-204ENST00000407704 CDK19Q9BWU1 502 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms