RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 KIF13AQ9H1H9 1805 aa28.03■■■□□ 2.08
CUEDC1-202ENST00000407144 COG6Q9Y2V7 657 aa28.03■■■□□ 2.08
CUEDC1-202ENST00000407144 ERBINQ96RT1 1412 aa28.02■■■□□ 2.08
CUEDC1-202ENST00000407144 SPINK5Q9NQ38 1064 aaPredicted RBP28.02■■■□□ 2.08
CUEDC1-202ENST00000407144 ANKRD50Q9ULJ7 1429 aa28■■■□□ 2.07
CUEDC1-202ENST00000407144 MCM5P33992 734 aa28■■■□□ 2.07
CUEDC1-202ENST00000407144 CCDC94Q9BW85 323 aaPredicted RBP28■■■□□ 2.07
CUEDC1-202ENST00000407144 RWDD1Q9H446 243 aaPredicted RBP27.99■■■□□ 2.07
CUEDC1-202ENST00000407144 PANK1Q8TE04 598 aa27.99■■■□□ 2.07
CUEDC1-202ENST00000407144 DIP2BQ9P265 1576 aa27.98■■■□□ 2.07
CUEDC1-202ENST00000407144 TMF1P82094 1093 aa27.97■■■□□ 2.07
CUEDC1-202ENST00000407144 CANXP27824 592 aaKnown RBP27.96■■■□□ 2.07
CUEDC1-202ENST00000407144 CLEC17AQ6ZS10 378 aa27.96■■■□□ 2.07
CUEDC1-202ENST00000407144 PCDHB15Q9Y5E8 787 aa27.96■■■□□ 2.07
CUEDC1-202ENST00000407144 ARHGAP31Q2M1Z3 1444 aa27.96■■■□□ 2.07
CUEDC1-202ENST00000407144 ABCC10Q5T3U5 1492 aa27.96■■■□□ 2.07
CUEDC1-202ENST00000407144 WDR7Q9Y4E6 1490 aa27.96■■■□□ 2.07
CUEDC1-202ENST00000407144 ITSN2Q9NZM3 1697 aa27.95■■■□□ 2.07
CUEDC1-202ENST00000407144 PDLIM2Q96JY6 352 aa27.95■■■□□ 2.06
CUEDC1-202ENST00000407144 ZHX1Q9UKY1 873 aaPredicted RBP27.95■■■□□ 2.06
CUEDC1-202ENST00000407144 NUP155O75694 1391 aa27.95■■■□□ 2.06
CUEDC1-202ENST00000407144 SASS6Q6UVJ0 657 aa27.94■■■□□ 2.06
CUEDC1-202ENST00000407144 ZSCAN20P17040 1043 aaPredicted RBP27.94■■■□□ 2.06
CUEDC1-202ENST00000407144 KLHL40Q2TBA0 621 aa27.94■■■□□ 2.06
CUEDC1-202ENST00000407144 RBM25P49756 843 aaKnown RBP27.93■■■□□ 2.06
CUEDC1-202ENST00000407144 MFAP1P55081 439 aaKnown RBP27.93■■■□□ 2.06
CUEDC1-202ENST00000407144 ZNF445P59923 1031 aa27.93■■■□□ 2.06
CUEDC1-202ENST00000407144 GTPBP4Q9BZE4 634 aaKnown RBP27.92■■■□□ 2.06
CUEDC1-202ENST00000407144 KIF20AO95235 890 aa27.92■■■□□ 2.06
CUEDC1-202ENST00000407144 TNNT2P45379 298 aaPredicted RBP27.92■■■□□ 2.06
CUEDC1-202ENST00000407144 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.92■■■□□ 2.06
CUEDC1-202ENST00000407144 GOLGA6L22H0YM25 854 aa27.91■■■□□ 2.06
CUEDC1-202ENST00000407144 FAM69CQ0P6D2 419 aa27.91■■■□□ 2.06
CUEDC1-202ENST00000407144 APAF1O14727 1248 aa27.89■■■□□ 2.06
CUEDC1-202ENST00000407144 ZKSCAN5Q9Y2L8 839 aa27.89■■■□□ 2.06
CUEDC1-202ENST00000407144 KNSTRNQ9Y448 316 aa27.89■■■□□ 2.06
CUEDC1-202ENST00000407144 FAM135AQ9P2D6 1515 aa27.89■■■□□ 2.05
CUEDC1-202ENST00000407144 MAGI2Q86UL8 1455 aa27.88■■■□□ 2.05
CUEDC1-202ENST00000407144 AMER1Q5JTC6 1135 aaPredicted RBP27.88■■■□□ 2.05
CUEDC1-202ENST00000407144 NPC1L1Q9UHC9 1359 aa27.87■■■□□ 2.05
CUEDC1-202ENST00000407144 NBPF1Q3BBV0 1214 aa27.86■■■□□ 2.05
CUEDC1-202ENST00000407144 EIF2AK4Q9P2K8 1649 aaKnown RBP27.86■■■□□ 2.05
CUEDC1-202ENST00000407144 XPCQ01831 940 aaPredicted RBP27.85■■■□□ 2.05
CUEDC1-202ENST00000407144 PRDM10Q9NQV6 1147 aa27.85■■■□□ 2.05
CUEDC1-202ENST00000407144 TSPOAP1O95153 1857 aa27.85■■■□□ 2.05
CUEDC1-202ENST00000407144 HSP90AB1P08238 724 aaKnown RBP27.84■■■□□ 2.05
CUEDC1-202ENST00000407144 CCDC146Q8IYE0 955 aa27.83■■■□□ 2.05
CUEDC1-202ENST00000407144 BBXQ8WY36 941 aaPredicted RBP27.83■■■□□ 2.05
CUEDC1-202ENST00000407144 SHANK2Q9UPX8 1470 aa27.82■■■□□ 2.04
CUEDC1-202ENST00000407144 ASXL1Q8IXJ9 1541 aa27.82■■■□□ 2.04
CUEDC1-202ENST00000407144 LETM1O95202 739 aaPredicted RBP27.82■■■□□ 2.04
CUEDC1-202ENST00000407144 CFDP1Q9UEE9 299 aaPredicted RBP27.81■■■□□ 2.04
CUEDC1-202ENST00000407144 DDX49Q9Y6V7 483 aaKnown RBP27.81■■■□□ 2.04
CUEDC1-202ENST00000407144 PLEKHD1A6NEE1 506 aa27.8■■■□□ 2.04
CUEDC1-202ENST00000407144 RARSP54136 660 aaKnown RBP27.8■■■□□ 2.04
CUEDC1-202ENST00000407144 PPP4R3BQ5MIZ7 849 aa27.8■■■□□ 2.04
CUEDC1-202ENST00000407144 SYNMO15061 1565 aa27.79■■■□□ 2.04
CUEDC1-202ENST00000407144 GTF2E1P29083 439 aaPredicted RBP27.79■■■□□ 2.04
CUEDC1-202ENST00000407144 DMRT2Q9Y5R5 561 aa27.79■■■□□ 2.04
CUEDC1-202ENST00000407144 GLI2P10070 1586 aa27.78■■■□□ 2.04
CUEDC1-202ENST00000407144 GPATCH8Q9UKJ3 1502 aaKnown RBP27.77■■■□□ 2.04
CUEDC1-202ENST00000407144 CCDC39Q9UFE4 941 aa27.77■■■□□ 2.04
CUEDC1-202ENST00000407144 STAC3Q96MF2 364 aa27.76■■■□□ 2.03
CUEDC1-202ENST00000407144 MAP3K4Q9Y6R4 1608 aa27.76■■■□□ 2.03
CUEDC1-202ENST00000407144 RLBP1P12271 317 aa27.76■■■□□ 2.03
CUEDC1-202ENST00000407144 MYRIPQ8NFW9 859 aa27.75■■■□□ 2.03
CUEDC1-202ENST00000407144 CCDC141Q6ZP82 1450 aa27.75■■■□□ 2.03
CUEDC1-202ENST00000407144 A2MP01023 1474 aa27.74■■■□□ 2.03
CUEDC1-202ENST00000407144 PPRC1Q5VV67 1664 aaKnown RBP27.74■■■□□ 2.03
CUEDC1-202ENST00000407144 BAG4O95429 457 aaKnown RBP27.74■■■□□ 2.03
CUEDC1-202ENST00000407144 TROQ12816 1431 aaPredicted RBP27.74■■■□□ 2.03
CUEDC1-202ENST00000407144 WWC1Q8IX03 1113 aa27.73■■■□□ 2.03
CUEDC1-202ENST00000407144 TAF3Q5VWG9 929 aa27.73■■■□□ 2.03
CUEDC1-202ENST00000407144 HDAC1Q13547 482 aaPredicted RBP27.72■■■□□ 2.03
CUEDC1-202ENST00000407144 TTC37Q6PGP7 1564 aa27.72■■■□□ 2.03
CUEDC1-202ENST00000407144 RBSNQ9H1K0 784 aa27.72■■■□□ 2.03
CUEDC1-202ENST00000407144 ABCA9Q8IUA7 1624 aa27.71■■■□□ 2.03
CUEDC1-202ENST00000407144 K7ELQ4 463 aaPredicted RBP27.71■■■□□ 2.03
CUEDC1-202ENST00000407144 ZSCAN23Q3MJ62 389 aa27.71■■■□□ 2.03
CUEDC1-202ENST00000407144 RNF17Q9BXT8 1623 aaKnown RBP27.71■■■□□ 2.03
CUEDC1-202ENST00000407144 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.71■■■□□ 2.03
CUEDC1-202ENST00000407144 SSFA2P28290 1259 aa27.7■■■□□ 2.03
CUEDC1-202ENST00000407144 MVPQ14764 893 aaKnown RBP27.7■■■□□ 2.02
CUEDC1-202ENST00000407144 PRIMPOLQ96LW4 560 aa27.7■■■□□ 2.02
CUEDC1-202ENST00000407144 GTF2F1P35269 517 aaKnown RBP eCLIP27.69■■■□□ 2.02
CUEDC1-202ENST00000407144 ARID3AQ99856 593 aa27.69■■■□□ 2.02
CUEDC1-202ENST00000407144 CDCA8Q53HL2 280 aa27.69■■■□□ 2.02
CUEDC1-202ENST00000407144 C9orf84Q5VXU9 1444 aa27.67■■■□□ 2.02
CUEDC1-202ENST00000407144 HMGN5P82970 282 aaKnown RBP27.66■■■□□ 2.02
CUEDC1-202ENST00000407144 KIF2CQ99661 725 aa27.66■■■□□ 2.02
CUEDC1-202ENST00000407144 CD109Q6YHK3 1445 aa27.66■■■□□ 2.02
CUEDC1-202ENST00000407144 KANK1Q14678 1352 aa27.65■■■□□ 2.02
CUEDC1-202ENST00000407144 PDIA4P13667 645 aaKnown RBP27.63■■■□□ 2.01
CUEDC1-202ENST00000407144 TNNQ9UQP3 1299 aa27.63■■■□□ 2.01
CUEDC1-202ENST00000407144 CAVIN1Q6NZI2 390 aaKnown RBP27.62■■■□□ 2.01
CUEDC1-202ENST00000407144 NAP1L2Q9ULW6 460 aaPredicted RBP27.62■■■□□ 2.01
CUEDC1-202ENST00000407144 MYO5CQ9NQX4 1742 aa27.62■■■□□ 2.01
CUEDC1-202ENST00000407144 KIAA2012Q0VF49 1180 aa27.62■■■□□ 2.01
CUEDC1-202ENST00000407144 LMBRD1Q9NUN5 540 aa27.62■■■□□ 2.01
CUEDC1-202ENST00000407144 PRIM1P49642 420 aaKnown RBP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms